iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s05510	POPTR_0014s05510.2	POPTR_0014s05510.2
POPTR_0014s05510	POPTR_0014s05510.1	POPTR_0014s05510.1
POPTR_0014s05510	POPTR_0014s05510.3	POPTR_0014s05510.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.9	827	865

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCl+++k+  +++ C H+f+  C+q++     ++s++ +CP+C
   Q: 827  CSICLDRPKE-AVITKCYHLFCNPCIQRI-----VESRHRKCPVC 865
           ********99.888**************9.....8********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSTGEPDRK RRHFSSISSP TAAMAKKQPL SHLSEDKKLD TAVLQYQNQK LQQKLEAQKV 60
EHSALENKFS LQKEKQKPYN STLKAVNKSW EVLVTDLETC SNRTREWING QDVKHVPITR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTGCCGAG CAGAGGCCGA AGAAGAAATG AAAAATAAAG AAAAAGAAAA AGATTTAAAC 60
TTCTTTTGTT CTTTTAATTC TCAGTTTGAG AAAGGAAATC AAATTTCATA GTAAGTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0014s05510g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000994	Aegilops tauschii	39.01	3.00e-140	492.00
IUUC-Aml-002295	Ailuropoda melanoleuca	30.03	1.00e-38	154.00
IUUC-Atr-002836	Amborella trichopoda	55.24	0.00e+00	855.00
IUUC-Aly-006055	Arabidopsis lyrata	56.75	0.00e+00	914.00
IUUC-Ath-007462	Arabidopsis thaliana	56.98	0.00e+00	914.00
IUUC-Ame-011745	Astyanax mexicanus	29.11	1.00e-35	144.00
IUUC-Bta-013173	Bos taurus	30.84	8.00e-39	155.00
IUUC-Bdi-014799	Brachypodium distachyon	47.02	0.00e+00	676.00
IUUC-Bol-015421	Brassica oleracea	55.57	0.00e+00	847.00
IUUC-Bra-016664	Brassica rapa	55.44	0.00e+00	847.00
IUUC-Cel-018659	Caenorhabditis elegans	27.95	9.00e-23	102.00
IUUC-Cja-019042	Callithrix jacchus	29.75	3.00e-37	150.00
IUUC-Cfa-020318	Canis familiaris	30.28	1.00e-38	155.00
IUUC-Cpo-021539	Cavia porcellus	30.55	2.00e-38	154.00
IUUC-Csa-024051	Chlorocebus sabaeus	30.55	2.00e-38	154.00
IUUC-Cin-025174	Ciona intestinalis	31.98	8.00e-35	142.00
IUUC-Cne-026878	Cryptococcus neoformans	42.31	3.00e-12	66.60
IUUC-Dno-028892	Dasypus novemcinctus	30.03	1.00e-38	155.00
IUUC-Dor-030268	Dipodomys ordii	30.84	2.00e-38	154.00
IUUC-Ete-033164	Echinops telfairi	27.55	2.00e-30	127.00
IUUC-Eca-033436	Equus caballus	30.03	1.00e-38	154.00
IUUC-Eeu-034801	Erinaceus europaeus	42.65	2.00e-15	77.40
IUUC-Fca-035720	Felis catus	30.28	6.00e-39	155.00
IUUC-Fox-038017	Fusarium oxysporum	42.11	1.00e-11	64.70
IUUC-Fso-038414	Fusarium solani	40.35	6.00e-11	62.00
IUUC-Gmo-039269	Gadus morhua	30.14	9.00e-35	141.00
IUUC-Gac-041303	Gasterosteus aculeatus	29.97	3.00e-35	143.00
IUUC-Gma-042797	Glycine max	63.64	0.00e+00	1060.00
IUUC-Ggo-045426	Gorilla gorilla	29.75	2.00e-38	154.00
IUUC-Hsa-045732	Homo sapiens	30.00	2.00e-38	154.00
IUUC-Hvu-047689	Hordeum vulgare	46.46	0.00e+00	696.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	30.28	2.00e-38	154.00
IUUC-Kpa-049345	Komagataella pastoris	31.96	3.00e-11	63.20
IUUC-Lpe-051253	Leersia perrieri	46.15	0.00e+00	674.00
IUUC-Laf-054267	Loxodonta africana	30.28	1.00e-38	154.00
IUUC-Mcc-055240	Macaca mulatta	30.55	1.00e-38	154.00
IUUC-Mtr-057632	Medicago truncatula	62.00	0.00e+00	1033.00
IUUC-Mla-059072	Melampsora laricipopulina	50.00	2.00e-15	77.40
IUUC-Mmr-061177	Microcebus murinus	29.75	1.00e-38	154.00
IUUC-Mmu-063981	Mus musculus	30.03	1.00e-38	154.00
IUUC-Mac-065103	Musa acuminata	52.66	0.00e+00	861.00
IUUC-Mpu-066498	Mustela putorius furo	30.28	8.00e-39	155.00
IUUC-Mlu-067242	Myotis lucifugus	30.28	1.00e-38	155.00
IUUC-Ncr-068695	Neurospora crassa	36.21	3.00e-11	63.50
IUUC-Nle-069058	Nomascus leucogenys	27.38	3.00e-30	127.00
IUUC-Ont-071299	Oreochromis niloticus	30.23	3.00e-35	143.00
IUUC-Ocu-073799	Oryctolagus cuniculus	30.03	8.00e-39	155.00
IUUC-Oba-075000	Oryza barthii	45.65	0.00e+00	665.00
IUUC-Obr-076532	Oryza brachyantha	47.80	0.00e+00	706.00
IUUC-Ogl-077200	Oryza glaberrima	47.52	0.00e+00	703.00
IUUC-Ogu-078279	Oryza glumaepatula	48.28	8.00e-158	550.00
IUUC-Oin-079097	Oryza indica	47.52	0.00e+00	703.00
IUUC-Olo-080447	Oryza longistaminata	42.74	2.00e-165	575.00
IUUC-Ome-081304	Oryza meridionalis	47.61	0.00e+00	706.00
IUUC-Oni-082162	Oryza nivara	43.56	3.00e-176	611.00
IUUC-Opu-083812	Oryza punctata	46.50	1.00e-175	609.00
IUUC-Oru-084382	Oryza rufipogon	43.56	2.00e-176	612.00
IUUC-Ola-086435	Oryzias latipes	30.51	3.00e-36	146.00
IUUC-Oga-089016	Otolemur garnettii	30.55	1.00e-38	155.00
IUUC-Oar-089589	Ovis aries	30.84	8.00e-39	155.00
IUUC-Ptr-091602	Pan troglodytes	27.38	3.00e-30	127.00
IUUC-Pan-092502	Papio anubis	30.55	2.00e-38	154.00
IUUC-Pab-098619	Pongo abelii	29.75	2.00e-38	154.00
IUUC-Pca-100544	Procavia capensis	30.28	1.00e-38	154.00
IUUC-Ppe-102065	Prunus persica	69.40	0.00e+00	1140.00
IUUC-Pva-102479	Pteropus vampyrus	30.00	2.00e-38	154.00
IUUC-Pgr-103536	Puccinia graminis	47.76	2.00e-16	80.90
IUUC-Rno-105165	Rattus norvegicus	29.75	1.00e-38	155.00
IUUC-Sha-107602	Sarcophilus harrisii	30.26	2.00e-38	154.00
IUUC-Sit-109889	Setaria italica	45.57	0.00e+00	711.00
IUUC-Sly-111490	Solanum lycopersicum	61.16	0.00e+00	971.00
IUUC-Sbi-114734	Sorghum bicolor	45.45	2.00e-60	224.00
IUUC-Sre-115087	Sporisorium reilianum	33.96	1.00e-16	81.30
IUUC-Ssc-116134	Sus scrofa	29.48	1.00e-36	148.00
IUUC-Tru-117867	Takifugu rubripes	29.66	9.00e-35	142.00
IUUC-Tni-120802	Tetraodon nigroviridis	29.39	5.00e-35	142.00
IUUC-Tca-121060	Theobroma cacao	71.59	0.00e+00	1232.00
IUUC-Tre-122150	Trichoderma reesei	37.93	1.00e-09	58.20
IUUC-Tvi-122431	Trichoderma virens	37.93	2.00e-10	60.80
IUUC-Tae-125415	Triticum aestivum	46.77	0.00e+00	717.00
IUUC-Tur-126786	Triticum urartu	42.19	2.00e-169	589.00
IUUC-Ttr-128303	Tursiops truncatus	30.00	7.00e-37	149.00
IUUC-Vda-129815	Verticillium dahliae	25.70	7.00e-11	62.00
IUUC-Vpa-130237	Vicugna pacos	27.00	3.00e-30	127.00
IUUC-Vvi-131316	Vitis vinifera	70.34	0.00e+00	1167.00
IUUC-Xtr-132906	Xenopus tropicalis	28.92	4.00e-36	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence