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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-104883
UUCD1 version UUC-RaN-00792
Ensembl Protein ID ENSRNOP00000028834.3
UniProt Accession Q3T1H9; Q3T1H9_RAT
Genbank Protein ID AAI01913.1; EDL80203.1
Protein Name Similar to Rnf37-pending protein; U-box domain containing 5; U-box domain-containing 5
Genbank Nucleotide ID AABR07053740; CH473949
Gene Name Ubox5; RGD1305440; rCG_26722
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000021230.4 ENSRNOT00000028834.4 ENSRNOP00000028834.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 1.90e-18 66.6 258 337
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedl.vPnltlrrliqawceenss 74
    +vpeefl+pI+le+M +P+ lpsG ++d+s++ek+ s ++P+t+ +t++++ P+ +l++ i++++ ++s+
   Q: 258 DVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKCNLSEAAwgrvpSDPFTGLAFTPQSQpLPHPSLKARIDRFLLQHSI 337
    69*********************************877777999***********999999****************987 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MVINLCLPQF RPRIHCNKVS ADGYEVENLI SEDLIKRSHG FRTEYFIRPP IYVTVSFPFN 60
VEICRVNIDL TAGGCQNVTG LELYTSALSS RAPQDAQDCW TTGLSETSVP DKEAFTLVGK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-104883|E3,U-box|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGTTGTGGAG CGGTTGATGC GGGAGTCTGT ATATTGACTT ACCTGGTGCG GCCAGGGACT 60
GGAGTTAGGG CGCTACCCTC GTGGGTTTCA GGTGAGTGGA CGGCCGGAAA GGAGGTGGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-104883|E3,U-box|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008979--Galactose-bd-like
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51698--U_BOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF04564--U-box
PF14634--zf-RING_5

SMART

SM00504--Ubox

Gene Ontology

GO:0005925--C:focal adhesion
GO:0016604--C:nuclear body
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0008270--F:zinc ion binding
GO:0000209--P:protein polyubiquitination

KEGG rno:296161
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001702 Ailuropoda melanoleuca 81.15 0.00e+00 864.00
IUUC-Apl-003809 Anas platyrhynchos 58.14 1.00e-175 609.00
IUUC-Ame-011326 Astyanax mexicanus 33.10 1.00e-66 247.00
IUUC-Bta-012836 Bos taurus 71.72 0.00e+00 738.00
IUUC-Cja-018735 Callithrix jacchus 78.56 0.00e+00 840.00
IUUC-Cfa-020914 Canis familiaris 80.04 0.00e+00 848.00
IUUC-Cpo-022397 Cavia porcellus 75.42 0.00e+00 821.00
IUUC-Csa-023033 Chlorocebus sabaeus 79.24 0.00e+00 749.00
IUUC-Cho-025050 Choloepus hoffmanni 73.42 5.00e-127 447.00
IUUC-Cin-025271 Ciona intestinalis 24.72 1.00e-20 92.80
IUUC-Csv-025960 Ciona savignyi 28.08 2.00e-24 105.00
IUUC-Dre-028494 Danio rerio 33.45 1.00e-62 233.00
IUUC-Dno-029134 Dasypus novemcinctus 65.58 2.00e-151 528.00
IUUC-Dme-032212 Drosophila melanogaster 41.67 8.00e-27 115.00
IUUC-Eca-033535 Equus caballus 79.30 0.00e+00 838.00
IUUC-Fca-036298 Felis catus 80.33 0.00e+00 859.00
IUUC-Fal-037385 Ficedula albicollis 59.01 1.00e-169 589.00
IUUC-Gmo-039572 Gadus morhua 63.01 6.00e-22 99.00
IUUC-Gga-040207 Gallus gallus 57.93 5.00e-178 617.00
IUUC-Gac-042339 Gasterosteus aculeatus 40.36 4.00e-54 205.00
IUUC-Ggo-044710 Gorilla gorilla 79.48 0.00e+00 863.00
IUUC-Hsa-045766 Homo sapiens 79.11 0.00e+00 860.00
IUUC-Itr-048280 Ictidomys tridecemlineatus 79.85 0.00e+00 868.00
IUUC-Lch-050587 Latimeria chalumnae 45.96 2.00e-126 445.00
IUUC-Laf-053430 Loxodonta africana 72.83 0.00e+00 745.00
IUUC-Mcc-055661 Macaca mulatta 79.30 0.00e+00 862.00
IUUC-Meu-055959 Macropus eugenii 56.69 4.00e-162 564.00
IUUC-Mga-059505 Meleagris gallopavo 58.41 4.00e-178 617.00
IUUC-Mmr-061218 Microcebus murinus 79.67 0.00e+00 827.00
IUUC-Mdo-062113 Monodelphis domestica 63.41 0.00e+00 662.00
IUUC-Mmu-063349 Mus musculus 92.39 0.00e+00 970.00
IUUC-Mpu-066189 Mustela putorius furo 74.68 0.00e+00 746.00
IUUC-Mlu-067083 Myotis lucifugus 78.56 0.00e+00 856.00
IUUC-Nle-069481 Nomascus leucogenys 77.04 3.00e-112 399.00
IUUC-Opr-070674 Ochotona princeps 74.34 0.00e+00 782.00
IUUC-Ont-071995 Oreochromis niloticus 37.66 4.00e-79 288.00
IUUC-Oan-073003 Ornithorhynchus anatinus 60.56 6.00e-166 577.00
IUUC-Ocu-073834 Oryctolagus cuniculus 79.30 0.00e+00 827.00
IUUC-Ola-086469 Oryzias latipes 35.89 4.00e-72 265.00
IUUC-Oga-088316 Otolemur garnettii 77.54 0.00e+00 718.00
IUUC-Oar-089563 Ovis aries 77.57 0.00e+00 841.00
IUUC-Ptr-091293 Pan troglodytes 78.93 0.00e+00 858.00
IUUC-Pan-092705 Papio anubis 78.86 0.00e+00 859.00
IUUC-Psi-093111 Pelodiscus sinensis 61.00 0.00e+00 645.00
IUUC-Pfo-096603 Poecilia formosa 28.80 2.00e-32 134.00
IUUC-Pab-098636 Pongo abelii 76.94 0.00e+00 753.00
IUUC-Pca-100109 Procavia capensis 76.25 1.00e-128 452.00
IUUC-Pva-103028 Pteropus vampyrus 80.78 0.00e+00 835.00
IUUC-Sha-107133 Sarcophilus harrisii 55.21 6.00e-170 590.00
IUUC-Ssc-116252 Sus scrofa 73.43 0.00e+00 757.00
IUUC-Tgu-117163 Taeniopygia guttata 59.19 3.00e-173 601.00
IUUC-Tru-118541 Takifugu rubripes 36.09 3.00e-73 269.00
IUUC-Tsy-119281 Tarsius syrichta 71.94 3.00e-156 544.00
IUUC-Tni-120789 Tetraodon nigroviridis 36.96 2.00e-71 263.00
IUUC-Ttr-128555 Tursiops truncatus 79.67 0.00e+00 840.00
IUUC-Xtr-132303 Xenopus tropicalis 51.83 1.00e-151 529.00
Created Date 25-Jun-2017

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