iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018487

Ensembl Protein ID

F53C11.7.1

UniProt Accession

Q93759; Q93759_CAEEL

Genbank Protein ID

CAB02116.2

Protein Name

Seven WD repeats, AN11 family

Genbank Nucleotide ID

BX284605

Gene Name

swan-2; CELE_F53C11.7; F53C11.7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00009976	F53C11.7.1	F53C11.7.1

Annotation

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-16	59.7	401	434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H++ +++l++   s+ ++++++dD +  +WD+++
   Q: 401  HEATINGLSWaphSGSHICTAGDDYQALIWDVHE 434
           99*********85449***************975 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MIDQSQAAPS SSTSSSHLMH HHSNNYPSYT NPSASSSNHS NMGHPNASTG QTSAVQRMDP 60
FNQIPSELYG SASSTSIAAS TRQPSSQSQP SQQFRQMPAD LGASTSTMHS VAPIDIYDNY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAAATTCT TCCGACACAG CAGCCGAACG TGAAGCCGCA GCGGTCGTCT CAGCTGCAGA 60
CCGCCGAAGA CTTTCGGTTT GTACCGAGAG CTCCGCCCGC GCCAGCGGCA CCCACATCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0009408--P:response to heat
GO:0006970--P:response to osmotic stress

KEGG

cel:CELE_F53C11.7

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	44.55	3.00e-25	105.00
IUUC-Aml-002310	Ailuropoda melanoleuca	64.12	6.00e-121	425.00
IUUC-Atr-002970	Amborella trichopoda	52.74	2.00e-104	371.00
IUUC-Apl-003746	Anas platyrhynchos	64.12	6.00e-121	425.00
IUUC-Aca-005293	Anolis carolinensis	62.97	6.00e-136	475.00
IUUC-Aly-006500	Arabidopsis lyrata	51.71	1.00e-101	361.00
IUUC-Ath-006739	Arabidopsis thaliana	52.00	4.00e-102	363.00
IUUC-Ago-007732	Ashbya gossypii	32.06	4.00e-49	187.00
IUUC-Acl-008299	Aspergillus clavatus	33.66	2.00e-43	169.00
IUUC-Afl-008470	Aspergillus flavus	33.33	2.00e-43	169.00
IUUC-Afu-008896	Aspergillus fumigatus	33.50	5.00e-42	164.00
IUUC-Ani-009375	Aspergillus nidulans	33.75	2.00e-41	162.00
IUUC-Ang-009687	Aspergillus niger	33.81	2.00e-45	175.00
IUUC-Aor-010198	Aspergillus oryzae	32.93	5.00e-43	167.00
IUUC-Ate-010363	Aspergillus terreus	33.62	8.00e-39	153.00
IUUC-Ame-010643	Astyanax mexicanus	53.54	7.00e-110	389.00
IUUC-Bgr-012055	Blumeria graminis	32.94	8.00e-45	174.00
IUUC-Bta-013199	Bos taurus	62.97	4.00e-136	476.00
IUUC-Bci-013840	Botrytis cinerea	33.59	2.00e-44	172.00
IUUC-Bdi-014374	Brachypodium distachyon	44.20	8.00e-92	329.00
IUUC-Bol-015620	Brassica oleracea	47.28	1.00e-83	301.00
IUUC-Bra-017922	Brassica rapa	52.00	7.00e-102	362.00
IUUC-Cja-018736	Callithrix jacchus	62.97	4.00e-136	476.00
IUUC-Cfa-020446	Canis familiaris	62.97	4.00e-136	476.00
IUUC-Cpo-022424	Cavia porcellus	62.97	4.00e-136	476.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	52.23	5.00e-99	352.00
IUUC-Csa-024013	Chlorocebus sabaeus	64.50	3.00e-124	438.00
IUUC-Cho-024507	Choloepus hoffmanni	64.77	1.00e-122	430.00
IUUC-Cin-025620	Ciona intestinalis	64.24	9.00e-140	488.00
IUUC-Csv-026111	Ciona savignyi	64.53	2.00e-140	490.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	32.84	1.00e-44	172.00
IUUC-Cne-026871	Cryptococcus neoformans	37.16	7.00e-42	163.00
IUUC-Cme-027345	Cyanidioschyzon merolae	33.52	1.00e-58	219.00
IUUC-Dre-027940	Danio rerio	63.56	7.00e-137	478.00
IUUC-Dno-029520	Dasypus novemcinctus	62.97	4.00e-136	476.00
IUUC-Dor-030262	Dipodomys ordii	65.62	4.00e-38	150.00
IUUC-Dse-031207	Dothistroma septosporum	29.73	3.00e-40	158.00
IUUC-Dme-031639	Drosophila melanogaster	63.37	4.00e-132	462.00
IUUC-Ete-032605	Echinops telfairi	52.65	4.00e-99	353.00
IUUC-Eca-033668	Equus caballus	59.48	4.00e-124	436.00
IUUC-Fca-035942	Felis catus	62.97	4.00e-136	476.00
IUUC-Fal-037544	Ficedula albicollis	62.97	4.00e-136	476.00
IUUC-Fox-037852	Fusarium oxysporum	33.00	5.00e-50	191.00
IUUC-Fso-038173	Fusarium solani	33.66	2.00e-47	181.00
IUUC-Gmo-038850	Gadus morhua	63.27	7.00e-137	478.00
IUUC-Ggr-040072	Gaeumannomyces graminis	33.01	2.00e-46	178.00
IUUC-Gga-040439	Gallus gallus	62.97	4.00e-136	476.00
IUUC-Gac-041776	Gasterosteus aculeatus	63.56	4.00e-137	479.00
IUUC-Gma-043558	Glycine max	52.15	4.00e-102	363.00
IUUC-Ggo-044490	Gorilla gorilla	62.97	4.00e-136	476.00
IUUC-Hsa-046015	Homo sapiens	62.97	4.00e-136	476.00
IUUC-Hvu-047667	Hordeum vulgare	44.12	6.00e-91	326.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	62.97	4.00e-136	476.00
IUUC-Kpa-049347	Komagataella pastoris	31.83	3.00e-46	177.00
IUUC-Lch-049754	Latimeria chalumnae	63.27	6.00e-137	478.00
IUUC-Lpe-050741	Leersia perrieri	44.28	3.00e-91	327.00
IUUC-Loc-052351	Lepisosteus oculatus	62.61	5.00e-134	469.00
IUUC-Lma-053005	Leptosphaeria maculans	35.59	4.00e-43	168.00
IUUC-Laf-054077	Loxodonta africana	62.97	4.00e-136	476.00
IUUC-Mcc-055728	Macaca mulatta	62.97	4.00e-136	476.00
IUUC-Meu-056685	Macropus eugenii	57.27	6.00e-109	385.00
IUUC-Mor-057075	Magnaporthe oryzae	31.95	3.00e-44	171.00
IUUC-Mpo-057336	Magnaporthe poae	34.14	2.00e-47	181.00
IUUC-Mtr-057654	Medicago truncatula	49.05	3.00e-101	360.00
IUUC-Mla-058866	Melampsora laricipopulina	33.65	3.00e-51	194.00
IUUC-Mga-059566	Meleagris gallopavo	64.12	6.00e-121	425.00
IUUC-Mvi-060379	Microbotryum violaceum	40.59	1.00e-35	142.00
IUUC-Mmr-060831	Microcebus murinus	62.97	4.00e-136	476.00
IUUC-Mdo-062612	Monodelphis domestica	62.97	4.00e-136	476.00
IUUC-Mmu-063399	Mus musculus	62.97	4.00e-136	476.00
IUUC-Mac-065226	Musa acuminata	46.01	3.00e-84	303.00
IUUC-Mpu-065951	Mustela putorius furo	62.97	4.00e-136	476.00
IUUC-Mlu-067858	Myotis lucifugus	62.79	7.00e-135	471.00
IUUC-Nfi-068302	Neosartorya fischeri	32.78	8.00e-43	167.00
IUUC-Ncr-068642	Neurospora crassa	32.27	1.00e-45	176.00
IUUC-Nle-070059	Nomascus leucogenys	62.97	4.00e-136	476.00
IUUC-Opr-070572	Ochotona princeps	63.34	1.00e-137	481.00
IUUC-Ont-071420	Oreochromis niloticus	61.81	7.00e-132	462.00
IUUC-Ocu-074105	Oryctolagus cuniculus	62.97	4.00e-136	476.00
IUUC-Oba-075409	Oryza barthii	44.72	7.00e-91	326.00
IUUC-Obr-076284	Oryza brachyantha	44.69	2.00e-80	291.00
IUUC-Ogl-076984	Oryza glaberrima	44.47	7.00e-91	326.00
IUUC-Ogu-078283	Oryza glumaepatula	44.47	6.00e-91	326.00
IUUC-Oin-080194	Oryza indica	43.33	1.00e-69	254.00
IUUC-Olo-080234	Oryza longistaminata	43.03	5.00e-69	253.00
IUUC-Ome-081174	Oryza meridionalis	44.47	7.00e-91	326.00
IUUC-Oni-082033	Oryza nivara	44.47	7.00e-91	326.00
IUUC-Opu-084034	Oryza punctata	44.44	7.00e-92	329.00
IUUC-Oru-084908	Oryza rufipogon	45.33	5.00e-85	307.00
IUUC-Osa-085678	Oryza sativa	44.47	7.00e-91	326.00
IUUC-Ola-086324	Oryzias latipes	63.56	5.00e-137	479.00
IUUC-Olu-087620	Ostreococcus lucimarinus	54.76	2.00e-107	380.00
IUUC-Oga-088446	Otolemur garnettii	62.97	4.00e-136	476.00
IUUC-Oar-090168	Ovis aries	62.97	4.00e-136	476.00
IUUC-Ptr-090691	Pan troglodytes	63.16	3.00e-136	476.00
IUUC-Pan-092772	Papio anubis	62.97	4.00e-136	476.00
IUUC-Psi-093304	Pelodiscus sinensis	65.07	2.00e-109	386.00
IUUC-Pma-094292	Petromyzon marinus	65.00	3.00e-122	429.00
IUUC-Pno-094967	Phaeosphaeria nodorum	33.86	6.00e-43	167.00
IUUC-Ppa-095734	Physcomitrella patens	53.89	3.00e-105	373.00
IUUC-Pfo-097157	Poecilia formosa	63.56	5.00e-137	479.00
IUUC-Pab-097898	Pongo abelii	64.50	4.00e-124	437.00
IUUC-Pop-099943	Populus trichocarpa	52.29	2.00e-102	363.00
IUUC-Pca-100404	Procavia capensis	63.34	1.00e-137	481.00
IUUC-Ppe-102015	Prunus persica	49.07	3.00e-101	360.00
IUUC-Pva-102938	Pteropus vampyrus	58.48	8.00e-75	272.00
IUUC-Pgr-103490	Puccinia graminis	33.56	2.00e-54	204.00
IUUC-Ptt-103946	Puccinia triticina	37.02	7.00e-55	206.00
IUUC-Pte-104094	Pyrenophora teres	36.44	3.00e-43	168.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	36.16	4.00e-43	168.00
IUUC-Rno-104961	Rattus norvegicus	62.97	4.00e-136	476.00
IUUC-Sce-106252	Saccharomyces cerevisiae	36.36	6.00e-51	194.00
IUUC-Sha-107196	Sarcophilus harrisii	50.58	3.00e-101	360.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	36.36	5.00e-52	197.00
IUUC-Spo-108014	Schizosaccharomyces pombe	33.65	1.00e-55	209.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	33.59	6.00e-44	171.00
IUUC-Smo-109596	Selaginella moellendorffii	54.47	9.00e-103	365.00
IUUC-Sit-110625	Setaria italica	44.13	5.00e-65	240.00
IUUC-Sly-111410	Solanum lycopersicum	52.87	1.00e-105	375.00
IUUC-Stu-112854	Solanum tuberosum	53.16	5.00e-106	376.00
IUUC-Sar-113705	Sorex araneus	57.48	1.00e-112	397.00
IUUC-Sbi-114474	Sorghum bicolor	44.28	1.00e-89	321.00
IUUC-Sre-114968	Sporisorium reilianum	37.85	1.00e-43	169.00
IUUC-Ssc-116028	Sus scrofa	62.97	4.00e-136	476.00
IUUC-Tgu-117189	Taeniopygia guttata	62.97	4.00e-136	476.00
IUUC-Tru-117581	Takifugu rubripes	63.56	6.00e-137	478.00
IUUC-Tsy-119425	Tarsius syrichta	50.00	1.00e-84	305.00
IUUC-Tni-120649	Tetraodon nigroviridis	63.27	4.00e-135	472.00
IUUC-Tca-121561	Theobroma cacao	52.29	4.00e-103	366.00
IUUC-Tre-121987	Trichoderma reesei	32.80	1.00e-43	169.00
IUUC-Tvi-122586	Trichoderma virens	33.33	6.00e-45	173.00
IUUC-Tae-123331	Triticum aestivum	44.33	1.00e-90	325.00
IUUC-Tur-126531	Triticum urartu	44.78	2.00e-92	331.00
IUUC-Tme-126973	Tuber melanosporum	34.10	5.00e-41	161.00
IUUC-Tbe-127919	Tupaia belangeri	63.34	1.00e-137	481.00
IUUC-Ttr-129135	Tursiops truncatus	66.11	4.00e-72	263.00
IUUC-Uma-129362	Ustilago maydis	43.05	2.00e-43	169.00
IUUC-Vda-130025	Verticillium dahliae	33.77	3.00e-44	171.00
IUUC-Vpa-130486	Vicugna pacos	39.26	2.00e-58	217.00
IUUC-Vvi-131265	Vitis vinifera	50.55	9.00e-102	362.00
IUUC-Xtr-132175	Xenopus tropicalis	63.27	4.00e-137	479.00
IUUC-Xma-134129	Xiphophorus maculatus	63.56	5.00e-137	479.00
IUUC-Yli-134419	Yarrowia lipolytica	38.46	9.00e-59	219.00
IUUC-Zma-135092	Zea mays	44.20	5.00e-91	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence