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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007587
UUCD1 version UUC-ArT-01312
Ensembl Protein ID AT1G26830.1
UniProt Accession Q9ZVH4; Q0WL17; Q7Y1Y8; CUL3A_ARATH
Genbank Protein ID CAC85344.1; CAC87120.1; AAD14503.1; AAF87034.1; AEE30747.1; BAF02190.1
Protein Name Cullin-3A
Genbank Nucleotide ID AJ319540; AJ344252; AC005508; AC006535; CP002684; AK230392
Gene Name CUL3A; CUL3; At1g26830; T2P11.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G26830 AT1G26830.1 AT1G26830.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/Cullin Cullin_N_terminal 15618422; 16045478
Classification
Family E-value Score Start End
E3 adaptor/Cullin RING/Cullin 6.50e-228 759.3 32 630
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/Cullin

   S: 2    lreavkkilrqesvkkeyeelytavynlclskvgaklYkklkevleefikqvkkkveesedeqlLktynreWekfreqlkvlrkifayldrtyvkksk 99
    l++a+++i++q+++ ++eely+++yn++l+k+g+klY+ + ++++++k+ +k +e++++ ++L+ +n++W++++++l+++r+i++y+drty++ +
   Q: 32 LERAIHQIYNQDASGLSFEELYRNAYNMVLHKFGEKLYTGFIATMTSHLKEKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIES-T 128
    789********************************************************************************************9.* PP
   S: 100 kvsevrkLaldlwrkeived..ikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqefykaesaeflqenevde 195
    k+++v+ ++l+lwr+++v+ i++rll++ll+l+++eR ge++dr l+++v++++++L+ +++y+e+FE++fl+a++efyk es+ef++++++ +
   Q: 129 KKTHVHPMGLNLWRDNVVHFtkIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLG---ESVYQEDFEKPFLDASSEFYKVESQEFIESCDCGD 223
    ******************9888*************************************9...9********************************** PP
   S: 196 YlkkvearlneeeeraaryleestetkLlevvekeliakhlesll....aelvallrdkktedlsrmykLlsrvlngleellkeleshikeqgkaalt 289
    Ylkk e+rl+ee er+a+yl++++e+k+++vveke+ia+h+++l+ ++lv++l ++k+edl+rmy+L++rv+ngl ++++ ++sh++e+gk+++t
   Q: 224 YLKKSEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANHMQRLVhmenSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREMGKQLVT 321
    *********************************************99999************************************************ PP
   S: 290 aeekekdpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaakspEllAryiDqlLrksskglteeeleaqldkvllvfkyis 387
    ++ek+kdp+++V+rll+ ++k++k++++aF+nd++F++al+++fe+f+n n a+spE+++ ++D++Lrk++kg+t+ ++e +ldkv+++f+y++
   Q: 322 DPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFINLN-----ARSPEFISLFVDDKLRKGLKGITDVDVEVILDKVMMLFRYLQ 414
    ***************************************************.....****************************************** PP
   S: 388 ekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfqdlkvSedlnrqFkeekenteesesvelsvlvLsagaWptasetekv 485
    ekdvFekyYk+hLakRLlsgk++s++aE+s+i kLk+ecg++ftskLe+Mf+d+k+Sed++r F+ ++ e se+++l v+vL++g+Wpt+++ + +
   Q: 415 EKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFY--GSHPELSEGPTLIVQVLTTGSWPTQPAVP-C 509
    *****************************************************************..99*************************99.* PP
   S: 486 sLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkkg.kyelqVstfQmavLLafnnsekvsveelkkatelpeeeLrrtlqsLvssk.kq 581
    +LPae++ ++ekf+++Yl +h+gR+L+Wq+++g+a++ka + kg k+el+VstfQm+vL++fnns+++s++e+++ate+p+++L+r+lqsL+++k k+
   Q: 510 NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGqKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKgKN 607
    *******************************************999**************************************************** PP
   S: 582 vlkkepeskeieeedlfsvNqef 604
    v+kkep+sk+i eedlf+vN++f
   Q: 608 VIKKEPMSKDIGEEDLFVVNDKF 630
    *********************99 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Component of the cullin-RING ubiquitin ligases (CRL), or CUL3-RBX1-BTB protein E3 ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the CRL complex depends on the BTB domain-containing protein as the susbstrate recognition component. Involved in embryo pattern formation and endosperm development. Required for the normal division and organization of the root stem cells and columella root cap cells. Regulates primary root growth by an unknown pathway, but in an ethylene-dependent manner. Functions in distal root patterning, by an ethylene-independent mechanism. Functionally redundant with CUL3B.
Component of the cullin-RING ubiquitin ligases (CRL), or CUL3-RBX1-BTB protein E3 ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the CRL complex depends on the BTB domain-containing protein as the susbstrate recognition component. Involved in embryo pattern formation and endosperm development. Required for the normal division and organization of the root stem cells and columella root cap cells. Regulates primary root growth by an unknown pathway, but in an ethylene-dependent manner. Functions in distal root patterning, by an ethylene-independent mechanism. Functionally redundant with CUL3B.
Protein Sequence
(Fasta)
MSNQKKRNFQ IEAFKHRVVV DPKYADKTWQ ILERAIHQIY NQDASGLSFE ELYRNAYNMV 60
LHKFGEKLYT GFIATMTSHL KEKSKLIEAA QGGSFLEELN KKWNEHNKAL EMIRDILMYM 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007587|E3,Cullin|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTGGACTTC GATATTTCAC AATTCTTTGT AACCAATATA CCAAAGGACG AGAATGTGAC 60
AACCGCGACT TTAATTTAAT AAATACGTTA TAGTTTGGAA ACCACCAGCA GAGACGGAGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007587|E3,Cullin|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway

Interpro

IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0031625--F:ubiquitin protein ligase binding
GO:0009911--P:positive regulation of flower development
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0009639--P:response to red or far red light

KEGG ath:AT1G26830
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001031 Aegilops tauschii 78.37 0.00e+00 1037.00
IUUC-Aml-002278 Ailuropoda melanoleuca 52.33 0.00e+00 762.00
IUUC-Apl-004172 Anas platyrhynchos 52.61 0.00e+00 763.00
IUUC-Aca-004309 Anolis carolinensis 52.03 0.00e+00 765.00
IUUC-Aly-005566 Arabidopsis lyrata 99.04 0.00e+00 1510.00
IUUC-Ago-007795 Ashbya gossypii 26.30 7.00e-54 204.00
IUUC-Acl-008317 Aspergillus clavatus 37.16 3.00e-146 512.00
IUUC-Afl-008727 Aspergillus flavus 37.61 3.00e-145 508.00
IUUC-Afu-008879 Aspergillus fumigatus 38.85 2.00e-136 478.00
IUUC-Ani-009393 Aspergillus nidulans 35.90 2.00e-137 483.00
IUUC-Ang-009626 Aspergillus niger 37.78 1.00e-144 506.00
IUUC-Aor-010207 Aspergillus oryzae 37.61 1.00e-145 509.00
IUUC-Ate-010305 Aspergillus terreus 37.75 1.00e-140 493.00
IUUC-Ame-011805 Astyanax mexicanus 51.77 0.00e+00 759.00
IUUC-Bgr-012098 Blumeria graminis 33.21 3.00e-109 389.00
IUUC-Bta-013445 Bos taurus 52.03 0.00e+00 765.00
IUUC-Bci-013612 Botrytis cinerea 33.70 1.00e-124 440.00
IUUC-Bdi-014269 Brachypodium distachyon 79.01 0.00e+00 1197.00
IUUC-Bol-015480 Brassica oleracea 95.90 0.00e+00 1466.00
IUUC-Bra-017151 Brassica rapa 96.17 0.00e+00 1471.00
IUUC-Cel-018641 Caenorhabditis elegans 41.52 9.00e-168 583.00
IUUC-Cja-019175 Callithrix jacchus 52.03 0.00e+00 764.00
IUUC-Cfa-020905 Canis familiaris 52.54 0.00e+00 763.00
IUUC-Cpo-021293 Cavia porcellus 51.85 0.00e+00 762.00
IUUC-Cre-022776 Chlamydomonas reinhardtii 61.90 0.00e+00 934.00
IUUC-Csa-023800 Chlorocebus sabaeus 52.16 0.00e+00 766.00
IUUC-Cho-024839 Choloepus hoffmanni 52.54 0.00e+00 667.00
IUUC-Cin-025201 Ciona intestinalis 48.29 0.00e+00 631.00
IUUC-Csv-026107 Ciona savignyi 50.40 0.00e+00 710.00
IUUC-Cgl-026630 Colletotrichum gloeosporioides 33.99 8.00e-123 434.00
IUUC-Cme-027254 Cyanidioschyzon merolae 31.02 6.00e-98 351.00
IUUC-Dre-028488 Danio rerio 52.17 0.00e+00 765.00
IUUC-Dno-029784 Dasypus novemcinctus 52.03 0.00e+00 764.00
IUUC-Dor-030682 Dipodomys ordii 48.12 0.00e+00 654.00
IUUC-Dse-031326 Dothistroma septosporum 34.41 4.00e-122 431.00
IUUC-Dme-032112 Drosophila melanogaster 49.60 0.00e+00 704.00
IUUC-Ete-032347 Echinops telfairi 46.12 4.00e-159 554.00
IUUC-Eca-033560 Equus caballus 52.61 0.00e+00 763.00
IUUC-Eeu-034502 Erinaceus europaeus 52.24 0.00e+00 676.00
IUUC-Fca-035544 Felis catus 52.61 0.00e+00 763.00
IUUC-Fal-036751 Ficedula albicollis 52.46 0.00e+00 763.00
IUUC-Fox-037857 Fusarium oxysporum 34.36 3.00e-127 448.00
IUUC-Fso-038163 Fusarium solani 34.12 2.00e-128 452.00
IUUC-Gmo-038830 Gadus morhua 52.65 0.00e+00 764.00
IUUC-Ggr-039999 Gaeumannomyces graminis 32.74 9.00e-121 427.00
IUUC-Gga-040329 Gallus gallus 52.03 0.00e+00 764.00
IUUC-Gac-041915 Gasterosteus aculeatus 52.30 0.00e+00 760.00
IUUC-Gma-043182 Glycine max 82.75 0.00e+00 1273.00
IUUC-Ggo-044903 Gorilla gorilla 52.67 0.00e+00 759.00
IUUC-Hsa-046000 Homo sapiens 52.16 0.00e+00 766.00
IUUC-Hvu-047831 Hordeum vulgare 78.59 0.00e+00 1106.00
IUUC-Lch-050458 Latimeria chalumnae 52.47 0.00e+00 762.00
IUUC-Lpe-051396 Leersia perrieri 79.01 0.00e+00 1226.00
IUUC-Loc-052186 Lepisosteus oculatus 52.03 0.00e+00 764.00
IUUC-Lma-053030 Leptosphaeria maculans 36.60 1.00e-133 469.00
IUUC-Laf-053684 Loxodonta africana 52.61 0.00e+00 763.00
IUUC-Mcc-055770 Macaca mulatta 52.16 0.00e+00 766.00
IUUC-Meu-056852 Macropus eugenii 47.26 1.00e-112 400.00
IUUC-Mor-057273 Magnaporthe oryzae 34.11 8.00e-127 447.00
IUUC-Mpo-057403 Magnaporthe poae 33.53 2.00e-124 439.00
IUUC-Mtr-058317 Medicago truncatula 81.56 0.00e+00 1274.00
IUUC-Mga-060076 Meleagris gallopavo 52.41 0.00e+00 754.00
IUUC-Mmr-060976 Microcebus murinus 52.03 0.00e+00 765.00
IUUC-Mdo-062741 Monodelphis domestica 52.03 0.00e+00 765.00
IUUC-Mmu-063905 Mus musculus 51.90 0.00e+00 763.00
IUUC-Mac-064718 Musa acuminata 76.40 0.00e+00 1191.00
IUUC-Mpu-066356 Mustela putorius furo 52.61 0.00e+00 763.00
IUUC-Mlu-067768 Myotis lucifugus 52.33 0.00e+00 762.00
IUUC-Nfi-068285 Neosartorya fischeri 37.61 2.00e-147 515.00
IUUC-Ncr-068883 Neurospora crassa 34.32 1.00e-130 459.00
IUUC-Nle-069638 Nomascus leucogenys 52.67 0.00e+00 763.00
IUUC-Opr-070333 Ochotona princeps 52.58 6.00e-161 560.00
IUUC-Ont-071601 Oreochromis niloticus 52.03 0.00e+00 773.00
IUUC-Oan-073281 Ornithorhynchus anatinus 53.34 0.00e+00 655.00
IUUC-Ocu-074504 Oryctolagus cuniculus 52.46 0.00e+00 763.00
IUUC-Oba-075332 Oryza barthii 79.11 0.00e+00 1212.00
IUUC-Obr-076435 Oryza brachyantha 79.70 0.00e+00 1139.00
IUUC-Ogl-077655 Oryza glaberrima 79.29 0.00e+00 1227.00
IUUC-Ogu-078458 Oryza glumaepatula 79.11 0.00e+00 1213.00
IUUC-Oin-079567 Oryza indica 79.15 0.00e+00 1225.00
IUUC-Olo-080930 Oryza longistaminata 77.84 0.00e+00 1204.00
IUUC-Ome-081353 Oryza meridionalis 79.29 0.00e+00 1225.00
IUUC-Oni-082378 Oryza nivara 79.29 0.00e+00 1227.00
IUUC-Opu-084055 Oryza punctata 79.01 0.00e+00 1227.00
IUUC-Oru-084202 Oryza rufipogon 78.98 0.00e+00 1210.00
IUUC-Osa-085290 Oryza sativa 79.15 0.00e+00 1226.00
IUUC-Ola-087562 Oryzias latipes 52.03 0.00e+00 765.00
IUUC-Olu-087866 Ostreococcus lucimarinus 42.31 5.00e-174 603.00
IUUC-Oga-088833 Otolemur garnettii 52.61 0.00e+00 763.00
IUUC-Oar-089958 Ovis aries 52.61 0.00e+00 763.00
IUUC-Ptr-091013 Pan troglodytes 52.16 0.00e+00 766.00
IUUC-Pan-091796 Papio anubis 52.39 0.00e+00 758.00
IUUC-Psi-093564 Pelodiscus sinensis 52.03 0.00e+00 750.00
IUUC-Pno-094939 Phaeosphaeria nodorum 35.86 2.00e-126 446.00
IUUC-Ppa-095920 Physcomitrella patens 75.75 0.00e+00 1172.00
IUUC-Pfo-096588 Poecilia formosa 51.97 0.00e+00 758.00
IUUC-Pab-098164 Pongo abelii 52.16 0.00e+00 766.00
IUUC-Pop-099497 Populus trichocarpa 86.77 0.00e+00 1346.00
IUUC-Pca-100702 Procavia capensis 47.84 0.00e+00 658.00
IUUC-Ppe-101271 Prunus persica 85.38 0.00e+00 1296.00
IUUC-Pva-103129 Pteropus vampyrus 52.03 0.00e+00 764.00
IUUC-Pte-104325 Pyrenophora teres 36.10 2.00e-125 442.00
IUUC-Pyt-104746 Pyrenophora triticirepentis 35.64 2.00e-123 436.00
IUUC-Rno-105935 Rattus norvegicus 52.61 0.00e+00 763.00
IUUC-Sha-106569 Sarcophilus harrisii 53.13 0.00e+00 694.00
IUUC-Sja-107676 Schizosaccharomyces japonicus 37.98 1.00e-144 506.00
IUUC-Smo-109555 Selaginella moellendorffii 75.63 0.00e+00 1165.00
IUUC-Sit-110763 Setaria italica 79.84 0.00e+00 1215.00
IUUC-Sly-111142 Solanum lycopersicum 83.74 0.00e+00 1276.00
IUUC-Stu-112580 Solanum tuberosum 84.02 0.00e+00 1282.00
IUUC-Sar-113144 Sorex araneus 52.58 4.00e-164 570.00
IUUC-Sbi-114690 Sorghum bicolor 79.70 0.00e+00 1232.00
IUUC-Sre-115005 Sporisorium reilianum 38.76 5.00e-143 501.00
IUUC-Ssc-116053 Sus scrofa 53.72 2.00e-166 578.00
IUUC-Tgu-116523 Taeniopygia guttata 52.61 0.00e+00 763.00
IUUC-Tru-118189 Takifugu rubripes 50.85 0.00e+00 708.00
IUUC-Tsy-118962 Tarsius syrichta 49.60 0.00e+00 698.00
IUUC-Tni-120614 Tetraodon nigroviridis 43.41 2.00e-160 559.00
IUUC-Tca-121282 Theobroma cacao 87.02 0.00e+00 1359.00
IUUC-Tre-122201 Trichoderma reesei 33.66 1.00e-123 436.00
IUUC-Tvi-122321 Trichoderma virens 34.37 8.00e-125 440.00
IUUC-Tae-124292 Triticum aestivum 78.88 0.00e+00 1193.00
IUUC-Tur-126800 Triticum urartu 78.88 0.00e+00 1192.00
IUUC-Tme-127053 Tuber melanosporum 40.90 5.00e-157 547.00
IUUC-Tbe-127427 Tupaia belangeri 47.72 2.00e-149 522.00
IUUC-Ttr-128662 Tursiops truncatus 51.54 0.00e+00 737.00
IUUC-Uma-129597 Ustilago maydis 38.37 2.00e-139 489.00
IUUC-Vda-129726 Verticillium dahliae 35.22 3.00e-130 458.00
IUUC-Vpa-130809 Vicugna pacos 50.27 6.00e-106 377.00
IUUC-Vvi-131630 Vitis vinifera 83.08 0.00e+00 1270.00
IUUC-Xtr-131887 Xenopus tropicalis 51.50 0.00e+00 757.00
IUUC-Xma-133517 Xiphophorus maculatus 52.03 0.00e+00 764.00
IUUC-Zma-135030 Zea mays 79.15 0.00e+00 1229.00
Created Date 25-Jun-2017

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