iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022563

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Nucleosome remodeling factor

Genbank Nucleotide ID

DS496138

Gene Name

CHLREDRAFT_131412

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_131412	EDP00599	EDP00599

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-33	112.9	316	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+d+v+ + +   ++t l+s++ D  ++vWDl++  +++
   Q: 316  GHADEVFQIGWspkNETVLASCGADRRVMVWDLSRIGDEQ 355
           8***********9666****************98877766 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MGRDDEDYPD EVEERLTNEE YKIWKKNTPF LYDLVVTHAL EWPSLTVQWL PDKEITAGKD 60
YSKQKLILGT HTSDNEQNYL MIAEVQLPLE ESELDGRGFD DERNEVGGFG GAHGKVHVIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGTATCTC ACACGCTTGG CTAGCCATTT GACAGCACCT CGAGGTGTAT TAGGTGCCCA 60
CCCAGCTGCG CAGCATCAAG GCAACCCCAG GGGGCTCGCA GCAGAGGCGC CAGCTGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

cre:CHLREDRAFT_131412

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	60.33	2.00e-145	506.00
IUUC-Aml-001339	Ailuropoda melanoleuca	62.41	6.00e-154	535.00
IUUC-Atr-003075	Amborella trichopoda	70.81	0.00e+00	625.00
IUUC-Apl-003952	Anas platyrhynchos	62.90	2.00e-157	546.00
IUUC-Aca-004508	Anolis carolinensis	62.90	2.00e-157	546.00
IUUC-Aly-006342	Arabidopsis lyrata	69.08	9.00e-174	600.00
IUUC-Ath-006855	Arabidopsis thaliana	69.08	2.00e-173	600.00
IUUC-Ago-007892	Ashbya gossypii	37.28	2.00e-77	281.00
IUUC-Acl-008163	Aspergillus clavatus	49.75	3.00e-115	406.00
IUUC-Afl-008645	Aspergillus flavus	49.25	3.00e-114	403.00
IUUC-Afu-009091	Aspergillus fumigatus	49.24	4.00e-113	399.00
IUUC-Ani-009478	Aspergillus nidulans	47.47	2.00e-99	353.00
IUUC-Ang-009707	Aspergillus niger	49.24	1.00e-111	394.00
IUUC-Aor-010028	Aspergillus oryzae	49.25	3.00e-114	403.00
IUUC-Ate-010416	Aspergillus terreus	48.99	9.00e-115	404.00
IUUC-Ame-010598	Astyanax mexicanus	62.08	4.00e-157	545.00
IUUC-Bgr-012001	Blumeria graminis	42.72	1.00e-92	332.00
IUUC-Bta-012851	Bos taurus	62.08	8.00e-158	548.00
IUUC-Bci-013815	Botrytis cinerea	46.81	5.00e-115	405.00
IUUC-Bdi-014926	Brachypodium distachyon	69.15	6.00e-170	588.00
IUUC-Bol-015856	Brassica oleracea	67.46	2.00e-171	594.00
IUUC-Bra-016725	Brassica rapa	66.18	6.00e-171	591.00
IUUC-Cel-018587	Caenorhabditis elegans	59.95	1.00e-141	494.00
IUUC-Cja-019884	Callithrix jacchus	62.08	8.00e-158	548.00
IUUC-Cfa-020343	Canis familiaris	62.08	8.00e-158	548.00
IUUC-Cpo-021591	Cavia porcellus	62.08	8.00e-158	548.00
IUUC-Csa-023738	Chlorocebus sabaeus	60.49	1.00e-151	527.00
IUUC-Cho-024506	Choloepus hoffmanni	62.08	6.00e-156	541.00
IUUC-Cin-025589	Ciona intestinalis	62.74	1.00e-156	543.00
IUUC-Csv-026216	Ciona savignyi	62.14	2.00e-157	546.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	43.77	1.00e-104	371.00
IUUC-Cne-026792	Cryptococcus neoformans	49.49	4.00e-120	422.00
IUUC-Cme-027307	Cyanidioschyzon merolae	52.55	4.00e-129	452.00
IUUC-Dre-028742	Danio rerio	61.59	2.00e-156	543.00
IUUC-Dno-029114	Dasypus novemcinctus	62.08	8.00e-158	548.00
IUUC-Dor-030733	Dipodomys ordii	53.92	1.00e-126	444.00
IUUC-Dse-031282	Dothistroma septosporum	42.16	3.00e-95	340.00
IUUC-Dme-032126	Drosophila melanogaster	62.35	1.00e-157	547.00
IUUC-Ete-032731	Echinops telfairi	62.08	8.00e-158	548.00
IUUC-Eca-033533	Equus caballus	61.67	2.00e-152	530.00
IUUC-Eeu-034644	Erinaceus europaeus	55.66	4.00e-71	259.00
IUUC-Fca-036202	Felis catus	62.08	8.00e-158	548.00
IUUC-Fal-037084	Ficedula albicollis	62.90	2.00e-157	546.00
IUUC-Fox-037974	Fusarium oxysporum	45.50	2.00e-110	390.00
IUUC-Fso-038246	Fusarium solani	43.98	2.00e-97	347.00
IUUC-Gmo-039214	Gadus morhua	62.41	2.00e-157	546.00
IUUC-Ggr-039741	Gaeumannomyces graminis	44.23	5.00e-99	352.00
IUUC-Gga-040396	Gallus gallus	62.08	8.00e-158	548.00
IUUC-Gac-042627	Gasterosteus aculeatus	62.14	1.00e-155	541.00
IUUC-Gma-042791	Glycine max	68.83	2.00e-170	590.00
IUUC-Ggo-045422	Gorilla gorilla	58.19	4.00e-138	482.00
IUUC-Hsa-045683	Homo sapiens	62.08	8.00e-158	548.00
IUUC-Hvu-047457	Hordeum vulgare	66.32	3.00e-74	268.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	62.08	8.00e-158	548.00
IUUC-Kpa-049119	Komagataella pastoris	35.29	3.00e-68	250.00
IUUC-Lch-050545	Latimeria chalumnae	62.90	4.00e-157	545.00
IUUC-Lpe-051337	Leersia perrieri	69.75	5.00e-171	592.00
IUUC-Loc-052473	Lepisosteus oculatus	61.59	6.00e-157	545.00
IUUC-Lma-053275	Leptosphaeria maculans	42.52	1.00e-65	241.00
IUUC-Laf-054114	Loxodonta africana	62.08	8.00e-158	548.00
IUUC-Mcc-055648	Macaca mulatta	62.77	3.00e-158	549.00
IUUC-Meu-056490	Macropus eugenii	62.08	8.00e-158	548.00
IUUC-Mor-056947	Magnaporthe oryzae	45.34	1.00e-100	357.00
IUUC-Mpo-057602	Magnaporthe poae	45.59	1.00e-100	357.00
IUUC-Mtr-057853	Medicago truncatula	70.71	1.00e-169	587.00
IUUC-Mla-058884	Melampsora laricipopulina	50.61	5.00e-127	445.00
IUUC-Mga-059452	Meleagris gallopavo	62.90	1.00e-157	547.00
IUUC-Mvi-060450	Microbotryum violaceum	56.90	5.00e-134	469.00
IUUC-Mmr-060678	Microcebus murinus	62.94	4.00e-155	539.00
IUUC-Mdo-062450	Monodelphis domestica	62.07	2.00e-154	536.00
IUUC-Mmu-063282	Mus musculus	62.08	8.00e-158	548.00
IUUC-Mac-065480	Musa acuminata	69.47	2.00e-171	593.00
IUUC-Mpu-066529	Mustela putorius furo	61.35	5.00e-156	541.00
IUUC-Mlu-068072	Myotis lucifugus	62.08	8.00e-158	548.00
IUUC-Nfi-068374	Neosartorya fischeri	49.49	8.00e-111	392.00
IUUC-Ncr-068794	Neurospora crassa	46.00	4.00e-110	389.00
IUUC-Nle-069577	Nomascus leucogenys	62.08	8.00e-158	548.00
IUUC-Opr-070245	Ochotona princeps	50.48	2.00e-117	413.00
IUUC-Ont-071809	Oreochromis niloticus	62.08	3.00e-157	546.00
IUUC-Oan-072839	Ornithorhynchus anatinus	62.75	3.00e-156	542.00
IUUC-Ocu-074778	Oryctolagus cuniculus	60.49	2.00e-151	527.00
IUUC-Oba-075719	Oryza barthii	58.75	2.00e-141	494.00
IUUC-Obr-076859	Oryza brachyantha	69.58	4.00e-169	585.00
IUUC-Ogl-077920	Oryza glaberrima	70.00	4.00e-171	592.00
IUUC-Ogu-078048	Oryza glumaepatula	58.75	3.00e-141	493.00
IUUC-Oin-079960	Oryza indica	54.04	7.00e-128	448.00
IUUC-Olo-080553	Oryza longistaminata	56.32	1.00e-137	481.00
IUUC-Ome-081835	Oryza meridionalis	70.00	7.00e-172	595.00
IUUC-Oni-082494	Oryza nivara	58.51	1.00e-139	488.00
IUUC-Opu-083913	Oryza punctata	67.50	2.00e-160	556.00
IUUC-Oru-084666	Oryza rufipogon	70.00	4.00e-171	592.00
IUUC-Osa-085884	Oryza sativa	70.00	4.00e-171	592.00
IUUC-Ola-086664	Oryzias latipes	62.29	7.00e-157	545.00
IUUC-Olu-087579	Ostreococcus lucimarinus	71.67	2.00e-168	583.00
IUUC-Oga-088364	Otolemur garnettii	58.31	6.00e-145	505.00
IUUC-Oar-089652	Ovis aries	62.08	8.00e-158	548.00
IUUC-Ptr-091598	Pan troglodytes	60.54	3.00e-151	526.00
IUUC-Pan-092412	Papio anubis	60.49	1.00e-151	527.00
IUUC-Psi-093300	Pelodiscus sinensis	61.48	1.00e-142	497.00
IUUC-Pma-094307	Petromyzon marinus	61.23	2.00e-153	533.00
IUUC-Pno-095153	Phaeosphaeria nodorum	45.63	4.00e-104	369.00
IUUC-Ppa-095800	Physcomitrella patens	72.18	1.00e-178	617.00
IUUC-Pfo-097240	Poecilia formosa	61.61	2.00e-155	540.00
IUUC-Pab-097697	Pongo abelii	62.08	8.00e-158	548.00
IUUC-Pop-099709	Populus trichocarpa	68.66	4.00e-176	608.00
IUUC-Pca-100642	Procavia capensis	54.81	6.00e-130	455.00
IUUC-Ppe-101212	Prunus persica	69.71	3.00e-174	602.00
IUUC-Pva-102253	Pteropus vampyrus	62.08	8.00e-158	548.00
IUUC-Pgr-103441	Puccinia graminis	49.26	8.00e-119	418.00
IUUC-Pte-104332	Pyrenophora teres	44.85	1.00e-103	367.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	44.85	2.00e-103	367.00
IUUC-Rno-105678	Rattus norvegicus	62.08	8.00e-158	548.00
IUUC-Sce-106364	Saccharomyces cerevisiae	38.35	2.00e-69	254.00
IUUC-Sha-106663	Sarcophilus harrisii	62.90	2.00e-157	546.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	47.39	2.00e-105	374.00
IUUC-Spo-108145	Schizosaccharomyces pombe	50.25	4.00e-114	402.00
IUUC-Smo-109159	Selaginella moellendorffii	71.53	1.00e-176	610.00
IUUC-Sit-110144	Setaria italica	68.91	2.00e-164	570.00
IUUC-Sly-111680	Solanum lycopersicum	69.23	8.00e-176	607.00
IUUC-Stu-111931	Solanum tuberosum	70.24	1.00e-175	607.00
IUUC-Sar-113236	Sorex araneus	54.79	3.00e-128	449.00
IUUC-Sbi-114637	Sorghum bicolor	68.91	3.00e-170	589.00
IUUC-Sre-114980	Sporisorium reilianum	53.51	1.00e-138	484.00
IUUC-Ssc-116352	Sus scrofa	60.93	1.00e-151	527.00
IUUC-Tgu-116925	Taeniopygia guttata	62.65	3.00e-157	545.00
IUUC-Tru-117549	Takifugu rubripes	61.78	2.00e-154	536.00
IUUC-Tsy-118854	Tarsius syrichta	60.69	7.00e-151	525.00
IUUC-Tni-120398	Tetraodon nigroviridis	62.02	3.00e-156	542.00
IUUC-Tca-121841	Theobroma cacao	68.75	8.00e-173	597.00
IUUC-Tre-122190	Trichoderma reesei	45.99	9.00e-102	361.00
IUUC-Tvi-122304	Trichoderma virens	45.65	7.00e-112	395.00
IUUC-Tae-124648	Triticum aestivum	68.91	3.00e-163	566.00
IUUC-Tur-126850	Triticum urartu	64.87	5.00e-120	422.00
IUUC-Tme-126949	Tuber melanosporum	50.88	5.00e-120	422.00
IUUC-Tbe-128010	Tupaia belangeri	54.05	2.00e-129	454.00
IUUC-Ttr-128558	Tursiops truncatus	55.64	2.00e-132	463.00
IUUC-Uma-129424	Ustilago maydis	53.51	2.00e-138	483.00
IUUC-Vda-129873	Verticillium dahliae	46.92	2.00e-112	397.00
IUUC-Vpa-130079	Vicugna pacos	61.84	4.00e-156	542.00
IUUC-Vvi-131585	Vitis vinifera	69.71	4.00e-175	605.00
IUUC-Xtr-132005	Xenopus tropicalis	62.10	7.00e-155	538.00
IUUC-Xma-133066	Xiphophorus maculatus	62.08	3.00e-157	546.00
IUUC-Yli-134334	Yarrowia lipolytica	36.71	1.00e-73	268.00
IUUC-Zma-135873	Zea mays	69.15	2.00e-164	569.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence