iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.50e-07	29.3	214	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.......kdgplvlp.CgHvfhadClqkw.pglknssskefrCPlCr 46
           C iC++ +       k+   +lp C+H+f+++C+  w + ++ + + +  CP Cr
   Q: 214  CGICFDTImekagreKR-FGILPnCNHIFCLECIRTWrQAKQFENKITRACPECR 267
           9*****99665554333.445667*************7666666777889****8 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSAVTSSDTA ISGMALGRSQ TICRYYVRGI CRFGELCRFS HDLSRGRPEC EEQVATDVLP 60
KPSTSSSSTI GSRSASISSQ QRNWANAPVF VPSQKRYTAH EQSEFETTVD PEAVMEAQAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGTCTTCA ATGGCTTTGG TCACACTGCG GAAAAAAATT GTGAATGTGA TCCAAGGTGC 60
ATAAAACGAC AAAGTAAGAA ACTGTGAGTG CTGTGGACAT TAAACCAGCT TCGATTTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000209--P:protein polyubiquitination

KEGG

dme:Dmel_CG7184

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000297	Aegilops tauschii	38.04	2.00e-30	126.00
IUUC-Aml-001937	Ailuropoda melanoleuca	37.43	5.00e-55	207.00
IUUC-Atr-003024	Amborella trichopoda	31.55	1.00e-38	152.00
IUUC-Apl-004110	Anas platyrhynchos	37.61	5.00e-54	204.00
IUUC-Aca-005385	Anolis carolinensis	36.71	9.00e-58	216.00
IUUC-Aly-006124	Arabidopsis lyrata	40.43	8.00e-34	136.00
IUUC-Ath-006918	Arabidopsis thaliana	39.89	5.00e-33	134.00
IUUC-Ame-011246	Astyanax mexicanus	37.32	4.00e-59	221.00
IUUC-Bta-012318	Bos taurus	37.54	7.00e-56	210.00
IUUC-Bdi-015008	Brachypodium distachyon	31.76	3.00e-35	141.00
IUUC-Bol-015689	Brassica oleracea	37.50	4.00e-33	134.00
IUUC-Bra-017030	Brassica rapa	42.01	3.00e-36	144.00
IUUC-Cel-018642	Caenorhabditis elegans	33.33	2.00e-45	176.00
IUUC-Cja-019550	Callithrix jacchus	40.83	1.00e-52	199.00
IUUC-Cfa-020166	Canis familiaris	36.46	5.00e-55	207.00
IUUC-Cpo-021887	Cavia porcellus	37.95	2.00e-56	211.00
IUUC-Cre-022707	Chlamydomonas reinhardtii	34.42	2.00e-29	122.00
IUUC-Csa-023930	Chlorocebus sabaeus	37.40	3.00e-56	211.00
IUUC-Cho-024307	Choloepus hoffmanni	37.43	3.00e-55	208.00
IUUC-Cin-025619	Ciona intestinalis	37.85	1.00e-61	229.00
IUUC-Csv-026322	Ciona savignyi	34.78	4.00e-55	207.00
IUUC-Dre-027762	Danio rerio	37.36	7.00e-59	220.00
IUUC-Dno-029666	Dasypus novemcinctus	35.90	2.00e-53	202.00
IUUC-Dor-030133	Dipodomys ordii	52.10	1.00e-42	166.00
IUUC-Ete-032356	Echinops telfairi	51.85	3.00e-28	117.00
IUUC-Eca-033340	Equus caballus	37.40	1.00e-56	213.00
IUUC-Eeu-035167	Erinaceus europaeus	50.73	5.00e-52	197.00
IUUC-Fca-035536	Felis catus	36.84	2.00e-55	208.00
IUUC-Fal-036881	Ficedula albicollis	37.33	1.00e-56	213.00
IUUC-Gmo-039495	Gadus morhua	49.51	2.00e-57	215.00
IUUC-Ggr-039835	Gaeumannomyces graminis	32.81	8.00e-03	34.70
IUUC-Gga-041148	Gallus gallus	36.68	2.00e-56	212.00
IUUC-Gac-041790	Gasterosteus aculeatus	38.15	2.00e-64	238.00
IUUC-Ggo-045245	Gorilla gorilla	36.87	1.00e-54	206.00
IUUC-Hsa-046589	Homo sapiens	36.87	2.00e-54	205.00
IUUC-Hvu-047044	Hordeum vulgare	38.89	1.00e-33	136.00
IUUC-Itr-048468	Ictidomys tridecemlineatus	53.29	1.00e-43	168.00
IUUC-Lch-049777	Latimeria chalumnae	40.61	1.00e-60	226.00
IUUC-Lpe-050699	Leersia perrieri	26.21	6.00e-08	50.40
IUUC-Loc-052281	Lepisosteus oculatus	37.23	4.00e-61	228.00
IUUC-Laf-054551	Loxodonta africana	39.15	2.00e-55	209.00
IUUC-Mcc-055160	Macaca mulatta	36.87	2.00e-54	206.00
IUUC-Meu-056809	Macropus eugenii	36.39	6.00e-56	210.00
IUUC-Mtr-057908	Medicago truncatula	36.99	4.00e-07	47.40
IUUC-Mla-059005	Melampsora laricipopulina	37.40	1.00e-19	90.50
IUUC-Mga-059767	Meleagris gallopavo	35.20	3.00e-54	205.00
IUUC-Mmr-061574	Microcebus murinus	37.11	1.00e-56	213.00
IUUC-Mdo-061974	Monodelphis domestica	37.17	5.00e-58	217.00
IUUC-Mmu-063887	Mus musculus	35.97	8.00e-54	203.00
IUUC-Mac-064993	Musa acuminata	30.26	4.00e-37	147.00
IUUC-Mpu-066756	Mustela putorius furo	36.90	2.00e-53	202.00
IUUC-Mlu-067691	Myotis lucifugus	38.38	2.00e-57	215.00
IUUC-Nle-069845	Nomascus leucogenys	37.15	3.00e-54	205.00
IUUC-Opr-070262	Ochotona princeps	38.18	3.00e-54	204.00
IUUC-Ont-071561	Oreochromis niloticus	37.17	1.00e-65	243.00
IUUC-Oan-073517	Ornithorhynchus anatinus	59.09	9.00e-11	59.70
IUUC-Ocu-074869	Oryctolagus cuniculus	35.62	2.00e-41	162.00
IUUC-Obr-076508	Oryza brachyantha	26.21	5.00e-07	47.00
IUUC-Ogl-077895	Oryza glaberrima	27.18	1.00e-08	52.40
IUUC-Ogu-078576	Oryza glumaepatula	27.18	8.00e-09	52.80
IUUC-Ome-081355	Oryza meridionalis	27.72	9.00e-09	52.80
IUUC-Oni-082120	Oryza nivara	27.18	1.00e-08	52.40
IUUC-Oru-084679	Oryza rufipogon	27.18	9.00e-09	52.80
IUUC-Osa-085728	Oryza sativa	27.18	2.00e-08	52.00
IUUC-Ola-086506	Oryzias latipes	36.05	1.00e-61	229.00
IUUC-Olu-087870	Ostreococcus lucimarinus	35.71	3.00e-25	106.00
IUUC-Oga-088871	Otolemur garnettii	37.95	2.00e-56	212.00
IUUC-Oar-090436	Ovis aries	38.15	6.00e-56	210.00
IUUC-Ptr-091519	Pan troglodytes	37.15	1.00e-54	206.00
IUUC-Pan-092582	Papio anubis	36.22	1.00e-54	206.00
IUUC-Psi-093168	Pelodiscus sinensis	37.30	1.00e-58	219.00
IUUC-Pfo-096075	Poecilia formosa	36.58	5.00e-64	237.00
IUUC-Pab-098764	Pongo abelii	37.12	1.00e-55	209.00
IUUC-Pop-099909	Populus trichocarpa	31.29	3.00e-37	148.00
IUUC-Pca-100903	Procavia capensis	38.33	3.00e-60	224.00
IUUC-Ppe-101248	Prunus persica	40.12	1.00e-35	142.00
IUUC-Pva-103124	Pteropus vampyrus	36.33	5.00e-42	164.00
IUUC-Rno-104976	Rattus norvegicus	36.51	4.00e-54	204.00
IUUC-Sha-107572	Sarcophilus harrisii	36.36	2.00e-57	215.00
IUUC-Smo-109483	Selaginella moellendorffii	38.92	3.00e-36	144.00
IUUC-Sit-110077	Setaria italica	30.94	3.00e-36	144.00
IUUC-Sar-113068	Sorex araneus	36.54	8.00e-54	203.00
IUUC-Sbi-114884	Sorghum bicolor	30.58	9.00e-37	146.00
IUUC-Ssc-115272	Sus scrofa	36.31	2.00e-54	206.00
IUUC-Tgu-116537	Taeniopygia guttata	37.60	3.00e-57	214.00
IUUC-Tru-118205	Takifugu rubripes	35.44	7.00e-65	240.00
IUUC-Tsy-118929	Tarsius syrichta	50.73	9.00e-52	196.00
IUUC-Tni-120744	Tetraodon nigroviridis	37.43	5.00e-64	237.00
IUUC-Tca-121675	Theobroma cacao	35.09	1.00e-35	142.00
IUUC-Tae-123511	Triticum aestivum	30.99	2.00e-06	45.10
IUUC-Tur-126806	Triticum urartu	37.80	8.00e-31	127.00
IUUC-Tme-127048	Tuber melanosporum	28.97	2.00e-14	72.80
IUUC-Tbe-128131	Tupaia belangeri	34.86	3.00e-42	164.00
IUUC-Ttr-129099	Tursiops truncatus	36.34	2.00e-56	212.00
IUUC-Vpa-130663	Vicugna pacos	39.62	8.00e-40	156.00
IUUC-Xtr-132036	Xenopus tropicalis	54.24	1.00e-50	192.00
IUUC-Xma-134162	Xiphophorus maculatus	36.84	1.00e-65	242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence