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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Hsa-045667
Ensembl Protein ID ENSP00000389709.2
UniProt Accession Q495C1; C9J8N0; Q495C0; Q86W82; Q8IY99; Q8N8U7; RN212_HUMAN
Genbank Protein ID BAC04714.1; AAH36250.2; AAH50356.2; AAI01259.1; AAI01260.1; AAI01261.1; AAI01262.1
Protein Name Probable E3 SUMO-protein ligase RNF212; RING finger protein 212
Genbank Nucleotide ID AK096160; AC019103; BC050356; BC101258; BC101259; BC101260; BC101261
Gene Name RNF212
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSG00000178222.12 ENST00000506730.5 ENSP00000425843.1
ENSG00000178222.12 ENST00000382968.9 ENSP00000372428.5
ENSG00000178222.12 ENST00000433731.6 ENSP00000389709.2
ENSG00000178222.12 ENST00000511620.5 ENSP00000426115.1
ENSG00000178222.12 ENST00000510715.5 ENSP00000423560.1
ENSG00000178222.12 ENST00000333673.5 ENSP00000327481.5
Annotation
Cancer Mutation
TCGAICGCCOSMICCGAP
IntOGen
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressTCGAICGC
COSMICTHPAHPM
DNA & RNA Element
UTRdbAREsitecircBaseCircNet
microRNATRANSFACTargetScanRepTar
SomamiRmiRcodeRAID2
Protein-protein Interaction
Mentha
Disease-associated Variation
ClinVarGWASdbOMIM
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
BioGRIDmUbiSiDa
DNA Methylation
TCGAICGCCOSMIC
Protein Expression/Proteomics
THPAGPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 76.17 2.00e-83 305.00 IUUC-Mmu-063236
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Homo sapiens
Functional Description
(View)

Functional Description



     SUMO E3 ligase that acts as a regulator of crossing-over during meiosis: required to couple chromosome synapsis to the formation of crossover-specific recombination complexes. Localizes to recombination sites and stabilizes meiosis-specific recombination factors, such as MutS-gamma complex proteins (MSH4 and MSH5) and TEX11. May mediate sumoylation of target proteins MSH4 and/or MSH5, leading to enhance their binding to recombination sites. Acts as a limiting factor for crossover designation and/or reinforcement and plays an antagonist role with CCNB1IP1/HEI10 in the regulation of meiotic recombination (By similarity).
SUMO E3 ligase that acts as a regulator of crossing-over during meiosis: required to couple chromosome synapsis to the formation of crossover-specific recombination complexes. Localizes to recombination sites and stabilizes meiosis-specific recombination factors, such as MutS-gamma complex proteins (MSH4 and MSH5) and TEX11. May mediate sumoylation of target proteins MSH4 and/or MSH5, leading to enhance their binding to recombination sites. Acts as a limiting factor for crossover designation and/or reinforcement and plays an antagonist role with CCNB1IP1/HEI10 in the regulation of meiotic recombination (By similarity).
Protein Sequence
(Fasta)
MANWVFCNRC FQPPHRTSCF SLTNCGHVYC DACLGKGKKN ECLICKAPCR TVLLSKHTDA 60
DIQAFFMSID SLCKKYSRET SQILEFQEKH RKRLLAFYRE KISRLEESLR KSVLQIEQLQ 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Hsa-045667|E3,RING|Homo sapiens
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Nucleotide Sequence
(Fasta)
AGAGCTGCCC GCCTTCGGGC CCTGCGCGGG GAGGCTGGTC CCAACCTTGC GTGGGCTTCG 60
CGTGGGCCCG GCCTCGCCGC TGCGGTCGCC CGCCTGGCAT GGCCAACTGG GTGTTCTGTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Hsa-045667|E3,RING|Homo sapiens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0158--Chromosome
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-0469--Meiosis
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0621--Polymorphism
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF14634--zf-RING_5

Gene Ontology

GO:0000795--C:synaptonemal complex
GO:0016874--F:ligase activity
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0051026--P:chiasma assembly
GO:0006311--P:meiotic gene conversion
GO:0016925--P:protein sumoylation
GO:0007131--P:reciprocal meiotic recombination
GO:0007129--P:synapsis

KEGG hsa:285498
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001870 Ailuropoda melanoleuca 78.76 3.00e-88 317.00
IUUC-Apl-003243 Anas platyrhynchos 52.94 3.00e-54 204.00
IUUC-Cja-019749 Callithrix jacchus 75.84 9.00e-122 429.00
IUUC-Cfa-021065 Canis familiaris 74.49 8.00e-82 296.00
IUUC-Cpo-021724 Cavia porcellus 78.05 8.00e-37 144.00
IUUC-Csa-023944 Chlorocebus sabaeus 88.70 8.00e-145 506.00
IUUC-Dre-028619 Danio rerio 42.99 3.00e-22 98.60
IUUC-Fal-036889 Ficedula albicollis 47.55 1.00e-46 179.00
IUUC-Gga-041126 Gallus gallus 54.90 2.00e-56 212.00
IUUC-Ggo-045115 Gorilla gorilla 97.98 2.00e-173 601.00
IUUC-Lch-049607 Latimeria chalumnae 40.82 7.00e-47 181.00
IUUC-Loc-052360 Lepisosteus oculatus 43.70 2.00e-31 127.00
IUUC-Mcc-055392 Macaca mulatta 95.83 7.00e-107 380.00
IUUC-Mga-060189 Meleagris gallopavo 52.69 2.00e-42 164.00
IUUC-Mdo-062424 Monodelphis domestica 66.67 4.00e-65 241.00
IUUC-Mmu-063236 Mus musculus 76.17 2.00e-84 305.00
IUUC-Mpu-066050 Mustela putorius furo 78.57 3.00e-87 315.00
IUUC-Nle-069489 Nomascus leucogenys 92.25 5.00e-133 466.00
IUUC-Oan-073698 Ornithorhynchus anatinus 55.44 4.00e-53 200.00
IUUC-Ocu-073927 Oryctolagus cuniculus 77.71 1.00e-68 251.00
IUUC-Ola-087241 Oryzias latipes 32.77 2.00e-20 91.30
IUUC-Ptr-091122 Pan troglodytes 98.30 1.00e-169 588.00
IUUC-Pan-092892 Papio anubis 94.79 8.00e-106 376.00
IUUC-Pab-097611 Pongo abelii 97.93 1.00e-109 389.00
IUUC-Rno-105151 Rattus norvegicus 75.65 1.00e-85 309.00
IUUC-Sha-107525 Sarcophilus harrisii 63.73 9.00e-67 246.00
IUUC-Tgu-116643 Taeniopygia guttata 50.99 8.00e-53 199.00
IUUC-Tbe-127755 Tupaia belangeri 43.30 3.00e-38 151.00
Created Date 25-Jun-2017

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