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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018229
Ensembl Protein ID T05H4.14
UniProt Accession O16519; GAD1_CAEEL
Genbank Protein ID CCD72040.1
Protein Name Gastrulation defective protein 1
Genbank Nucleotide ID FO081501
Gene Name gad-1; T05H4.14
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00001513 T05H4.14 T05H4.14
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNAmiRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPAFdbPTMPhospho.ELMPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.50e-27 93.0 222 258
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           gHt+ v+c++f   + + ++s+sdDg++++W+l++++
   Q: 222  GHTATVNCVEFnplNKNEFISCSDDGSLRLWNLDDHK 258
           8**********9954499***************9887 PP
   
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Required for initiation of gastrulation.
 Required for initiation of gastrulation.
Protein Sequence
(Fasta)
MDDNTAPKKN SEKKARVFDL QAMFAQTISN APRTEEPTHV PQSVSVSSKS ESGVSSSAVS 60
DDEDDFMPDL PPGFQMQQSE AGPSSSRAEG PEDSDDSDFD ETEAISIIKL IPAACEAKIS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018229|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCACCACAA TGGATGATAA TACGGCTCCA AAAAAGAATT CTGAAAAGAA GGCACGCGTC 60
TTTGACCTCC AAGCAATGTT CGCGCAAACG ATAAGCAATG CTCCCAGAAC TGAGGAACCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018229|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005623--C:cell
GO:0042074--P:cell migration involved in gastrulation
GO:0000132--P:establishment of mitotic spindle orientation
GO:0007346--P:regulation of mitotic cell cycle
KEGG cel:CELE_T05H4.14
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000150 Aegilops tauschii 34.58 6.00e-78 284.00
IUUC-Aml-002098 Ailuropoda melanoleuca 36.09 2.00e-55 208.00
IUUC-Atr-002886 Amborella trichopoda 33.99 1.00e-75 275.00
IUUC-Apl-004059 Anas platyrhynchos 39.67 4.00e-86 310.00
IUUC-Aca-004427 Anolis carolinensis 40.85 8.00e-96 343.00
IUUC-Aly-006122 Arabidopsis lyrata 35.18 3.00e-74 271.00
IUUC-Ath-006952 Arabidopsis thaliana 34.58 2.00e-74 271.00
IUUC-Acl-008150 Aspergillus clavatus 29.14 2.00e-38 152.00
IUUC-Afl-008722 Aspergillus flavus 27.81 1.00e-36 146.00
IUUC-Afu-009003 Aspergillus fumigatus 27.81 1.00e-37 149.00
IUUC-Ani-009306 Aspergillus nidulans 25.46 5.00e-38 150.00
IUUC-Ang-009780 Aspergillus niger 28.69 3.00e-33 135.00
IUUC-Aor-010109 Aspergillus oryzae 27.81 1.00e-36 146.00
IUUC-Ate-010484 Aspergillus terreus 28.27 1.00e-37 149.00
IUUC-Ame-011248 Astyanax mexicanus 38.85 3.00e-102 364.00
IUUC-Bgr-012093 Blumeria graminis 26.13 7.00e-41 160.00
IUUC-Bta-013581 Bos taurus 37.57 1.00e-92 332.00
IUUC-Bci-013900 Botrytis cinerea 24.72 7.00e-40 157.00
IUUC-Bdi-014951 Brachypodium distachyon 35.36 6.00e-80 290.00
IUUC-Bol-016482 Brassica oleracea 33.99 6.00e-72 263.00
IUUC-Bra-016976 Brassica rapa 34.34 2.00e-71 262.00
IUUC-Cja-019101 Callithrix jacchus 37.60 7.00e-92 330.00
IUUC-Cfa-020638 Canis familiaris 37.77 3.00e-93 335.00
IUUC-Cpo-022323 Cavia porcellus 37.77 2.00e-93 335.00
IUUC-Csa-023743 Chlorocebus sabaeus 37.18 4.00e-91 327.00
IUUC-Cho-024356 Choloepus hoffmanni 30.96 7.00e-35 140.00
IUUC-Cin-025151 Ciona intestinalis 36.33 2.00e-85 308.00
IUUC-Csv-025820 Ciona savignyi 35.23 1.00e-83 303.00
IUUC-Cgl-026404 Colletotrichum gloeosporioides 25.82 9.00e-38 150.00
IUUC-Cne-026790 Cryptococcus neoformans 34.02 5.00e-61 227.00
IUUC-Dno-029526 Dasypus novemcinctus 37.18 4.00e-92 331.00
IUUC-Dse-031347 Dothistroma septosporum 25.61 2.00e-43 169.00
IUUC-Dme-032052 Drosophila melanogaster 36.94 1.00e-94 339.00
IUUC-Ete-032851 Echinops telfairi 36.71 6.00e-48 183.00
IUUC-Fca-035931 Felis catus 37.97 2.00e-93 335.00
IUUC-Fal-037139 Ficedula albicollis 40.59 1.00e-95 342.00
IUUC-Fox-037696 Fusarium oxysporum 25.19 5.00e-40 157.00
IUUC-Fso-038349 Fusarium solani 24.57 3.00e-39 155.00
IUUC-Gmo-039027 Gadus morhua 40.33 2.00e-100 358.00
IUUC-Ggr-039982 Gaeumannomyces graminis 27.09 1.00e-33 136.00
IUUC-Gga-041080 Gallus gallus 39.04 6.00e-96 343.00
IUUC-Gac-041296 Gasterosteus aculeatus 40.61 9.00e-102 362.00
IUUC-Gma-044316 Glycine max 35.05 1.00e-79 289.00
IUUC-Ggo-045123 Gorilla gorilla 36.40 4.00e-82 297.00
IUUC-Hsa-046541 Homo sapiens 37.18 3.00e-91 327.00
IUUC-Itr-048403 Ictidomys tridecemlineatus 37.57 8.00e-93 333.00
IUUC-Lch-050163 Latimeria chalumnae 40.04 2.00e-98 351.00
IUUC-Lpe-051614 Leersia perrieri 34.97 4.00e-78 284.00
IUUC-Loc-052721 Lepisosteus oculatus 38.41 2.00e-101 361.00
IUUC-Lma-053034 Leptosphaeria maculans 26.21 5.00e-40 157.00
IUUC-Laf-053704 Loxodonta africana 38.17 1.00e-93 336.00
IUUC-Mcc-055688 Macaca mulatta 37.18 2.00e-91 328.00
IUUC-Mor-057275 Magnaporthe oryzae 26.34 5.00e-39 154.00
IUUC-Mpo-057450 Magnaporthe poae 26.78 3.00e-38 152.00
IUUC-Mtr-057970 Medicago truncatula 36.24 4.00e-83 301.00
IUUC-Mla-059172 Melampsora laricipopulina 30.61 3.00e-62 231.00
IUUC-Mvi-060266 Microbotryum violaceum 30.17 1.00e-55 209.00
IUUC-Mmr-061611 Microcebus murinus 38.00 2.00e-92 332.00
IUUC-Mdo-062609 Monodelphis domestica 38.09 5.00e-96 343.00
IUUC-Mmu-064354 Mus musculus 37.18 4.00e-91 327.00
IUUC-Mac-065632 Musa acuminata 34.59 3.00e-77 281.00
IUUC-Mpu-066749 Mustela putorius furo 37.77 8.00e-93 333.00
IUUC-Mlu-067579 Myotis lucifugus 37.77 4.00e-93 334.00
IUUC-Nfi-068556 Neosartorya fischeri 28.34 4.00e-38 151.00
IUUC-Ncr-068877 Neurospora crassa 25.66 6.00e-30 124.00
IUUC-Nle-069176 Nomascus leucogenys 37.60 1.00e-91 329.00
IUUC-Opr-070293 Ochotona princeps 37.57 2.00e-90 325.00
IUUC-Ont-071297 Oreochromis niloticus 39.02 5.00e-102 363.00
IUUC-Oan-073450 Ornithorhynchus anatinus 41.27 2.00e-20 89.70
IUUC-Ocu-074449 Oryctolagus cuniculus 37.57 3.00e-92 331.00
IUUC-Oba-075858 Oryza barthii 34.96 5.00e-78 284.00
IUUC-Obr-076052 Oryza brachyantha 34.46 6.00e-79 287.00
IUUC-Ogl-077756 Oryza glaberrima 35.25 1.00e-80 292.00
IUUC-Ogu-078993 Oryza glumaepatula 34.96 6.00e-78 284.00
IUUC-Oin-079429 Oryza indica 35.05 4.00e-80 291.00
IUUC-Olo-080823 Oryza longistaminata 35.44 4.00e-79 287.00
IUUC-Ome-081852 Oryza meridionalis 35.25 9.00e-81 293.00
IUUC-Oni-082474 Oryza nivara 34.76 2.00e-77 282.00
IUUC-Opu-083450 Oryza punctata 33.20 2.00e-72 265.00
IUUC-Oru-084642 Oryza rufipogon 35.15 3.00e-78 285.00
IUUC-Osa-086011 Oryza sativa 35.25 3.00e-80 291.00
IUUC-Ola-086398 Oryzias latipes 39.39 2.00e-99 355.00
IUUC-Olu-087769 Ostreococcus lucimarinus 33.07 6.00e-63 233.00
IUUC-Oga-088727 Otolemur garnettii 38.10 5.00e-93 333.00
IUUC-Oar-090392 Ovis aries 37.57 9.00e-93 333.00
IUUC-Ptr-090921 Pan troglodytes 37.18 4.00e-91 327.00
IUUC-Pan-092085 Papio anubis 37.25 2.00e-87 315.00
IUUC-Psi-093709 Pelodiscus sinensis 38.41 6.00e-97 347.00
IUUC-Pno-095050 Phaeosphaeria nodorum 24.56 1.00e-38 153.00
IUUC-Ppa-095333 Physcomitrella patens 33.06 3.00e-73 268.00
IUUC-Pfo-097401 Poecilia formosa 39.59 1.00e-97 349.00
IUUC-Pab-097766 Pongo abelii 37.38 9.00e-92 330.00
IUUC-Pop-099011 Populus trichocarpa 35.35 9.00e-78 283.00
IUUC-Pca-100351 Procavia capensis 33.20 8.00e-34 137.00
IUUC-Ppe-101384 Prunus persica 35.45 2.00e-80 291.00
IUUC-Pva-102654 Pteropus vampyrus 37.77 6.00e-93 333.00
IUUC-Pgr-103415 Puccinia graminis 29.76 2.00e-62 232.00
IUUC-Ptt-103925 Puccinia triticina 29.90 6.00e-62 230.00
IUUC-Pte-104394 Pyrenophora teres 25.05 7.00e-38 150.00
IUUC-Pyt-104674 Pyrenophora triticirepentis 24.86 2.00e-38 152.00
IUUC-Rno-105663 Rattus norvegicus 37.57 1.00e-91 329.00
IUUC-Sha-107567 Sarcophilus harrisii 37.50 4.00e-106 377.00
IUUC-Sja-107939 Schizosaccharomyces japonicus 26.11 4.00e-34 138.00
IUUC-Spo-108037 Schizosaccharomyces pombe 23.30 7.00e-27 114.00
IUUC-Ssl-108526 Sclerotinia sclerotiorum 25.05 3.00e-38 151.00
IUUC-Smo-108751 Selaginella moellendorffii 33.53 1.00e-75 276.00
IUUC-Sit-110170 Setaria italica 35.63 2.00e-80 291.00
IUUC-Sly-111518 Solanum lycopersicum 34.91 1.00e-72 266.00
IUUC-Stu-112755 Solanum tuberosum 37.08 7.00e-84 303.00
IUUC-Sar-113590 Sorex araneus 34.24 6.00e-62 230.00
IUUC-Sbi-114091 Sorghum bicolor 35.38 7.00e-81 293.00
IUUC-Sre-115111 Sporisorium reilianum 24.93 5.00e-28 117.00
IUUC-Ssc-115453 Sus scrofa 37.47 8.00e-88 316.00
IUUC-Tgu-117285 Taeniopygia guttata 40.39 9.00e-95 339.00
IUUC-Tru-118474 Takifugu rubripes 39.92 9.00e-100 356.00
IUUC-Tsy-119547 Tarsius syrichta 37.19 1.00e-75 276.00
IUUC-Tni-120818 Tetraodon nigroviridis 40.61 1.00e-100 359.00
IUUC-Tca-121621 Theobroma cacao 34.85 4.00e-79 287.00
IUUC-Tre-122146 Trichoderma reesei 24.91 9.00e-41 160.00
IUUC-Tvi-122353 Trichoderma virens 25.81 9.00e-41 160.00
IUUC-Tae-123385 Triticum aestivum 37.85 4.00e-63 234.00
IUUC-Tur-125971 Triticum urartu 34.75 8.00e-77 279.00
IUUC-Tme-127185 Tuber melanosporum 24.85 2.00e-35 142.00
IUUC-Tbe-127554 Tupaia belangeri 29.97 1.00e-27 116.00
IUUC-Ttr-128995 Tursiops truncatus 37.57 2.00e-92 332.00
IUUC-Uma-129618 Ustilago maydis 23.06 5.00e-24 104.00
IUUC-Vda-129832 Verticillium dahliae 24.39 2.00e-31 129.00
IUUC-Vpa-130592 Vicugna pacos 36.03 7.00e-42 164.00
IUUC-Vvi-131574 Vitis vinifera 34.38 4.00e-78 285.00
IUUC-Xtr-132234 Xenopus tropicalis 40.20 9.00e-97 346.00
IUUC-Xma-133780 Xiphophorus maculatus 39.92 3.00e-97 348.00
IUUC-Yli-134658 Yarrowia lipolytica 29.66 6.00e-09 54.30
IUUC-Zma-135697 Zea mays 34.97 1.00e-79 289.00
Created Date 25-Jun-2017

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