iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000020634.12	ENSMUST00000141360.1	ENSMUSP00000116832.1
ENSMUSG00000020634.12	ENSMUST00000020962.11	ENSMUSP00000020962.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RepTar	RAID2
Protein-protein Interaction
IID	HINT	Mentha
Post-translational Modifications (PTMs)
PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	5.30e-14	53.6	173	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 4    eqatlqiRlpdGkrlvrkFpssttleqiyqfve.yllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsll 78
           + +++qi+l++G+r v++F+ s+++++i +f+e y+ +++s pF L +++P   + +e+   tl+ea+L +  +++
   Q: 173  PITRIQIWLANGERTVQRFNVSHRVSHIKDFIEkYQGSQRSPPFALATALPFLRFLDETL--TLEEADLKNAVIIQ 246
           579*********************************************************..*********99886 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MKEVDNLDSI KEEWACETGP PDSQPLNDNQ QKDCEYFVDS LFEEAGKAGA KCLSPTEQKK 60
QVDVNIKLWK NGFTVNDDFR SYSDGASQQF LNSIKKGELP SELWGIFDKE EVDVKVEDKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCCCGTCA GCCAGGCGCG CCGAGCCATC CCCGGCGCGC TCCCGTCAGC CAGGCGCGCT 60
CCTCCGAGCC GCGCGGAGCC GTCCCCGGAG CGCTCCCGTC AGCCAGGCGC GCTCCTCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012989--SEP_domain
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005801--C:cis-Golgi network
GO:0005829--C:cytosol
GO:0005783--C:endoplasmic reticulum
GO:0005634--C:nucleus
GO:0033130--F:acetylcholine receptor binding
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010468--P:regulation of gene expression
GO:0042176--P:regulation of protein catabolic process
GO:0031396--P:regulation of protein ubiquitination

KEGG

mmu:217379

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002393	Ailuropoda melanoleuca	85.37	6.00e-105	373.00
IUUC-Apl-004089	Anas platyrhynchos	64.09	4.00e-80	291.00
IUUC-Aca-005094	Anolis carolinensis	57.92	2.00e-73	268.00
IUUC-Ame-011164	Astyanax mexicanus	38.63	3.00e-35	142.00
IUUC-Bta-012790	Bos taurus	86.82	3.00e-113	400.00
IUUC-Cja-019967	Callithrix jacchus	86.43	4.00e-110	390.00
IUUC-Cfa-020180	Canis familiaris	85.27	2.00e-112	398.00
IUUC-Cpo-021719	Cavia porcellus	81.96	4.00e-107	380.00
IUUC-Csa-023840	Chlorocebus sabaeus	85.27	3.00e-113	400.00
IUUC-Cho-024683	Choloepus hoffmanni	84.50	6.00e-111	393.00
IUUC-Dre-028501	Danio rerio	47.30	1.00e-49	189.00
IUUC-Dno-029129	Dasypus novemcinctus	82.95	2.00e-119	421.00
IUUC-Ete-033198	Echinops telfairi	77.16	1.00e-67	248.00
IUUC-Eca-033335	Equus caballus	87.21	8.00e-113	399.00
IUUC-Fca-036141	Felis catus	86.05	6.00e-110	389.00
IUUC-Fal-037574	Ficedula albicollis	64.12	1.00e-77	282.00
IUUC-Gmo-039656	Gadus morhua	45.18	1.00e-36	146.00
IUUC-Gga-040681	Gallus gallus	62.55	1.00e-79	289.00
IUUC-Gac-042408	Gasterosteus aculeatus	48.73	1.00e-44	172.00
IUUC-Ggo-045649	Gorilla gorilla	84.88	2.00e-110	391.00
IUUC-Hsa-045755	Homo sapiens	84.88	2.00e-110	391.00
IUUC-Lch-050482	Latimeria chalumnae	50.59	4.00e-61	228.00
IUUC-Loc-052184	Lepisosteus oculatus	42.21	1.00e-44	172.00
IUUC-Laf-053715	Loxodonta africana	86.05	3.00e-110	390.00
IUUC-Mga-060206	Meleagris gallopavo	61.39	4.00e-78	284.00
IUUC-Mmr-061401	Microcebus murinus	88.76	2.00e-113	401.00
IUUC-Mdo-061891	Monodelphis domestica	60.89	6.00e-81	293.00
IUUC-Mpu-066583	Mustela putorius furo	83.14	3.00e-105	374.00
IUUC-Mlu-067179	Myotis lucifugus	82.17	3.00e-101	360.00
IUUC-Nle-069125	Nomascus leucogenys	84.88	1.00e-110	392.00
IUUC-Opr-070527	Ochotona princeps	66.28	5.00e-83	300.00
IUUC-Ont-072648	Oreochromis niloticus	43.80	8.00e-46	176.00
IUUC-Oan-072825	Ornithorhynchus anatinus	68.20	2.00e-75	275.00
IUUC-Ocu-073897	Oryctolagus cuniculus	85.27	6.00e-111	393.00
IUUC-Ola-086332	Oryzias latipes	34.24	1.00e-31	129.00
IUUC-Oga-088217	Otolemur garnettii	84.11	1.00e-107	382.00
IUUC-Oar-090372	Ovis aries	85.27	5.00e-111	393.00
IUUC-Ptr-091011	Pan troglodytes	84.50	7.00e-106	376.00
IUUC-Pan-092177	Papio anubis	85.66	9.00e-114	402.00
IUUC-Psi-093793	Pelodiscus sinensis	61.54	4.00e-80	290.00
IUUC-Pfo-096059	Poecilia formosa	45.95	1.00e-43	169.00
IUUC-Pab-098103	Pongo abelii	81.15	2.00e-102	364.00
IUUC-Pca-101031	Procavia capensis	65.16	2.00e-77	281.00
IUUC-Pva-102671	Pteropus vampyrus	72.83	9.00e-82	296.00
IUUC-Rno-105700	Rattus norvegicus	95.74	5.00e-121	426.00
IUUC-Sha-106530	Sarcophilus harrisii	43.68	2.00e-42	165.00
IUUC-Sar-113329	Sorex araneus	61.63	5.00e-57	214.00
IUUC-Ssc-115898	Sus scrofa	84.84	4.00e-113	400.00
IUUC-Tgu-116984	Taeniopygia guttata	62.16	2.00e-79	288.00
IUUC-Tru-118339	Takifugu rubripes	48.43	5.00e-54	203.00
IUUC-Tbe-127537	Tupaia belangeri	70.78	3.00e-74	271.00
IUUC-Ttr-128822	Tursiops truncatus	69.38	4.00e-88	317.00
IUUC-Vpa-130266	Vicugna pacos	87.31	9.00e-81	293.00
IUUC-Xtr-132381	Xenopus tropicalis	47.86	3.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence