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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Spo-108174
UUCD1 version UUC-ScP-00299
Ensembl Protein ID SPAC6G9.08.1:pep
UniProt Accession Q92353; UBP6_SCHPO
Genbank Protein ID CAB03610.2
Protein Name Ubiquitin carboxyl-terminal hydrolase 6; Deubiquitinating enzyme 6; Ubiquitin thiollesterase 6; Ubiquitin-specific-processing protease 6
Genbank Nucleotide ID CU329670
Gene Name ubp6; SPAC6G9.08
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPAC6G9.08 SPAC6G9.08.1 SPAC6G9.08.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexHINTMentha
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
DUB/USP USP 15533439
ULD/UDP/UBQ/UBQ_PIM UBQ_PIM 14536023; 15117949
Classification
Family E-value Score Start End
DUB/USP 4.30e-58 195.2 102 464
ULD/UDP/UBQ/UBQ_PIM 6.50e-16 56.1 5 73
Active Site
Position(s) Description Evidence
110 Nucleophile ECO:0000255|PROSITE-ProRule:PRU10092,
ECO:0000255|PROSITE-ProRule:PRU10093}
415 Proton acceptor ECO:0000255|PROSITE-ProRule:PRU10092,
ECO:0000255|PROSITE-ProRule:PRU10093}
Domain Profile

   DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.......gy 87
    Gl NlgNtCYmNS++Q+L +ipel +++ + +n ++g l+ ++++l++++ +++ v+p ++l++l++e ++f gy
   Q: 102 GLINLGNTCYMNSTVQMLRAIPELSDAVSQ-----FN------SSGGLVAEYRTLLNSM--QSNAPVTPMRFLQSLRMEYPQFAemsretgGY 181
    9*****************************.....44......5689************..78889*****************99******** PP
   S: 88 eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvp 177
    +qqDa+E+++fll+ l+++l +++++++++ g+l s++kc e + + ++++fl+l+++++
   Q: 182 AQQDAEECWSFLLSVLQRSL------------------------------SSEWVQKNMAGKLLSTMKCDENEVQEqpsISHDTFLSLPCHIS 244
    ********************..............................789****************887644333499************ PP
   S: 178 gkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts... 267
    ++++ q +Le t++ + +++ +++ +k ++++lP++L++++ Rf ++ + +++ ki +kv+fp eLd +fct
   Q: 245 MHTSY---MTQGILEGLTQKIS------KHSDVLNRDAMYSKISRISRLPNYLTVNFVRFYWKASIGKKAKILRKVKFPFELDAVEFCTPels 328
    ***88...56666666555433......467889999999**************************************************777 PP
   S: 268 ..............................peekqke..................................kkkYeLiavvvHsG.slssGHY 295
    p + + Y+L++v++H G s+ssGHY
   Q: 329 qklipvrdklreiekndeeheraakrikiqP-----SedekeaeaecrltqvatcqslvdpeladdeganpTGLYDLVGVLSHAGaSASSGHY 416
    7777777777777766666666666666551.....04445556666777777777777777777777777********************** PP
   S: 296 vayvknekgk..WllfdDskVtevkeeevleetg....staYvlfYkr 337
    a+++n++++ W++f+D kV+ v+ e++++ g ++aY+l+Yk
   Q: 417 QAWIRNSNNRaeWFRFNDAKVSIVPAEKIETLDGggeaDSAYILLYKA 464
    ******888888*******************888************96 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 3    ltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvk 72
    + +++ +gk++ le+++++t + lK+++ + ++vppe+qk+I +G +LkDd L ++gik + +++++++
   Q: 5 IAIRW-QGKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATLLMMGT 73
    67777.9************************************************************987 PP
   

Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description



     Ubiquitin-protein hydrolase is involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. This enzyme is a thiol protease that recognizes and hydrolyzes a peptide bond at the C-terminal glycine of ubiquitin.
Ubiquitin-protein hydrolase is involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. This enzyme is a thiol protease that recognizes and hydrolyzes a peptide bond at the C-terminal glycine of ubiquitin.
Protein Sequence
(Fasta)
MMIPIAIRWQ GKKYDLEIEP NETGSTLKHQ LYSLTQVPPE RQKVIVKGGQ LKDDVLLGSV 60
GIKPNATLLM MGTAGELPTA MPIPAVESVE QEESEDDGYP SGLINLGNTC YMNSTVQMLR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Spo-108174|DUB,USP;ULD,UBQ_PIM|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGAGTATATA GCTCGTTACT GTATGGCCTT CACCAAGTAC CAGCAACATA TATAATAAGT 60
ATAATTTGCA AAGAATTACA AAAAAAATTA TATTGGGCTT AAACAAGTAT TTCTTTCATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Spo-108174|DUB,USP;ULD,UBQ_PIM|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0539--Nucleus
KW-0645--Protease
KW-0647--Proteasome
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0000502--C:proteasome complex
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016579--P:protein deubiquitination

KEGG spo:SPAC6G9.08
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000893 Aegilops tauschii 29.94 1.00e-28 119.00
IUUC-Aml-002053 Ailuropoda melanoleuca 36.90 8.00e-82 295.00
IUUC-Atr-002725 Amborella trichopoda 38.45 2.00e-76 277.00
IUUC-Apl-004031 Anas platyrhynchos 36.40 2.00e-82 297.00
IUUC-Aca-004361 Anolis carolinensis 36.44 2.00e-84 304.00
IUUC-Aly-006176 Arabidopsis lyrata 37.20 8.00e-86 308.00
IUUC-Ath-007658 Arabidopsis thaliana 38.41 3.00e-87 313.00
IUUC-Ago-007796 Ashbya gossypii 37.50 5.00e-87 312.00
IUUC-Acl-008258 Aspergillus clavatus 39.72 1.00e-105 375.00
IUUC-Afl-008732 Aspergillus flavus 41.95 5.00e-114 402.00
IUUC-Afu-008755 Aspergillus fumigatus 39.33 2.00e-106 377.00
IUUC-Ani-009148 Aspergillus nidulans 41.95 4.00e-115 406.00
IUUC-Ang-009878 Aspergillus niger 41.62 1.00e-114 404.00
IUUC-Aor-010239 Aspergillus oryzae 41.95 4.00e-114 402.00
IUUC-Ate-010243 Aspergillus terreus 42.01 2.00e-113 400.00
IUUC-Ame-011327 Astyanax mexicanus 27.68 5.00e-30 123.00
IUUC-Bgr-012231 Blumeria graminis 39.93 1.00e-108 384.00
IUUC-Bta-012553 Bos taurus 35.93 7.00e-82 295.00
IUUC-Bci-013606 Botrytis cinerea 44.09 8.00e-112 395.00
IUUC-Bdi-014567 Brachypodium distachyon 39.59 2.00e-86 310.00
IUUC-Bol-016127 Brassica oleracea 38.51 9.00e-88 315.00
IUUC-Bra-017501 Brassica rapa 38.51 3.00e-88 317.00
IUUC-Cel-018140 Caenorhabditis elegans 34.50 1.00e-74 271.00
IUUC-Cja-019516 Callithrix jacchus 36.88 3.00e-82 296.00
IUUC-Cfa-020808 Canis familiaris 36.63 3.00e-82 297.00
IUUC-Cpo-021688 Cavia porcellus 36.81 2.00e-82 297.00
IUUC-Cre-022663 Chlamydomonas reinhardtii 31.66 1.00e-55 208.00
IUUC-Csa-023429 Chlorocebus sabaeus 36.53 9.00e-82 295.00
IUUC-Cho-024347 Choloepus hoffmanni 36.13 4.00e-82 296.00
IUUC-Cin-025198 Ciona intestinalis 36.36 7.00e-74 269.00
IUUC-Csv-026007 Ciona savignyi 35.13 4.00e-74 270.00
IUUC-Cgl-026757 Colletotrichum gloeosporioides 40.87 2.00e-104 370.00
IUUC-Cne-026963 Cryptococcus neoformans 38.16 2.00e-75 274.00
IUUC-Cme-027240 Cyanidioschyzon merolae 31.92 4.00e-63 233.00
IUUC-Dre-027647 Danio rerio 38.10 2.00e-85 307.00
IUUC-Dno-029967 Dasypus novemcinctus 36.73 8.00e-82 295.00
IUUC-Dor-030886 Dipodomys ordii 33.48 2.00e-57 214.00
IUUC-Dse-031466 Dothistroma septosporum 34.93 2.00e-86 311.00
IUUC-Dme-032079 Drosophila melanogaster 37.89 3.00e-86 310.00
IUUC-Ete-032351 Echinops telfairi 37.03 3.00e-79 286.00
IUUC-Eca-033461 Equus caballus 37.72 1.00e-87 315.00
IUUC-Eeu-035220 Erinaceus europaeus 35.64 5.00e-22 97.10
IUUC-Fca-036210 Felis catus 37.00 2.00e-82 297.00
IUUC-Fal-037528 Ficedula albicollis 36.60 9.00e-81 291.00
IUUC-Fox-037805 Fusarium oxysporum 45.23 8.00e-88 315.00
IUUC-Fso-038177 Fusarium solani 41.77 2.00e-110 391.00
IUUC-Gmo-038953 Gadus morhua 35.67 7.00e-75 272.00
IUUC-Ggr-039972 Gaeumannomyces graminis 38.41 7.00e-104 369.00
IUUC-Gga-040462 Gallus gallus 36.01 2.00e-81 294.00
IUUC-Gac-041312 Gasterosteus aculeatus 37.98 2.00e-83 301.00
IUUC-Gma-043255 Glycine max 39.88 3.00e-88 316.00
IUUC-Ggo-045458 Gorilla gorilla 31.51 2.00e-58 218.00
IUUC-Hsa-045706 Homo sapiens 36.53 6.00e-82 296.00
IUUC-Hvu-047821 Hordeum vulgare 42.66 1.00e-40 157.00
IUUC-Itr-048654 Ictidomys tridecemlineatus 37.05 2.00e-86 310.00
IUUC-Lch-050464 Latimeria chalumnae 38.43 3.00e-85 307.00
IUUC-Lpe-051419 Leersia perrieri 38.45 2.00e-81 293.00
IUUC-Loc-052732 Lepisosteus oculatus 37.80 2.00e-86 310.00
IUUC-Lma-053177 Leptosphaeria maculans 39.08 3.00e-104 370.00
IUUC-Laf-053822 Loxodonta africana 36.20 4.00e-82 296.00
IUUC-Mcc-055893 Macaca mulatta 36.53 6.00e-82 296.00
IUUC-Meu-056307 Macropus eugenii 35.33 2.00e-74 271.00
IUUC-Mor-057171 Magnaporthe oryzae 41.70 8.00e-112 395.00
IUUC-Mpo-057415 Magnaporthe poae 40.36 8.00e-110 389.00
IUUC-Mtr-057901 Medicago truncatula 37.25 1.00e-81 295.00
IUUC-Mla-058897 Melampsora laricipopulina 38.24 6.00e-90 322.00
IUUC-Mga-060016 Meleagris gallopavo 36.44 2.00e-81 294.00
IUUC-Mvi-060562 Microbotryum violaceum 42.66 2.00e-66 244.00
IUUC-Mmr-060624 Microcebus murinus 37.42 2.00e-87 313.00
IUUC-Mdo-061809 Monodelphis domestica 36.45 2.00e-81 294.00
IUUC-Mmu-063869 Mus musculus 36.31 5.00e-82 296.00
IUUC-Mac-064876 Musa acuminata 36.23 1.00e-76 278.00
IUUC-Mpu-066480 Mustela putorius furo 36.63 4.00e-82 296.00
IUUC-Mlu-067866 Myotis lucifugus 36.60 5.00e-83 299.00
IUUC-Nfi-068393 Neosartorya fischeri 39.68 2.00e-106 377.00
IUUC-Ncr-068815 Neurospora crassa 41.68 4.00e-114 403.00
IUUC-Nle-070121 Nomascus leucogenys 41.12 1.00e-37 147.00
IUUC-Opr-070712 Ochotona princeps 40.95 8.00e-47 179.00
IUUC-Ont-071544 Oreochromis niloticus 36.60 4.00e-73 266.00
IUUC-Oan-073635 Ornithorhynchus anatinus 35.51 1.00e-65 241.00
IUUC-Ocu-074926 Oryctolagus cuniculus 36.53 7.00e-82 295.00
IUUC-Oba-075633 Oryza barthii 38.04 2.00e-79 287.00
IUUC-Obr-076423 Oryza brachyantha 39.14 5.00e-86 309.00
IUUC-Ogl-077913 Oryza glaberrima 38.73 9.00e-85 305.00
IUUC-Ogu-078435 Oryza glumaepatula 38.04 2.00e-79 287.00
IUUC-Oin-080072 Oryza indica 38.07 4.00e-79 286.00
IUUC-Olo-080535 Oryza longistaminata 36.01 2.00e-70 258.00
IUUC-Ome-081309 Oryza meridionalis 38.04 2.00e-79 287.00
IUUC-Oni-083113 Oryza nivara 38.04 2.00e-79 287.00
IUUC-Opu-083168 Oryza punctata 37.22 2.00e-74 270.00
IUUC-Oru-084253 Oryza rufipogon 38.04 2.00e-79 287.00
IUUC-Osa-085554 Oryza sativa 38.73 7.00e-85 305.00
IUUC-Ola-086998 Oryzias latipes 37.55 1.00e-79 288.00
IUUC-Olu-087818 Ostreococcus lucimarinus 35.46 6.00e-67 246.00
IUUC-Oga-088571 Otolemur garnettii 36.61 2.00e-82 297.00
IUUC-Oar-089526 Ovis aries 35.71 1.00e-81 295.00
IUUC-Ptr-091433 Pan troglodytes 36.53 6.00e-82 296.00
IUUC-Pan-091966 Papio anubis 36.53 9.00e-82 295.00
IUUC-Psi-093458 Pelodiscus sinensis 38.20 7.00e-84 302.00
IUUC-Pma-094343 Petromyzon marinus 36.11 3.00e-40 156.00
IUUC-Pno-095109 Phaeosphaeria nodorum 39.93 4.00e-110 389.00
IUUC-Ppa-095756 Physcomitrella patens 38.88 3.00e-90 323.00
IUUC-Pfo-096514 Poecilia formosa 36.42 2.00e-74 270.00
IUUC-Pab-098477 Pongo abelii 34.67 8.00e-64 235.00
IUUC-Pop-099221 Populus trichocarpa 38.54 1.00e-81 295.00
IUUC-Pca-100791 Procavia capensis 31.24 3.00e-44 170.00
IUUC-Ppe-101812 Prunus persica 36.99 2.00e-79 287.00
IUUC-Pva-102462 Pteropus vampyrus 36.16 2.00e-66 244.00
IUUC-Pgr-103623 Puccinia graminis 43.03 4.00e-69 253.00
IUUC-Ptt-103767 Puccinia triticina 36.13 3.00e-82 296.00
IUUC-Pte-104109 Pyrenophora teres 40.04 6.00e-111 392.00
IUUC-Pyt-104766 Pyrenophora triticirepentis 39.33 3.00e-107 380.00
IUUC-Rno-105351 Rattus norvegicus 36.33 6.00e-81 292.00
IUUC-Sce-106168 Saccharomyces cerevisiae 39.31 4.00e-81 293.00
IUUC-Sha-107491 Sarcophilus harrisii 36.01 9.00e-82 295.00
IUUC-Sja-107769 Schizosaccharomyces japonicus 59.53 4.00e-167 578.00
IUUC-Ssl-108659 Sclerotinia sclerotiorum 41.76 8.00e-110 389.00
IUUC-Smo-108805 Selaginella moellendorffii 37.53 8.00e-83 298.00
IUUC-Sit-110361 Setaria italica 38.68 3.00e-87 313.00
IUUC-Sly-110965 Solanum lycopersicum 39.43 5.00e-85 306.00
IUUC-Sar-113355 Sorex araneus 35.85 4.00e-47 179.00
IUUC-Sbi-114778 Sorghum bicolor 38.89 2.00e-84 303.00
IUUC-Sre-115011 Sporisorium reilianum 42.37 2.00e-70 258.00
IUUC-Ssc-116273 Sus scrofa 36.78 2.00e-80 290.00
IUUC-Tgu-117063 Taeniopygia guttata 36.17 6.00e-81 292.00
IUUC-Tru-118381 Takifugu rubripes 37.13 3.00e-80 290.00
IUUC-Tsy-119076 Tarsius syrichta 36.32 3.00e-37 147.00
IUUC-Tni-119941 Tetraodon nigroviridis 37.38 3.00e-78 283.00
IUUC-Tca-121246 Theobroma cacao 38.06 1.00e-83 301.00
IUUC-Tre-121969 Trichoderma reesei 41.05 2.00e-105 374.00
IUUC-Tvi-122543 Trichoderma virens 41.07 8.00e-111 392.00
IUUC-Tae-125484 Triticum aestivum 38.11 3.00e-83 300.00
IUUC-Tur-126128 Triticum urartu 29.71 6.00e-29 120.00
IUUC-Tbe-128030 Tupaia belangeri 33.01 1.00e-63 235.00
IUUC-Ttr-128701 Tursiops truncatus 36.57 3.00e-64 237.00
IUUC-Uma-129657 Ustilago maydis 37.34 1.00e-87 315.00
IUUC-Vda-129723 Verticillium dahliae 40.50 1.00e-108 384.00
IUUC-Vpa-130284 Vicugna pacos 48.78 1.00e-18 85.90
IUUC-Vvi-131037 Vitis vinifera 38.85 9.00e-87 311.00
IUUC-Xtr-132235 Xenopus tropicalis 37.03 7.00e-85 305.00
IUUC-Xma-133840 Xiphophorus maculatus 36.78 6.00e-80 289.00
IUUC-Yli-134453 Yarrowia lipolytica 44.56 1.00e-106 377.00
IUUC-Zma-135791 Zea mays 34.65 2.00e-67 247.00
Created Date 25-Jun-2017

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