iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dno-029887

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain 76 (Predicted)

Genbank Nucleotide ID

DP001097

Gene Name

RFWD2; WDR76

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDNOG00000018556.3	ENSDNOT00000018556.3	ENSDNOP00000014407.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.2	139	177
E3 adaptor/Cullin RING/DCX/DWD	8.40e-24	83.0	473	502

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++++++  + + CgH f+ +C+++          + rCP C+
   Q: 139  CPICFDMIEE-AYMTKCGHSFCYKCIHQS------LEDNNRCPKCN 177
           ********99.888***********9555......999999****6 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWD 29
           +++++c+++     +ll+s+ + gt+ +WD
   Q: 473  NSKISCISWssYHkNLLASSDYEGTVILWD 502
           689******9622599************** PP

Organism

Dasypus novemcinctus

Protein Sequence
(Fasta)

MSGSRQAGSG SAGTSPGSSA ASSVTSASSS LSSSPSPPSV AAAAALVSGG AAQAAGSGGL 60
GGPVRPVLVA AAVSGSGAGS GGGAVSAGLS RLSCAARPSA GVGGSSSSLG SGSRKRPLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCTCCCGG CGCGCGGGGG TTGGCGGCGG CTGGGACCGC GGCGGCGGCG GCGGCGGCCT 60
CGAGAGCGGT AGTGGTTCCT ACTCTCCTTT ATTAGTTTCC TCCGCCCCCT CCCATCGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0006974--P:cellular response to DNA damage stimulus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	39.57	1.00e-125	443.00
IUUC-Aml-001265	Ailuropoda melanoleuca	99.03	0.00e+00	1241.00
IUUC-Atr-002460	Amborella trichopoda	38.83	1.00e-125	443.00
IUUC-Apl-003796	Anas platyrhynchos	97.76	0.00e+00	1152.00
IUUC-Aca-005078	Anolis carolinensis	97.26	0.00e+00	1209.00
IUUC-Aly-006014	Arabidopsis lyrata	39.42	2.00e-130	459.00
IUUC-Ath-007636	Arabidopsis thaliana	39.48	4.00e-130	458.00
IUUC-Ame-011176	Astyanax mexicanus	95.87	8.00e-69	254.00
IUUC-Bta-012595	Bos taurus	98.76	0.00e+00	1256.00
IUUC-Bdi-014152	Brachypodium distachyon	38.92	1.00e-128	454.00
IUUC-Bol-016380	Brassica oleracea	40.21	7.00e-131	461.00
IUUC-Bra-017690	Brassica rapa	39.09	9.00e-126	444.00
IUUC-Cja-018926	Callithrix jacchus	98.60	0.00e+00	1249.00
IUUC-Cfa-021088	Canis familiaris	98.76	0.00e+00	1258.00
IUUC-Cpo-022442	Cavia porcellus	97.63	0.00e+00	1218.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.45	3.00e-33	135.00
IUUC-Csa-024119	Chlorocebus sabaeus	96.92	0.00e+00	1241.00
IUUC-Cho-024883	Choloepus hoffmanni	86.89	3.00e-106	379.00
IUUC-Cin-025375	Ciona intestinalis	56.03	0.00e+00	683.00
IUUC-Cme-027350	Cyanidioschyzon merolae	41.69	2.00e-79	290.00
IUUC-Dre-028453	Danio rerio	87.88	0.00e+00	1085.00
IUUC-Dor-031110	Dipodomys ordii	80.00	0.00e+00	923.00
IUUC-Ete-033016	Echinops telfairi	84.34	0.00e+00	1040.00
IUUC-Eca-034403	Equus caballus	98.79	0.00e+00	1156.00
IUUC-Eeu-034690	Erinaceus europaeus	81.68	0.00e+00	957.00
IUUC-Fca-036475	Felis catus	98.10	0.00e+00	1156.00
IUUC-Fal-037189	Ficedula albicollis	98.32	0.00e+00	1189.00
IUUC-Gmo-039245	Gadus morhua	86.62	0.00e+00	1055.00
IUUC-Gga-040806	Gallus gallus	98.23	0.00e+00	1238.00
IUUC-Gac-042177	Gasterosteus aculeatus	88.16	0.00e+00	1106.00
IUUC-Gma-044187	Glycine max	40.43	8.00e-127	447.00
IUUC-Ggo-044430	Gorilla gorilla	97.46	0.00e+00	922.00
IUUC-Hsa-045853	Homo sapiens	98.60	0.00e+00	1248.00
IUUC-Hvu-047750	Hordeum vulgare	38.09	1.00e-94	341.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	99.58	1.00e-144	504.00
IUUC-Lch-050420	Latimeria chalumnae	92.04	0.00e+00	1150.00
IUUC-Lpe-051219	Leersia perrieri	38.54	3.00e-124	439.00
IUUC-Loc-052728	Lepisosteus oculatus	91.45	0.00e+00	1105.00
IUUC-Laf-053775	Loxodonta africana	98.28	0.00e+00	1255.00
IUUC-Meu-056595	Macropus eugenii	77.00	2.00e-174	606.00
IUUC-Mtr-058555	Medicago truncatula	39.88	5.00e-135	474.00
IUUC-Mga-059646	Meleagris gallopavo	97.43	0.00e+00	1151.00
IUUC-Mmr-060990	Microcebus murinus	98.59	0.00e+00	1249.00
IUUC-Mdo-062287	Monodelphis domestica	98.55	0.00e+00	1243.00
IUUC-Mmu-064097	Mus musculus	98.45	0.00e+00	1255.00
IUUC-Mac-065240	Musa acuminata	41.01	3.00e-136	478.00
IUUC-Mpu-066612	Mustela putorius furo	98.11	0.00e+00	1158.00
IUUC-Mlu-067967	Myotis lucifugus	96.31	0.00e+00	1158.00
IUUC-Nle-069543	Nomascus leucogenys	98.76	0.00e+00	1254.00
IUUC-Opr-070366	Ochotona princeps	82.71	0.00e+00	706.00
IUUC-Ont-071522	Oreochromis niloticus	87.84	0.00e+00	1094.00
IUUC-Oan-073409	Ornithorhynchus anatinus	97.94	0.00e+00	1152.00
IUUC-Ocu-073756	Oryctolagus cuniculus	98.40	0.00e+00	1223.00
IUUC-Oba-075149	Oryza barthii	38.98	8.00e-127	448.00
IUUC-Obr-076563	Oryza brachyantha	39.17	2.00e-127	449.00
IUUC-Ogl-077701	Oryza glaberrima	38.96	2.00e-127	449.00
IUUC-Ogu-078383	Oryza glumaepatula	38.96	2.00e-127	449.00
IUUC-Oin-079965	Oryza indica	36.80	2.00e-113	403.00
IUUC-Olo-080639	Oryza longistaminata	38.86	4.00e-125	442.00
IUUC-Ome-081821	Oryza meridionalis	38.70	5.00e-115	409.00
IUUC-Oni-082622	Oryza nivara	38.96	2.00e-127	449.00
IUUC-Opu-083295	Oryza punctata	38.96	3.00e-127	448.00
IUUC-Oru-084661	Oryza rufipogon	38.96	2.00e-127	449.00
IUUC-Osa-085766	Oryza sativa	38.96	2.00e-127	449.00
IUUC-Ola-086727	Oryzias latipes	87.82	0.00e+00	1112.00
IUUC-Olu-087702	Ostreococcus lucimarinus	42.99	3.00e-69	254.00
IUUC-Oga-088215	Otolemur garnettii	96.73	0.00e+00	1228.00
IUUC-Oar-089880	Ovis aries	98.73	0.00e+00	1224.00
IUUC-Ptr-090597	Pan troglodytes	98.60	0.00e+00	1248.00
IUUC-Pan-091987	Papio anubis	98.76	0.00e+00	1254.00
IUUC-Psi-094033	Pelodiscus sinensis	97.63	0.00e+00	1163.00
IUUC-Pma-094587	Petromyzon marinus	70.56	0.00e+00	807.00
IUUC-Ppa-095256	Physcomitrella patens	39.52	7.00e-133	468.00
IUUC-Pfo-097388	Poecilia formosa	86.84	0.00e+00	1072.00
IUUC-Pab-098029	Pongo abelii	98.60	0.00e+00	1251.00
IUUC-Pop-099319	Populus trichocarpa	39.23	1.00e-130	460.00
IUUC-Pca-100846	Procavia capensis	90.48	0.00e+00	1139.00
IUUC-Ppe-101250	Prunus persica	38.50	2.00e-120	426.00
IUUC-Pva-102407	Pteropus vampyrus	98.29	0.00e+00	1242.00
IUUC-Rno-105312	Rattus norvegicus	98.29	0.00e+00	1251.00
IUUC-Sha-106514	Sarcophilus harrisii	98.39	0.00e+00	766.00
IUUC-Smo-109418	Selaginella moellendorffii	39.88	7.00e-130	457.00
IUUC-Sit-110248	Setaria italica	39.51	5.00e-128	451.00
IUUC-Sly-110964	Solanum lycopersicum	40.34	1.00e-130	460.00
IUUC-Stu-112882	Solanum tuberosum	40.58	3.00e-131	462.00
IUUC-Sar-113230	Sorex araneus	71.53	0.00e+00	794.00
IUUC-Sbi-113962	Sorghum bicolor	37.04	2.00e-122	433.00
IUUC-Ssc-115987	Sus scrofa	97.93	5.00e-178	616.00
IUUC-Tgu-116471	Taeniopygia guttata	98.22	0.00e+00	1232.00
IUUC-Tru-118231	Takifugu rubripes	87.84	0.00e+00	1059.00
IUUC-Tsy-119415	Tarsius syrichta	98.15	0.00e+00	1165.00
IUUC-Tni-120893	Tetraodon nigroviridis	88.01	0.00e+00	1066.00
IUUC-Tca-121703	Theobroma cacao	41.67	2.00e-130	459.00
IUUC-Tae-125317	Triticum aestivum	40.62	1.00e-133	470.00
IUUC-Tur-126557	Triticum urartu	40.25	9.00e-129	453.00
IUUC-Tbe-127253	Tupaia belangeri	71.32	0.00e+00	850.00
IUUC-Ttr-129100	Tursiops truncatus	96.81	0.00e+00	1135.00
IUUC-Vpa-130613	Vicugna pacos	92.10	0.00e+00	1090.00
IUUC-Vvi-130880	Vitis vinifera	41.06	3.00e-124	438.00
IUUC-Xtr-132033	Xenopus tropicalis	95.17	0.00e+00	1231.00
IUUC-Xma-133421	Xiphophorus maculatus	86.68	0.00e+00	1071.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence