iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074705

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Helicase-like transcription factor

Genbank Nucleotide ID

AAGW02015054

Gene Name

HLTF

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000003520.3	ENSOCUT00000003522.3	ENSOCUP00000003055.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.90e-07	29.6	757	798

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiCl+++   p+++ C Hvf++ C+ q      ++++++++CPlCr
   Q: 757  CAICLDSLTV-PVITHCAHVFCKPCIcQV----IQNEQPHAKCPLCR 798
           ********88.999************444....599**********8 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSWMFKRDPV WKYLQTVQYG VHGNFSRLSY PTFFPRFEFQ DIIPPDDFLT SDEELDSVLF 60
GTLRGHVVGL RYYTGVVNNN EMVALQREPN NPYDKNAIKV NNVNGNQVGY LKKELAAALA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCCTCTC GTGATTGGGT GGTCCTAACG CCAGTCAGAG CGTCGCTGGT CTCTCGTATT 60
GTTGCTGGAA GGAAACGGCG ACGACGTCTG ATTAGACCCG CGGCGTCTTT CCCTGTCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR030065--HLTF
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0005524--F:ATP binding
GO:0016887--F:ATPase activity
GO:0003723--F:RNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006301--P:postreplication repair
GO:0000209--P:protein polyubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	38.57	5.00e-108	385.00
IUUC-Aml-001237	Ailuropoda melanoleuca	93.47	0.00e+00	1828.00
IUUC-Atr-003058	Amborella trichopoda	38.17	4.00e-106	379.00
IUUC-Aca-004994	Anolis carolinensis	65.56	0.00e+00	1240.00
IUUC-Aly-005898	Arabidopsis lyrata	43.25	1.00e-117	417.00
IUUC-Ath-007559	Arabidopsis thaliana	42.18	4.00e-119	422.00
IUUC-Ago-007997	Ashbya gossypii	34.12	4.00e-77	283.00
IUUC-Acl-008022	Aspergillus clavatus	30.50	2.00e-76	281.00
IUUC-Afl-008697	Aspergillus flavus	34.83	2.00e-83	304.00
IUUC-Afu-008767	Aspergillus fumigatus	35.16	2.00e-84	307.00
IUUC-Ani-009435	Aspergillus nidulans	35.43	2.00e-81	297.00
IUUC-Ang-009874	Aspergillus niger	33.96	3.00e-82	300.00
IUUC-Aor-010130	Aspergillus oryzae	35.48	1.00e-84	307.00
IUUC-Ate-010582	Aspergillus terreus	33.69	4.00e-77	283.00
IUUC-Ame-011743	Astyanax mexicanus	58.77	0.00e+00	636.00
IUUC-Bgr-012147	Blumeria graminis	34.42	1.00e-83	304.00
IUUC-Bta-013391	Bos taurus	91.87	0.00e+00	1825.00
IUUC-Bci-013741	Botrytis cinerea	39.08	6.00e-45	176.00
IUUC-Bdi-014267	Brachypodium distachyon	39.68	1.00e-115	410.00
IUUC-Bol-016075	Brassica oleracea	42.67	2.00e-120	426.00
IUUC-Bra-017057	Brassica rapa	43.12	7.00e-120	424.00
IUUC-Cja-019685	Callithrix jacchus	91.67	0.00e+00	1897.00
IUUC-Cfa-020485	Canis familiaris	92.96	0.00e+00	1818.00
IUUC-Cpo-021361	Cavia porcellus	89.39	0.00e+00	1055.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	29.58	2.00e-63	238.00
IUUC-Csa-023894	Chlorocebus sabaeus	92.17	0.00e+00	1846.00
IUUC-Cho-024891	Choloepus hoffmanni	94.44	0.00e+00	716.00
IUUC-Csv-026168	Ciona savignyi	29.57	3.00e-30	127.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	34.40	3.00e-87	317.00
IUUC-Cne-026829	Cryptococcus neoformans	36.93	4.00e-91	329.00
IUUC-Cme-027110	Cyanidioschyzon merolae	33.45	1.00e-88	321.00
IUUC-Dre-027867	Danio rerio	62.85	0.00e+00	703.00
IUUC-Dno-029517	Dasypus novemcinctus	91.28	0.00e+00	1776.00
IUUC-Dor-030590	Dipodomys ordii	87.90	0.00e+00	727.00
IUUC-Dse-031471	Dothistroma septosporum	30.11	9.00e-76	278.00
IUUC-Dme-031815	Drosophila melanogaster	30.81	5.00e-53	202.00
IUUC-Ete-032421	Echinops telfairi	74.23	0.00e+00	963.00
IUUC-Eca-034058	Equus caballus	91.45	0.00e+00	1772.00
IUUC-Eeu-034597	Erinaceus europaeus	74.73	0.00e+00	1373.00
IUUC-Fca-035390	Felis catus	92.85	0.00e+00	1803.00
IUUC-Fox-038039	Fusarium oxysporum	34.22	4.00e-90	326.00
IUUC-Fso-038179	Fusarium solani	33.96	1.00e-87	318.00
IUUC-Gmo-038544	Gadus morhua	54.20	0.00e+00	653.00
IUUC-Ggr-039735	Gaeumannomyces graminis	31.56	1.00e-73	271.00
IUUC-Gac-042401	Gasterosteus aculeatus	51.71	0.00e+00	955.00
IUUC-Gma-044315	Glycine max	38.16	2.00e-100	360.00
IUUC-Ggo-045628	Gorilla gorilla	91.72	0.00e+00	1816.00
IUUC-Hsa-045930	Homo sapiens	92.17	0.00e+00	1842.00
IUUC-Hvu-047747	Hordeum vulgare	38.21	6.00e-108	385.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	92.50	0.00e+00	1858.00
IUUC-Kpa-049087	Komagataella pastoris	33.86	1.00e-82	301.00
IUUC-Lch-050617	Latimeria chalumnae	61.79	0.00e+00	1097.00
IUUC-Lpe-051724	Leersia perrieri	42.46	2.00e-120	426.00
IUUC-Loc-052785	Lepisosteus oculatus	65.11	0.00e+00	753.00
IUUC-Lma-052956	Leptosphaeria maculans	30.88	6.00e-77	283.00
IUUC-Laf-054309	Loxodonta africana	88.19	0.00e+00	1674.00
IUUC-Mcc-055493	Macaca mulatta	91.69	0.00e+00	1825.00
IUUC-Meu-056270	Macropus eugenii	77.49	0.00e+00	918.00
IUUC-Mor-056943	Magnaporthe oryzae	36.13	1.00e-90	328.00
IUUC-Mpo-057407	Magnaporthe poae	32.11	5.00e-79	289.00
IUUC-Mtr-058172	Medicago truncatula	42.02	6.00e-113	401.00
IUUC-Mla-059170	Melampsora laricipopulina	32.23	1.00e-73	271.00
IUUC-Mvi-060365	Microbotryum violaceum	33.83	7.00e-84	305.00
IUUC-Mmr-061043	Microcebus murinus	90.38	0.00e+00	1716.00
IUUC-Mdo-062919	Monodelphis domestica	81.04	0.00e+00	1497.00
IUUC-Mmu-064338	Mus musculus	84.11	0.00e+00	1663.00
IUUC-Mac-065666	Musa acuminata	35.19	5.00e-86	313.00
IUUC-Mpu-066781	Mustela putorius furo	93.25	0.00e+00	1819.00
IUUC-Mlu-068076	Myotis lucifugus	90.90	0.00e+00	1769.00
IUUC-Nfi-068386	Neosartorya fischeri	34.80	4.00e-82	299.00
IUUC-Ncr-068858	Neurospora crassa	37.04	5.00e-87	316.00
IUUC-Nle-069947	Nomascus leucogenys	92.17	0.00e+00	1845.00
IUUC-Opr-070388	Ochotona princeps	87.37	0.00e+00	1185.00
IUUC-Ont-071782	Oreochromis niloticus	61.01	0.00e+00	669.00
IUUC-Oan-073331	Ornithorhynchus anatinus	80.07	0.00e+00	1335.00
IUUC-Oba-075881	Oryza barthii	42.35	3.00e-118	419.00
IUUC-Obr-076344	Oryza brachyantha	41.56	8.00e-114	404.00
IUUC-Ogl-076957	Oryza glaberrima	42.35	3.00e-118	419.00
IUUC-Ogu-078648	Oryza glumaepatula	41.68	5.00e-113	402.00
IUUC-Oin-079449	Oryza indica	41.79	1.00e-113	404.00
IUUC-Olo-080721	Oryza longistaminata	41.79	2.00e-114	406.00
IUUC-Ome-081579	Oryza meridionalis	41.40	6.00e-114	405.00
IUUC-Oni-083054	Oryza nivara	41.79	1.00e-113	404.00
IUUC-Opu-083706	Oryza punctata	41.88	3.00e-114	405.00
IUUC-Oru-085259	Oryza rufipogon	41.79	1.00e-113	404.00
IUUC-Osa-085568	Oryza sativa	42.03	3.00e-99	356.00
IUUC-Ola-086830	Oryzias latipes	51.40	0.00e+00	929.00
IUUC-Olu-087669	Ostreococcus lucimarinus	28.80	2.00e-56	214.00
IUUC-Oga-088120	Otolemur garnettii	86.48	0.00e+00	1631.00
IUUC-Oar-089293	Ovis aries	91.50	0.00e+00	1827.00
IUUC-Ptr-091418	Pan troglodytes	92.17	0.00e+00	1846.00
IUUC-Pan-092579	Papio anubis	91.39	0.00e+00	1393.00
IUUC-Psi-093626	Pelodiscus sinensis	70.52	0.00e+00	1205.00
IUUC-Pno-094841	Phaeosphaeria nodorum	38.65	1.00e-86	314.00
IUUC-Ppa-095291	Physcomitrella patens	45.61	5.00e-142	498.00
IUUC-Pfo-096540	Poecilia formosa	52.08	0.00e+00	961.00
IUUC-Pab-098010	Pongo abelii	92.47	0.00e+00	1847.00
IUUC-Pop-099320	Populus trichocarpa	38.55	5.00e-105	375.00
IUUC-Pca-100648	Procavia capensis	77.18	0.00e+00	1472.00
IUUC-Ppe-102077	Prunus persica	43.09	4.00e-99	355.00
IUUC-Pva-102896	Pteropus vampyrus	90.42	0.00e+00	896.00
IUUC-Pgr-103403	Puccinia graminis	31.01	6.00e-73	269.00
IUUC-Ptt-103966	Puccinia triticina	31.69	7.00e-72	265.00
IUUC-Pte-104242	Pyrenophora teres	31.56	9.00e-79	288.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	31.43	9.00e-79	288.00
IUUC-Rno-106130	Rattus norvegicus	83.90	0.00e+00	1658.00
IUUC-Sce-106159	Saccharomyces cerevisiae	32.64	6.00e-80	291.00
IUUC-Sha-107221	Sarcophilus harrisii	82.22	0.00e+00	1524.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	35.04	2.00e-87	317.00
IUUC-Spo-108305	Schizosaccharomyces pombe	31.21	5.00e-80	292.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	34.58	2.00e-85	311.00
IUUC-Smo-109629	Selaginella moellendorffii	43.43	5.00e-128	451.00
IUUC-Sit-109770	Setaria italica	42.78	2.00e-116	413.00
IUUC-Sly-111908	Solanum lycopersicum	38.11	1.00e-106	381.00
IUUC-Stu-112600	Solanum tuberosum	38.10	3.00e-106	379.00
IUUC-Sar-113719	Sorex araneus	91.21	0.00e+00	1663.00
IUUC-Sbi-113927	Sorghum bicolor	37.39	1.00e-100	360.00
IUUC-Sre-114938	Sporisorium reilianum	29.05	1.00e-74	275.00
IUUC-Ssc-116186	Sus scrofa	93.08	0.00e+00	1867.00
IUUC-Tru-117768	Takifugu rubripes	51.78	0.00e+00	919.00
IUUC-Tsy-118957	Tarsius syrichta	84.85	0.00e+00	1638.00
IUUC-Tni-120618	Tetraodon nigroviridis	51.80	0.00e+00	952.00
IUUC-Tca-121146	Theobroma cacao	37.37	1.00e-107	384.00
IUUC-Tre-121896	Trichoderma reesei	34.84	5.00e-95	342.00
IUUC-Tvi-122597	Trichoderma virens	33.77	3.00e-90	327.00
IUUC-Tae-123773	Triticum aestivum	41.56	6.00e-106	378.00
IUUC-Tur-125999	Triticum urartu	38.57	1.00e-107	384.00
IUUC-Tme-126953	Tuber melanosporum	33.63	1.00e-86	314.00
IUUC-Tbe-127612	Tupaia belangeri	82.55	0.00e+00	783.00
IUUC-Ttr-128243	Tursiops truncatus	87.25	0.00e+00	1330.00
IUUC-Uma-129441	Ustilago maydis	29.22	4.00e-75	276.00
IUUC-Vda-129933	Verticillium dahliae	37.21	6.00e-82	299.00
IUUC-Vpa-130672	Vicugna pacos	92.24	0.00e+00	1671.00
IUUC-Vvi-131204	Vitis vinifera	44.09	1.00e-121	431.00
IUUC-Xtr-132730	Xenopus tropicalis	62.00	0.00e+00	1221.00
IUUC-Xma-133384	Xiphophorus maculatus	53.14	0.00e+00	952.00
IUUC-Yli-134350	Yarrowia lipolytica	31.83	1.00e-75	278.00
IUUC-Zma-134966	Zea mays	42.88	1.00e-123	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence