• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105202
UUCD1 version UUC-RaN-00814
Ensembl Protein ID ENSRNOP00000002299.4
UniProt Accession Q4V8B4; Q4V8B4_RAT
Genbank Protein ID AAH97460.1; EDL76730.1; EDL76731.1; EDL76732.1
Protein Name Chromatin assembly factor 1 subunit B; Chromatin assembly factor 1, subunit B (P60); Chromatin assembly factor 1, subunit B (P60), isoform CRA_a
Genbank Nucleotide ID AABR07033664; CH474083; CH474083; CH474083
Gene Name Chaf1b; rCG_53062
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000001692.6 ENSRNOT00000002299.6 ENSRNOP00000002299.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACmiRNAMapRAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlus
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.40e-22 77.4 127 162
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++++ +d ++++s+s D+t+ +WD+++g 
   Q: 127  GHLEDVYDICWaTDgNMMASASVDNTVIIWDVSKGQ 162
           89**********999****************99886 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MKVITCEIAW HNKEPVYSLD FQHAAACRIQ RLASAGVDTA VRIWKVEKGP DGKAIVEFLS 60
NLARHTKAVN VVRFSPTGEI LASGGDDAVI LLWKMNDSKE PEQIAFQDED EAQLNKENWT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105202|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAGAAAGTCT GTCTTGTGAC AGCCCGCCCA CGAGGGGGCG TGGCCTCCTG GAACCACGCC 60
TTCTGGGAGG CGTGATCGGA GGCGTGGCCT GCGGCGCGCG GGAAGCTGCG GGCAGTGGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105202|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR029129--CAF1_p60_C
IPR001632--Gprotein_B
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF15512--CAF-1_p60_C
PF00400--WD40
PRINTS

PR00319--GPROTEINB
SMART

SM00320--WD40
Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0006334--P:nucleosome assembly
KEGG rno:288242
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000474 Aegilops tauschii 39.85 3.00e-81 295.00
IUUC-Aml-001755 Ailuropoda melanoleuca 81.34 0.00e+00 914.00
IUUC-Atr-002674 Amborella trichopoda 40.24 1.00e-83 303.00
IUUC-Apl-003701 Anas platyrhynchos 72.26 0.00e+00 811.00
IUUC-Aca-004692 Anolis carolinensis 71.64 0.00e+00 779.00
IUUC-Aly-006286 Arabidopsis lyrata 40.00 7.00e-85 307.00
IUUC-Ath-007683 Arabidopsis thaliana 39.81 4.00e-85 308.00
IUUC-Ago-007940 Ashbya gossypii 32.63 1.00e-64 240.00
IUUC-Acl-008070 Aspergillus clavatus 42.33 2.00e-42 167.00
IUUC-Afl-008414 Aspergillus flavus 40.65 8.00e-42 165.00
IUUC-Afu-009046 Aspergillus fumigatus 34.10 1.00e-28 121.00
IUUC-Ani-009399 Aspergillus nidulans 42.79 5.00e-42 166.00
IUUC-Ang-009650 Aspergillus niger 38.25 4.00e-40 159.00
IUUC-Aor-009937 Aspergillus oryzae 40.65 8.00e-42 165.00
IUUC-Ate-010505 Aspergillus terreus 32.24 7.00e-27 115.00
IUUC-Ame-011094 Astyanax mexicanus 64.41 0.00e+00 668.00
IUUC-Bgr-012005 Blumeria graminis 38.10 1.00e-38 155.00
IUUC-Bta-013423 Bos taurus 79.29 0.00e+00 879.00
IUUC-Bci-013847 Botrytis cinerea 39.81 3.00e-39 157.00
IUUC-Bdi-014860 Brachypodium distachyon 41.83 8.00e-81 294.00
IUUC-Bol-016603 Brassica oleracea 38.48 1.00e-81 296.00
IUUC-Bra-017175 Brassica rapa 39.41 1.00e-78 286.00
IUUC-Cel-018272 Caenorhabditis elegans 34.62 4.00e-56 212.00
IUUC-Cja-019558 Callithrix jacchus 82.22 0.00e+00 910.00
IUUC-Cfa-020900 Canis familiaris 77.87 0.00e+00 883.00
IUUC-Cpo-022054 Cavia porcellus 74.91 0.00e+00 815.00
IUUC-Csa-023850 Chlorocebus sabaeus 82.69 0.00e+00 932.00
IUUC-Cho-024510 Choloepus hoffmanni 83.04 5.00e-141 494.00
IUUC-Cin-025178 Ciona intestinalis 40.87 1.00e-108 387.00
IUUC-Cgl-026572 Colletotrichum gloeosporioides 43.35 2.00e-36 147.00
IUUC-Cne-027015 Cryptococcus neoformans 36.00 1.00e-36 148.00
IUUC-Cme-027136 Cyanidioschyzon merolae 30.23 4.00e-57 215.00
IUUC-Dre-027879 Danio rerio 56.00 0.00e+00 660.00
IUUC-Dno-029335 Dasypus novemcinctus 83.42 0.00e+00 956.00
IUUC-Dor-030520 Dipodomys ordii 66.78 0.00e+00 690.00
IUUC-Dse-031566 Dothistroma septosporum 39.44 4.00e-41 163.00
IUUC-Dme-031838 Drosophila melanogaster 47.61 6.00e-109 388.00
IUUC-Eca-033563 Equus caballus 81.63 0.00e+00 950.00
IUUC-Fca-036052 Felis catus 78.62 0.00e+00 888.00
IUUC-Fal-037080 Ficedula albicollis 72.36 0.00e+00 808.00
IUUC-Fox-038022 Fusarium oxysporum 41.31 3.00e-40 160.00
IUUC-Fso-038115 Fusarium solani 41.78 4.00e-39 156.00
IUUC-Gmo-039461 Gadus morhua 72.99 5.00e-139 486.00
IUUC-Ggr-040100 Gaeumannomyces graminis 39.81 9.00e-40 158.00
IUUC-Gga-041133 Gallus gallus 71.94 0.00e+00 801.00
IUUC-Gac-041769 Gasterosteus aculeatus 66.33 0.00e+00 684.00
IUUC-Gma-043339 Glycine max 40.59 2.00e-92 333.00
IUUC-Ggo-044561 Gorilla gorilla 82.39 0.00e+00 925.00
IUUC-Hsa-046150 Homo sapiens 83.04 0.00e+00 934.00
IUUC-Hvu-047792 Hordeum vulgare 39.31 5.00e-52 197.00
IUUC-Itr-048630 Ictidomys tridecemlineatus 85.83 0.00e+00 889.00
IUUC-Kpa-049397 Komagataella pastoris 39.50 3.00e-84 305.00
IUUC-Lch-050365 Latimeria chalumnae 52.65 6.00e-142 497.00
IUUC-Lpe-050875 Leersia perrieri 40.10 2.00e-80 293.00
IUUC-Loc-052770 Lepisosteus oculatus 68.92 0.00e+00 693.00
IUUC-Lma-053291 Leptosphaeria maculans 38.50 6.00e-40 159.00
IUUC-Laf-053505 Loxodonta africana 83.25 0.00e+00 972.00
IUUC-Mcc-054803 Macaca mulatta 82.86 0.00e+00 934.00
IUUC-Meu-056578 Macropus eugenii 66.96 0.00e+00 744.00
IUUC-Mor-057211 Magnaporthe oryzae 39.15 3.00e-38 153.00
IUUC-Mpo-057411 Magnaporthe poae 39.34 6.00e-39 155.00
IUUC-Mtr-058066 Medicago truncatula 41.83 7.00e-92 331.00
IUUC-Mga-059735 Meleagris gallopavo 71.89 0.00e+00 807.00
IUUC-Mvi-060288 Microbotryum violaceum 30.22 8.00e-32 132.00
IUUC-Mmr-061343 Microcebus murinus 82.62 0.00e+00 968.00
IUUC-Mdo-062065 Monodelphis domestica 76.16 0.00e+00 842.00
IUUC-Mmu-063501 Mus musculus 91.78 0.00e+00 1007.00
IUUC-Mac-064864 Musa acuminata 38.14 1.00e-80 293.00
IUUC-Mpu-066549 Mustela putorius furo 79.54 0.00e+00 877.00
IUUC-Mlu-067121 Myotis lucifugus 74.73 0.00e+00 826.00
IUUC-Nfi-068462 Neosartorya fischeri 42.79 6.00e-43 169.00
IUUC-Ncr-068838 Neurospora crassa 37.85 4.00e-39 156.00
IUUC-Nle-069854 Nomascus leucogenys 83.22 0.00e+00 927.00
IUUC-Opr-070803 Ochotona princeps 74.34 0.00e+00 825.00
IUUC-Ont-071642 Oreochromis niloticus 66.27 0.00e+00 672.00
IUUC-Oan-073675 Ornithorhynchus anatinus 75.00 0.00e+00 835.00
IUUC-Ocu-073863 Oryctolagus cuniculus 89.46 0.00e+00 740.00
IUUC-Oba-075682 Oryza barthii 40.10 5.00e-77 281.00
IUUC-Obr-076039 Oryza brachyantha 41.23 6.00e-83 301.00
IUUC-Ogu-078021 Oryza glumaepatula 41.09 1.00e-81 297.00
IUUC-Oin-079908 Oryza indica 36.47 1.00e-62 233.00
IUUC-Olo-081063 Oryza longistaminata 41.09 9.00e-82 297.00
IUUC-Ome-081930 Oryza meridionalis 41.09 1.00e-81 297.00
IUUC-Oni-082547 Oryza nivara 41.09 8.00e-82 297.00
IUUC-Opu-084089 Oryza punctata 40.35 5.00e-79 289.00
IUUC-Oru-084844 Oryza rufipogon 41.09 1.00e-81 297.00
IUUC-Osa-085582 Oryza sativa 41.09 1.00e-81 297.00
IUUC-Ola-087187 Oryzias latipes 61.88 0.00e+00 684.00
IUUC-Olu-087792 Ostreococcus lucimarinus 38.63 2.00e-76 279.00
IUUC-Oga-088390 Otolemur garnettii 79.96 0.00e+00 932.00
IUUC-Oar-089740 Ovis aries 78.65 0.00e+00 847.00
IUUC-Ptr-091581 Pan troglodytes 83.04 0.00e+00 935.00
IUUC-Pan-092258 Papio anubis 75.61 0.00e+00 838.00
IUUC-Psi-093761 Pelodiscus sinensis 73.32 0.00e+00 835.00
IUUC-Ppa-095428 Physcomitrella patens 39.00 9.00e-93 334.00
IUUC-Pfo-097357 Poecilia formosa 65.80 0.00e+00 672.00
IUUC-Pab-098520 Pongo abelii 82.33 0.00e+00 929.00
IUUC-Pop-099331 Populus trichocarpa 37.01 2.00e-86 312.00
IUUC-Ppe-101548 Prunus persica 38.55 3.00e-83 302.00
IUUC-Pva-103243 Pteropus vampyrus 80.38 0.00e+00 833.00
IUUC-Pgr-103591 Puccinia graminis 32.59 5.00e-35 143.00
IUUC-Pte-104247 Pyrenophora teres 39.44 5.00e-40 159.00
IUUC-Pyt-104641 Pyrenophora triticirepentis 39.44 6.00e-40 159.00
IUUC-Sce-106250 Saccharomyces cerevisiae 33.19 3.00e-71 262.00
IUUC-Sha-107036 Sarcophilus harrisii 78.32 0.00e+00 887.00
IUUC-Sja-107912 Schizosaccharomyces japonicus 36.38 4.00e-76 278.00
IUUC-Spo-108050 Schizosaccharomyces pombe 34.18 6.00e-72 265.00
IUUC-Ssl-108607 Sclerotinia sclerotiorum 37.45 2.00e-39 157.00
IUUC-Sit-109838 Setaria italica 42.16 1.00e-83 303.00
IUUC-Sly-110872 Solanum lycopersicum 38.81 7.00e-83 301.00
IUUC-Stu-111933 Solanum tuberosum 38.33 6.00e-80 291.00
IUUC-Sbi-114587 Sorghum bicolor 41.03 2.00e-84 306.00
IUUC-Ssc-115462 Sus scrofa 81.63 0.00e+00 926.00
IUUC-Tgu-117186 Taeniopygia guttata 71.23 0.00e+00 778.00
IUUC-Tru-118310 Takifugu rubripes 65.21 0.00e+00 672.00
IUUC-Tsy-118927 Tarsius syrichta 74.32 0.00e+00 690.00
IUUC-Tni-120832 Tetraodon nigroviridis 59.17 0.00e+00 659.00
IUUC-Tca-121584 Theobroma cacao 37.81 5.00e-86 311.00
IUUC-Tre-122140 Trichoderma reesei 40.19 4.00e-39 156.00
IUUC-Tvi-122663 Trichoderma virens 41.59 2.00e-39 157.00
IUUC-Tae-124063 Triticum aestivum 40.20 7.00e-81 294.00
IUUC-Tur-126239 Triticum urartu 39.85 2.00e-81 296.00
IUUC-Tme-127108 Tuber melanosporum 40.28 2.00e-80 293.00
IUUC-Ttr-129010 Tursiops truncatus 80.92 0.00e+00 906.00
IUUC-Vda-129825 Verticillium dahliae 42.92 2.00e-41 164.00
IUUC-Vpa-130374 Vicugna pacos 78.28 8.00e-99 354.00
IUUC-Vvi-131136 Vitis vinifera 38.69 1.00e-83 303.00
IUUC-Xtr-132141 Xenopus tropicalis 75.74 0.00e+00 711.00
IUUC-Xma-133980 Xiphophorus maculatus 75.50 0.00e+00 665.00
IUUC-Yli-134457 Yarrowia lipolytica 38.39 1.00e-37 151.00
IUUC-Zma-135321 Zea mays 41.65 3.00e-84 305.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved