iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057689

Ensembl Protein ID

KEH31689

UniProt Accession

Q9M7I2; Q9M7I2_MEDTR

Genbank Protein ID

AAF37386.1; KEH31689.1

Protein Name

Cell cycle switch protein CCS52a; WD-repeat cell cycle regulatory protein

Genbank Nucleotide ID

AF134835; CM001220

Gene Name

CCS52; MTR_4g102510

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g102510	KEH31689	KEH31689

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	2.80e-142	474.9	156	457
E3 adaptor/Cullin RING/DCX/DWD	1.90e-26	92.4	290	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvga 101
           p+kvldap l+ddfylnL+dWss+nvlav+Lg++vylw+a++++v+kl+dl  +d v+sv w ++gt+lavGt++g+v+i+D++++kk+r+++gh  rvga
   Q: 156  PYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGVDDCVCSVGWAQRGTHLAVGTNNGKVQIWDAARCKKIRSMEGHRLRVGA 256
           79*************************************************************************************************** PP
   S: 102  LsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGta 202
           L+W + +lssG+rd++i +rd+r++e  +s+l++h++evCGlkw+ d+++LasGGnDn++ vw+++s++P+ k+ eh+aavkaiawsP+ ++lLasGGGta
   Q: 257  LAWSSSLLSSGGRDKNIYQRDIRTQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNKLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTA 357
           ***************************************************************************************************** PP
   S: 203  DrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdkkka 302
           Drci+fwnt+t + l+++dtgsqvc+l+wsk+ +elvsthG+++n+i++w+yp++sk+a+l+gh++Rvl+la+spdg++ivt+agDetlrfw++f + k+
   Q: 358  DRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKS 457
           ***********************************************************************************************87665 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v++l++  +++ l+sG++D+++ vW+
   Q: 290  GHKSEVCGLKWsyDNRELASGGNDNKLFVWN 320
           8**********964499*************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDGTGNRNPP PTSTVGDNSP PPEPSPESLR HVSRMINSNH YTSPSRTIYS DRFIPSRSAS 60
KFALFDINTP TEGRDDSSSA YTTLLRTALF GPDVAGPVTP EKTDSPSMTL PNRNIFRYKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTATATAA GAAGAAGCTT GGGTGGTGCA AGAGTGAGGA AACAGTGTTG TGAAAGAGAA 60
ACAAAGAAAC TCTCTTTCTT TCTCTCTGCA CAATTATCGA GTAGTGTTAT TTTTTTTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

mtr:MTR_4g102510

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000670	Aegilops tauschii	81.29	8.00e-154	536.00
IUUC-Aml-002003	Ailuropoda melanoleuca	56.36	1.00e-134	472.00
IUUC-Atr-002753	Amborella trichopoda	77.45	0.00e+00	654.00
IUUC-Apl-003212	Anas platyrhynchos	56.89	1.00e-137	482.00
IUUC-Aly-006358	Arabidopsis lyrata	79.42	0.00e+00	711.00
IUUC-Ath-006892	Arabidopsis thaliana	78.57	0.00e+00	674.00
IUUC-Ago-007784	Ashbya gossypii	46.17	3.00e-95	342.00
IUUC-Acl-008269	Aspergillus clavatus	49.08	6.00e-128	450.00
IUUC-Afl-008432	Aspergillus flavus	50.10	3.00e-129	454.00
IUUC-Afu-008829	Aspergillus fumigatus	48.11	4.00e-128	451.00
IUUC-Ani-009471	Aspergillus nidulans	48.46	2.00e-128	452.00
IUUC-Ang-009711	Aspergillus niger	49.06	5.00e-127	447.00
IUUC-Aor-010118	Aspergillus oryzae	50.10	3.00e-129	454.00
IUUC-Ate-010534	Aspergillus terreus	48.26	1.00e-127	449.00
IUUC-Ame-011011	Astyanax mexicanus	56.73	1.00e-135	475.00
IUUC-Bgr-012013	Blumeria graminis	46.96	2.00e-121	428.00
IUUC-Bta-012586	Bos taurus	56.89	3.00e-137	481.00
IUUC-Bci-013807	Botrytis cinerea	47.73	3.00e-117	415.00
IUUC-Bdi-014981	Brachypodium distachyon	74.54	0.00e+00	626.00
IUUC-Bol-016301	Brassica oleracea	79.05	0.00e+00	723.00
IUUC-Bra-017453	Brassica rapa	79.05	0.00e+00	724.00
IUUC-Cel-018472	Caenorhabditis elegans	57.46	1.00e-115	410.00
IUUC-Cja-019929	Callithrix jacchus	56.92	9.00e-137	479.00
IUUC-Cfa-020977	Canis familiaris	57.21	9.00e-137	479.00
IUUC-Cpo-021537	Cavia porcellus	56.89	4.00e-137	480.00
IUUC-Csa-023389	Chlorocebus sabaeus	56.62	1.00e-137	482.00
IUUC-Cin-025327	Ciona intestinalis	55.76	2.00e-131	461.00
IUUC-Csv-025921	Ciona savignyi	53.29	2.00e-129	454.00
IUUC-Cgl-026631	Colletotrichum gloeosporioides	46.92	2.00e-121	428.00
IUUC-Cme-027143	Cyanidioschyzon merolae	63.93	5.00e-118	418.00
IUUC-Dre-027470	Danio rerio	55.73	2.00e-133	468.00
IUUC-Dno-029629	Dasypus novemcinctus	61.72	2.00e-116	412.00
IUUC-Dor-030187	Dipodomys ordii	58.79	2.00e-127	448.00
IUUC-Dse-031502	Dothistroma septosporum	46.22	6.00e-115	407.00
IUUC-Dme-031858	Drosophila melanogaster	54.76	9.00e-135	473.00
IUUC-Eca-034210	Equus caballus	56.89	4.00e-137	480.00
IUUC-Fca-035839	Felis catus	60.40	5.00e-134	470.00
IUUC-Fal-036895	Ficedula albicollis	56.89	1.00e-137	482.00
IUUC-Fox-037814	Fusarium oxysporum	65.05	2.00e-119	421.00
IUUC-Fso-038420	Fusarium solani	60.22	3.00e-122	431.00
IUUC-Gmo-039544	Gadus morhua	54.61	1.00e-132	466.00
IUUC-Ggr-039774	Gaeumannomyces graminis	60.34	2.00e-121	428.00
IUUC-Gga-041025	Gallus gallus	57.11	3.00e-138	484.00
IUUC-Gac-041279	Gasterosteus aculeatus	55.87	3.00e-136	478.00
IUUC-Gma-042657	Glycine max	89.45	0.00e+00	857.00
IUUC-Ggo-045599	Gorilla gorilla	56.67	2.00e-135	474.00
IUUC-Hsa-046695	Homo sapiens	56.92	6.00e-137	479.00
IUUC-Itr-048192	Ictidomys tridecemlineatus	56.40	8.00e-137	479.00
IUUC-Kpa-049239	Komagataella pastoris	54.29	6.00e-114	404.00
IUUC-Lch-049827	Latimeria chalumnae	56.43	3.00e-136	478.00
IUUC-Loc-052856	Lepisosteus oculatus	56.36	2.00e-135	475.00
IUUC-Mcc-055601	Macaca mulatta	56.62	1.00e-137	482.00
IUUC-Meu-056276	Macropus eugenii	52.51	2.00e-117	415.00
IUUC-Mor-057113	Magnaporthe oryzae	48.12	3.00e-121	428.00
IUUC-Mpo-057599	Magnaporthe poae	60.34	1.00e-121	429.00
IUUC-Mla-059048	Melampsora laricipopulina	45.85	4.00e-103	368.00
IUUC-Mga-060097	Meleagris gallopavo	54.23	2.00e-126	445.00
IUUC-Mvi-060465	Microbotryum violaceum	48.95	1.00e-121	429.00
IUUC-Mmr-061151	Microcebus murinus	50.44	3.00e-110	391.00
IUUC-Mdo-063062	Monodelphis domestica	56.89	2.00e-137	482.00
IUUC-Mmu-063731	Mus musculus	56.67	7.00e-137	479.00
IUUC-Mac-065208	Musa acuminata	79.42	0.00e+00	675.00
IUUC-Mpu-066173	Mustela putorius furo	56.89	3.00e-137	481.00
IUUC-Mlu-068030	Myotis lucifugus	57.21	1.00e-136	479.00
IUUC-Nfi-068536	Neosartorya fischeri	48.11	9.00e-128	449.00
IUUC-Ncr-068734	Neurospora crassa	62.95	1.00e-122	432.00
IUUC-Nle-070163	Nomascus leucogenys	56.62	2.00e-137	482.00
IUUC-Opr-070974	Ochotona princeps	65.74	6.00e-104	369.00
IUUC-Ont-072507	Oreochromis niloticus	54.94	1.00e-135	475.00
IUUC-Oan-073634	Ornithorhynchus anatinus	69.34	3.00e-114	403.00
IUUC-Obr-076123	Oryza brachyantha	80.27	4.00e-169	587.00
IUUC-Ogl-077294	Oryza glaberrima	69.89	5.00e-178	616.00
IUUC-Ogu-077996	Oryza glumaepatula	69.89	7.00e-177	612.00
IUUC-Oin-080172	Oryza indica	80.65	6.00e-171	592.00
IUUC-Olo-081068	Oryza longistaminata	80.44	3.00e-168	583.00
IUUC-Ome-081250	Oryza meridionalis	70.41	3.00e-178	617.00
IUUC-Oni-083048	Oryza nivara	69.89	5.00e-178	616.00
IUUC-Opu-083333	Oryza punctata	70.04	6.00e-178	616.00
IUUC-Oru-085001	Oryza rufipogon	69.89	5.00e-178	616.00
IUUC-Osa-086243	Oryza sativa	69.89	5.00e-178	616.00
IUUC-Ola-087094	Oryzias latipes	54.91	3.00e-129	454.00
IUUC-Olu-087864	Ostreococcus lucimarinus	76.09	3.00e-99	353.00
IUUC-Oga-088911	Otolemur garnettii	56.89	3.00e-137	481.00
IUUC-Oar-089508	Ovis aries	56.89	3.00e-137	481.00
IUUC-Pan-092147	Papio anubis	56.92	6.00e-137	479.00
IUUC-Psi-093702	Pelodiscus sinensis	56.89	1.00e-138	485.00
IUUC-Pma-094581	Petromyzon marinus	53.23	1.00e-125	442.00
IUUC-Pno-095139	Phaeosphaeria nodorum	60.62	1.00e-114	406.00
IUUC-Ppa-095366	Physcomitrella patens	69.76	2.00e-180	624.00
IUUC-Pfo-096309	Poecilia formosa	55.48	1.00e-133	469.00
IUUC-Pop-098924	Populus trichocarpa	83.15	0.00e+00	741.00
IUUC-Pca-100565	Procavia capensis	55.90	3.00e-132	464.00
IUUC-Ppe-101924	Prunus persica	88.89	0.00e+00	807.00
IUUC-Pva-102602	Pteropus vampyrus	56.02	5.00e-133	467.00
IUUC-Pgr-103466	Puccinia graminis	46.37	2.00e-103	369.00
IUUC-Pte-104097	Pyrenophora teres	47.70	2.00e-124	438.00
IUUC-Pyt-104445	Pyrenophora triticirepentis	43.30	3.00e-104	371.00
IUUC-Rno-105028	Rattus norvegicus	56.67	5.00e-137	480.00
IUUC-Sce-106240	Saccharomyces cerevisiae	48.06	1.00e-91	329.00
IUUC-Sha-106538	Sarcophilus harrisii	50.34	3.00e-117	414.00
IUUC-Sja-107785	Schizosaccharomyces japonicus	46.14	3.00e-113	401.00
IUUC-Spo-108369	Schizosaccharomyces pombe	46.25	3.00e-108	385.00
IUUC-Ssl-108391	Sclerotinia sclerotiorum	47.14	5.00e-119	421.00
IUUC-Smo-108878	Selaginella moellendorffii	71.80	0.00e+00	639.00
IUUC-Sit-110563	Setaria italica	73.25	3.00e-175	607.00
IUUC-Sly-111446	Solanum lycopersicum	82.10	0.00e+00	730.00
IUUC-Stu-112491	Solanum tuberosum	82.33	0.00e+00	731.00
IUUC-Sbi-114489	Sorghum bicolor	73.68	5.00e-178	616.00
IUUC-Ssc-116171	Sus scrofa	56.89	3.00e-137	481.00
IUUC-Tgu-116878	Taeniopygia guttata	50.11	5.00e-113	400.00
IUUC-Tru-118222	Takifugu rubripes	55.38	1.00e-132	465.00
IUUC-Tni-119863	Tetraodon nigroviridis	55.65	3.00e-133	467.00
IUUC-Tca-121599	Theobroma cacao	85.78	0.00e+00	766.00
IUUC-Tre-122249	Trichoderma reesei	47.78	8.00e-122	430.00
IUUC-Tvi-122675	Trichoderma virens	59.03	3.00e-121	427.00
IUUC-Tae-123489	Triticum aestivum	72.89	2.00e-179	621.00
IUUC-Tme-127151	Tuber melanosporum	52.78	3.00e-137	481.00
IUUC-Tbe-128056	Tupaia belangeri	60.46	3.00e-98	350.00
IUUC-Ttr-129055	Tursiops truncatus	57.24	3.00e-137	481.00
IUUC-Vda-130027	Verticillium dahliae	48.31	2.00e-122	432.00
IUUC-Vvi-131749	Vitis vinifera	84.29	0.00e+00	769.00
IUUC-Xtr-132808	Xenopus tropicalis	56.19	1.00e-136	479.00
IUUC-Xma-133183	Xiphophorus maculatus	55.48	1.00e-133	469.00
IUUC-Yli-134584	Yarrowia lipolytica	63.22	1.00e-121	429.00
IUUC-Zma-135717	Zea mays	72.57	2.00e-175	607.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence