• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105536
Ensembl Protein ID ENSRNOP00000056303.3
UniProt Accession Q6MGC9; Q6MGC9_RAT
Genbank Protein ID CAE83917.1
Protein Name PHD finger protein 1
Genbank Nucleotide ID AC128962
Gene Name Phf1; AA926063; B3galt4; Cdk2ap1-ps1; Col11a2; Daxx; Hsd17b8; Kifc1; LOC224733l-1; LOC224733l-2; Rps
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000000480.7 ENSRNOT00000092247.1 ENSRNOP00000075915.1
ENSRNOG00000000480.7 ENSRNOT00000059548.3 ENSRNOP00000056303.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFAC
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 7.30e-10 39.3 89 140
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek.wiCpkCr 52
            C vC++++      lv CekCr+++H++C+ + +  + +++   w C++C 
   Q: 89   LCCVCRSETVVPGnRLVSCEKCRHAYHQDCHVPRAPAPGEGEGSsWVCRQCV 140
           588***999876459*******************55444444447******7 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAQLPRLSRL GAPSLWDPAS PAPTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105536|E3,PHD|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGGCTAGCT GCCAAGAAGG TTATTTCCTG CTGCCCTCAG AGCAAGCCTC CTATCCGAAA 60
AGGGGGCTAC AGGGATTTCC TCGTCCTCCC CGACCGGCCG CGCCTCCAAT AGCGCAGCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105536|E3,PHD|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR025894--Mtf2_C_dom
IPR031202--PHF1
IPR002999--Tudor
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF14061--Mtf2_C
PF00628--PHD
SMART

SM00249--PHD
SM00333--TUDOR
Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031060--P:regulation of histone methylation
KEGG rno:294287
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001720 Ailuropoda melanoleuca 93.47 0.00e+00 919.00
IUUC-Ame-011369 Astyanax mexicanus 47.45 7.00e-128 450.00
IUUC-Bta-012536 Bos taurus 92.42 0.00e+00 884.00
IUUC-Cja-019049 Callithrix jacchus 92.95 0.00e+00 895.00
IUUC-Cfa-021211 Canis familiaris 92.95 0.00e+00 915.00
IUUC-Cpo-021980 Cavia porcellus 91.39 0.00e+00 905.00
IUUC-Csa-023154 Chlorocebus sabaeus 92.42 0.00e+00 919.00
IUUC-Dre-028597 Danio rerio 50.74 3.00e-138 484.00
IUUC-Dor-030431 Dipodomys ordii 91.90 0.00e+00 875.00
IUUC-Ete-032589 Echinops telfairi 87.78 0.00e+00 900.00
IUUC-Eca-034315 Equus caballus 93.30 0.00e+00 942.00
IUUC-Gmo-039382 Gadus morhua 65.00 5.00e-120 423.00
IUUC-Gac-041748 Gasterosteus aculeatus 65.83 2.00e-122 431.00
IUUC-Ggo-044966 Gorilla gorilla 93.12 0.00e+00 899.00
IUUC-Hsa-046188 Homo sapiens 93.12 0.00e+00 868.00
IUUC-Itr-048249 Ictidomys tridecemlineatus 94.65 0.00e+00 926.00
IUUC-Lch-050336 Latimeria chalumnae 53.50 4.00e-150 524.00
IUUC-Laf-053729 Loxodonta africana 88.99 0.00e+00 859.00
IUUC-Mcc-055486 Macaca mulatta 92.42 0.00e+00 919.00
IUUC-Meu-055933 Macropus eugenii 92.92 0.00e+00 671.00
IUUC-Mmr-061114 Microcebus murinus 92.25 0.00e+00 926.00
IUUC-Mdo-062033 Monodelphis domestica 90.74 0.00e+00 658.00
IUUC-Mmu-063482 Mus musculus 96.96 0.00e+00 989.00
IUUC-Mpu-065725 Mustela putorius furo 92.77 0.00e+00 929.00
IUUC-Mlu-067243 Myotis lucifugus 90.30 0.00e+00 903.00
IUUC-Nle-069759 Nomascus leucogenys 92.95 0.00e+00 897.00
IUUC-Ont-071655 Oreochromis niloticus 54.17 6.00e-126 444.00
IUUC-Ocu-073930 Oryctolagus cuniculus 93.12 0.00e+00 902.00
IUUC-Oga-088161 Otolemur garnettii 90.65 0.00e+00 902.00
IUUC-Oar-089582 Ovis aries 92.08 0.00e+00 879.00
IUUC-Ptr-090810 Pan troglodytes 92.95 0.00e+00 919.00
IUUC-Pan-091980 Papio anubis 92.42 0.00e+00 919.00
IUUC-Pfo-097260 Poecilia formosa 61.02 1.00e-123 436.00
IUUC-Pab-098556 Pongo abelii 92.77 0.00e+00 894.00
IUUC-Pca-100360 Procavia capensis 93.74 0.00e+00 806.00
IUUC-Pva-102900 Pteropus vampyrus 91.70 0.00e+00 891.00
IUUC-Sha-107357 Sarcophilus harrisii 81.09 0.00e+00 828.00
IUUC-Ssc-116070 Sus scrofa 91.36 0.00e+00 863.00
IUUC-Tsy-119247 Tarsius syrichta 98.10 0.00e+00 632.00
IUUC-Tbe-127780 Tupaia belangeri 86.77 0.00e+00 833.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved