iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016159

Ensembl Protein ID

Bo3g009380.1

UniProt Accession

A0A0D3B105; A0A0D3B105_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g009380	Bo3g009380.1	Bo3g009380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	4.30e-140	467.8	166	466
E3 adaptor/Cullin RING/DCX/DWD	9.30e-25	87.1	300	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsa 97
           p+kvldap+l+ddfyln++dWss+nvlav+Lg++vylwsa++++v+kl+dl ++d+v+s++w++eg++++vGt++g+v+++D +++k+vrt+ gh++
   Q: 166  PHKVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPNDSVCSLQWTREGSYISVGTSHGQVQVWDGTQCKRVRTMGGHQT 262
           689********************************************************************************************** PP
   S: 98   rvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqksl 194
           r g L+Wn+ +lssGsrd++il++d+rv+   +s+l +h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ k +eh+aavkai+wsP+q+sl
   Q: 263  RTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSL 359
           ************************************************************************************************* PP
   S: 195  LasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetl 291
            asGGGtaDrci+fwnt++g++l++idtgsqvc+l+wsk+ +e+vsthG+++n+i+lwkyps++kva+l+gh++Rvl+la spdg++ivt+agDetl
   Q: 360  FASGGGTADRCIRFWNTTNGHQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMAKVATLTGHSMRVLYLATSPDGQTIVTGAGDETL 456
           ************************************************************************************************* PP
   S: 292  rfwklfdkkk 301
           rfw++f + k
   Q: 457  RFWNVFPSVK 466
           ******7655 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH+++v++l++ +d + l+sG++D+++ vW+ +++
   Q: 300  GHKSEVCGLKWsHDdRELASGGNDNQLLVWNNHSQ 334
           8***********55599**************8776 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MESPQKTKTG LNLPAGMNQT SLRLETFSSS FRGISTLSSP SKSTCSDRFI PCRSSSRLHA 60
FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFVSNSLSP AGGGGGQGSA SSPMSPCTSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAATCCC CACAGAAAAC CAAAACCGGC TTGAACCTCC CCGCGGGGAT GAACCAGACC 60
TCGCTACGTC TCGAGACGTT CTCGAGCTCG TTCCGCGGGA TCTCGACCTT ATCCTCTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	70.35	0.00e+00	641.00
IUUC-Aly-006009	Arabidopsis lyrata	94.85	0.00e+00	813.00
IUUC-Ath-007167	Arabidopsis thaliana	94.85	0.00e+00	800.00
IUUC-Bdi-015033	Brachypodium distachyon	64.23	3.00e-176	610.00
IUUC-Bra-017745	Brassica rapa	97.94	0.00e+00	834.00
IUUC-Gma-043563	Glycine max	74.49	0.00e+00	698.00
IUUC-Hvu-047486	Hordeum vulgare	81.69	4.00e-150	523.00
IUUC-Lpe-051568	Leersia perrieri	68.52	5.00e-158	550.00
IUUC-Mtr-057760	Medicago truncatula	75.96	0.00e+00	694.00
IUUC-Mac-064942	Musa acuminata	71.37	0.00e+00	640.00
IUUC-Oba-075417	Oryza barthii	80.06	8.00e-155	540.00
IUUC-Obr-076033	Oryza brachyantha	71.49	2.00e-176	611.00
IUUC-Ogl-077441	Oryza glaberrima	64.90	5.00e-179	620.00
IUUC-Ogu-078877	Oryza glumaepatula	62.65	1.00e-169	589.00
IUUC-Oin-079461	Oryza indica	66.22	5.00e-168	583.00
IUUC-Olo-080716	Oryza longistaminata	66.28	4.00e-162	564.00
IUUC-Ome-081663	Oryza meridionalis	63.96	2.00e-171	595.00
IUUC-Oni-083097	Oryza nivara	62.86	4.00e-170	590.00
IUUC-Opu-083464	Oryza punctata	62.65	5.00e-169	587.00
IUUC-Oru-084848	Oryza rufipogon	62.86	4.00e-170	590.00
IUUC-Osa-085451	Oryza sativa	64.90	5.00e-179	620.00
IUUC-Pop-099269	Populus trichocarpa	77.06	0.00e+00	693.00
IUUC-Ppe-101285	Prunus persica	81.89	0.00e+00	734.00
IUUC-Sit-110550	Setaria italica	67.56	5.00e-178	617.00
IUUC-Sly-111395	Solanum lycopersicum	74.51	0.00e+00	677.00
IUUC-Stu-112356	Solanum tuberosum	74.71	0.00e+00	681.00
IUUC-Sbi-114386	Sorghum bicolor	67.68	2.00e-177	615.00
IUUC-Tsy-118931	Tarsius syrichta	39.25	4.00e-58	218.00
IUUC-Tca-121682	Theobroma cacao	79.56	0.00e+00	711.00
IUUC-Tae-123028	Triticum aestivum	67.84	0.00e+00	628.00
IUUC-Tur-126545	Triticum urartu	74.84	5.00e-137	480.00
IUUC-Vpa-130775	Vicugna pacos	38.83	9.00e-56	211.00
IUUC-Vvi-131748	Vitis vinifera	79.42	0.00e+00	732.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence