iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCl+++    ++++CgH+f+  C+ ++  l+ s+++  +CP+C
   Q: 225  CPICLYPPTA-AKITRCGHIFCWACILHY--LSLSERTWSKCPIC 266
           ********99.99*************999..5556777779**** PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPQSSPSTAA TASDMDKNSG SNSSSASSGS SKGQQPPRSA SAGPAGESKP KSDGKNSNGS 60
KRYNRKREPS YPKNENFSNQ SRRSNSQKSK TFNKTPPQRG GGSSKPFSSS SNGGRRDEVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTCGTCGC CATTCCCGGA GCAGCTCGGC CTCGGCCCAG AGGCGAGTGT CGGTCGCTGT 60
GTCGGAGACC CCGGTCCCCG GCACCGAGAC AACCAGCCCT CTCTCCTGCC CCGCGGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0051865--P:protein autoubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000074	Aegilops tauschii	33.81	2.00e-34	140.00
IUUC-Aml-002043	Ailuropoda melanoleuca	90.86	0.00e+00	945.00
IUUC-Atr-003135	Amborella trichopoda	36.67	1.00e-30	128.00
IUUC-Apl-003850	Anas platyrhynchos	70.79	0.00e+00	781.00
IUUC-Aca-005315	Anolis carolinensis	70.33	0.00e+00	955.00
IUUC-Aly-005597	Arabidopsis lyrata	31.89	4.00e-25	110.00
IUUC-Ago-007969	Ashbya gossypii	29.19	4.00e-15	76.60
IUUC-Acl-008291	Aspergillus clavatus	30.08	1.00e-24	108.00
IUUC-Afl-008511	Aspergillus flavus	26.60	7.00e-37	149.00
IUUC-Afu-008924	Aspergillus fumigatus	31.38	7.00e-24	105.00
IUUC-Ani-009492	Aspergillus nidulans	25.41	2.00e-31	130.00
IUUC-Ang-009588	Aspergillus niger	31.91	3.00e-25	110.00
IUUC-Aor-010006	Aspergillus oryzae	26.80	8.00e-37	148.00
IUUC-Ate-010373	Aspergillus terreus	24.74	3.00e-32	133.00
IUUC-Ame-011589	Astyanax mexicanus	58.49	0.00e+00	729.00
IUUC-Bgr-012151	Blumeria graminis	30.81	2.00e-21	97.10
IUUC-Bta-012512	Bos taurus	90.74	0.00e+00	1295.00
IUUC-Bci-013967	Botrytis cinerea	26.61	2.00e-22	101.00
IUUC-Bdi-014819	Brachypodium distachyon	37.04	2.00e-34	140.00
IUUC-Bol-015780	Brassica oleracea	31.17	6.00e-28	119.00
IUUC-Bra-016966	Brassica rapa	36.69	6.00e-28	119.00
IUUC-Cja-019028	Callithrix jacchus	88.60	0.00e+00	1257.00
IUUC-Cfa-021190	Canis familiaris	90.54	0.00e+00	1251.00
IUUC-Cpo-021765	Cavia porcellus	89.51	0.00e+00	1327.00
IUUC-Cre-022687	Chlamydomonas reinhardtii	31.25	5.00e-09	55.50
IUUC-Csa-023675	Chlorocebus sabaeus	90.78	0.00e+00	1233.00
IUUC-Cho-024480	Choloepus hoffmanni	87.04	0.00e+00	985.00
IUUC-Cin-025421	Ciona intestinalis	34.25	4.00e-51	196.00
IUUC-Csv-026061	Ciona savignyi	36.51	3.00e-88	319.00
IUUC-Cgl-026594	Colletotrichum gloeosporioides	28.73	1.00e-26	115.00
IUUC-Cne-026993	Cryptococcus neoformans	33.33	4.00e-17	83.60
IUUC-Dre-027622	Danio rerio	57.22	0.00e+00	705.00
IUUC-Dno-029504	Dasypus novemcinctus	87.20	0.00e+00	1242.00
IUUC-Dor-030517	Dipodomys ordii	89.92	0.00e+00	1013.00
IUUC-Dse-031271	Dothistroma septosporum	25.35	1.00e-30	128.00
IUUC-Dme-031728	Drosophila melanogaster	41.51	8.00e-49	188.00
IUUC-Ete-032954	Echinops telfairi	63.19	2.00e-106	379.00
IUUC-Eca-033210	Equus caballus	90.27	0.00e+00	1350.00
IUUC-Eeu-034741	Erinaceus europaeus	77.56	0.00e+00	702.00
IUUC-Fca-035704	Felis catus	90.54	0.00e+00	1248.00
IUUC-Fal-037450	Ficedula albicollis	71.61	0.00e+00	908.00
IUUC-Fox-037977	Fusarium oxysporum	33.18	8.00e-25	108.00
IUUC-Fso-038372	Fusarium solani	32.72	2.00e-26	114.00
IUUC-Gmo-038682	Gadus morhua	55.90	0.00e+00	714.00
IUUC-Ggr-039911	Gaeumannomyces graminis	31.40	1.00e-23	105.00
IUUC-Gga-040648	Gallus gallus	72.35	0.00e+00	927.00
IUUC-Gac-042056	Gasterosteus aculeatus	54.29	0.00e+00	670.00
IUUC-Gma-043144	Glycine max	34.39	9.00e-28	118.00
IUUC-Ggo-045420	Gorilla gorilla	91.10	0.00e+00	1306.00
IUUC-Hsa-046729	Homo sapiens	90.88	0.00e+00	1325.00
IUUC-Hvu-047535	Hordeum vulgare	37.36	8.00e-35	141.00
IUUC-Itr-048580	Ictidomys tridecemlineatus	88.21	0.00e+00	1223.00
IUUC-Kpa-049131	Komagataella pastoris	27.07	9.00e-13	68.60
IUUC-Lch-050373	Latimeria chalumnae	66.37	0.00e+00	907.00
IUUC-Lpe-051155	Leersia perrieri	28.66	5.00e-53	202.00
IUUC-Loc-052182	Lepisosteus oculatus	59.47	0.00e+00	757.00
IUUC-Lma-053242	Leptosphaeria maculans	26.71	2.00e-23	105.00
IUUC-Laf-054048	Loxodonta africana	89.34	0.00e+00	1229.00
IUUC-Mcc-055802	Macaca mulatta	90.53	0.00e+00	1288.00
IUUC-Meu-056641	Macropus eugenii	60.50	1.00e-103	371.00
IUUC-Mor-057233	Magnaporthe oryzae	32.04	7.00e-24	105.00
IUUC-Mtr-057767	Medicago truncatula	30.44	7.00e-52	198.00
IUUC-Mla-058967	Melampsora laricipopulina	27.27	2.00e-35	144.00
IUUC-Mga-059783	Meleagris gallopavo	71.75	0.00e+00	956.00
IUUC-Mvi-060430	Microbotryum violaceum	28.39	9.00e-45	175.00
IUUC-Mmr-060953	Microcebus murinus	90.12	0.00e+00	1272.00
IUUC-Mdo-063070	Monodelphis domestica	76.72	0.00e+00	1071.00
IUUC-Mmu-064077	Mus musculus	96.02	0.00e+00	1220.00
IUUC-Mac-065163	Musa acuminata	35.29	3.00e-29	123.00
IUUC-Mpu-066698	Mustela putorius furo	90.82	0.00e+00	1248.00
IUUC-Mlu-067126	Myotis lucifugus	88.55	0.00e+00	1217.00
IUUC-Nfi-068605	Neosartorya fischeri	31.91	2.00e-24	107.00
IUUC-Ncr-068754	Neurospora crassa	31.17	2.00e-20	94.40
IUUC-Nle-070138	Nomascus leucogenys	90.98	0.00e+00	1277.00
IUUC-Opr-070959	Ochotona princeps	81.65	0.00e+00	1138.00
IUUC-Ont-072344	Oreochromis niloticus	56.32	0.00e+00	691.00
IUUC-Oan-073664	Ornithorhynchus anatinus	82.03	7.00e-162	564.00
IUUC-Ocu-074463	Oryctolagus cuniculus	82.76	0.00e+00	1097.00
IUUC-Oba-075523	Oryza barthii	34.29	2.00e-34	140.00
IUUC-Obr-076032	Oryza brachyantha	32.08	8.00e-34	138.00
IUUC-Ogl-077231	Oryza glaberrima	34.29	4.00e-34	139.00
IUUC-Ogu-078117	Oryza glumaepatula	28.57	2.00e-54	207.00
IUUC-Oin-079998	Oryza indica	33.33	2.00e-33	137.00
IUUC-Olo-080870	Oryza longistaminata	34.29	1.00e-33	138.00
IUUC-Ome-081402	Oryza meridionalis	32.92	3.00e-34	140.00
IUUC-Oni-082566	Oryza nivara	34.29	2.00e-34	140.00
IUUC-Opu-083226	Oryza punctata	29.22	1.00e-55	211.00
IUUC-Oru-084192	Oryza rufipogon	33.33	9.00e-34	138.00
IUUC-Osa-086156	Oryza sativa	31.67	3.00e-34	140.00
IUUC-Ola-086980	Oryzias latipes	56.89	0.00e+00	700.00
IUUC-Olu-087613	Ostreococcus lucimarinus	37.40	1.00e-18	88.60
IUUC-Oga-088829	Otolemur garnettii	86.62	0.00e+00	1185.00
IUUC-Oar-089979	Ovis aries	90.13	0.00e+00	1244.00
IUUC-Ptr-091080	Pan troglodytes	90.63	0.00e+00	1318.00
IUUC-Pan-092604	Papio anubis	90.88	0.00e+00	1295.00
IUUC-Psi-093248	Pelodiscus sinensis	72.56	0.00e+00	954.00
IUUC-Pma-094260	Petromyzon marinus	47.42	3.00e-57	216.00
IUUC-Pno-095113	Phaeosphaeria nodorum	31.41	2.00e-22	101.00
IUUC-Pfo-097012	Poecilia formosa	56.37	0.00e+00	660.00
IUUC-Pab-098745	Pongo abelii	89.60	0.00e+00	1005.00
IUUC-Pop-099889	Populus trichocarpa	36.05	2.00e-28	121.00
IUUC-Pca-100895	Procavia capensis	81.60	0.00e+00	1100.00
IUUC-Pva-102617	Pteropus vampyrus	89.46	0.00e+00	1239.00
IUUC-Pgr-103385	Puccinia graminis	28.74	1.00e-37	151.00
IUUC-Ptt-103845	Puccinia triticina	28.71	8.00e-38	152.00
IUUC-Pte-104025	Pyrenophora teres	26.52	2.00e-23	104.00
IUUC-Pyt-104699	Pyrenophora triticirepentis	27.70	3.00e-22	100.00
IUUC-Sce-106225	Saccharomyces cerevisiae	26.04	1.00e-11	65.10
IUUC-Sha-106788	Sarcophilus harrisii	78.51	0.00e+00	1026.00
IUUC-Spo-108070	Schizosaccharomyces pombe	33.33	3.00e-29	123.00
IUUC-Ssl-108567	Sclerotinia sclerotiorum	26.61	8.00e-21	95.50
IUUC-Sly-110950	Solanum lycopersicum	38.53	3.00e-19	89.70
IUUC-Sar-113085	Sorex araneus	84.68	0.00e+00	1091.00
IUUC-Sbi-114553	Sorghum bicolor	38.01	1.00e-33	138.00
IUUC-Sre-115103	Sporisorium reilianum	39.86	1.00e-28	122.00
IUUC-Ssc-115675	Sus scrofa	87.92	0.00e+00	920.00
IUUC-Tgu-116506	Taeniopygia guttata	68.13	0.00e+00	913.00
IUUC-Tru-118158	Takifugu rubripes	56.87	0.00e+00	687.00
IUUC-Tsy-119477	Tarsius syrichta	82.74	0.00e+00	1102.00
IUUC-Tni-120482	Tetraodon nigroviridis	52.01	0.00e+00	673.00
IUUC-Tca-120997	Theobroma cacao	30.00	8.00e-51	195.00
IUUC-Tre-121948	Trichoderma reesei	32.57	2.00e-26	114.00
IUUC-Tvi-122648	Trichoderma virens	31.34	3.00e-25	110.00
IUUC-Tae-124316	Triticum aestivum	33.81	4.00e-35	143.00
IUUC-Tme-127224	Tuber melanosporum	25.75	2.00e-19	90.90
IUUC-Tbe-128091	Tupaia belangeri	89.26	7.00e-173	600.00
IUUC-Ttr-128830	Tursiops truncatus	80.64	0.00e+00	1127.00
IUUC-Uma-129360	Ustilago maydis	40.00	4.00e-28	120.00
IUUC-Vda-129856	Verticillium dahliae	34.46	1.00e-20	95.10
IUUC-Vpa-130094	Vicugna pacos	86.74	0.00e+00	939.00
IUUC-Vvi-131165	Vitis vinifera	37.42	6.00e-26	112.00
IUUC-Xtr-132916	Xenopus tropicalis	60.86	0.00e+00	802.00
IUUC-Xma-134009	Xiphophorus maculatus	69.96	2.00e-81	294.00
IUUC-Yli-134346	Yarrowia lipolytica	27.13	5.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence