iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d032763	Zm00001d032763_T005	Zm00001d032763_T005
Zm00001d032763	Zm00001d032763_T008	Zm00001d032763_T008
Zm00001d032763	Zm00001d032763_T006	Zm00001d032763_T006
Zm00001d032763	Zm00001d032763_T009	Zm00001d032763_T009
Zm00001d032763	Zm00001d032763_T001	Zm00001d032763_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-26	92.1	261	291
E3 activity/RING/U-box	3.90e-14	54.5	1	68
UBD/Beta-Prp	1.10e-51	177.8	219	431

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ ++t l+f   d l+v+Gs D+t+++W 
   Q: 261  GHSKKITTLKFvpRDQLFVTGSADKTVRIWQ 291
           8***********877***************5 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++C+Is+e++ +Pvv++ sG  ++r+ Ie+++++ gk cP+t+ +lt +d+vP +t + +  + +++ s
   Q: 1    MICAISGEVPDEPVVSKkSGLLFERRLIERYIEDHGK-CPITKDELTMDDIVPVNTNKVVKPRPLQAAS 68
           58**********************************9.*******************999998887765 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvw...dletgqcleetlsgh 136
            +++++ +++ +p++++ +tg+ D ++ ++d s+g+++ tl+gh++++++l+f p ++ +v+Gs+d+t+r+w   +  ++ c++ tl+ h
   Q: 219  TNKPGILSMDVHPSKDVVATGGIDTNAVIFDRSSGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWqenENGNYNCVH-TLKDH 307
           445555555555555555555555555555555555555555555555555555555555555555555555222223344555.55555 PP
   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
           ++ v  v+vh +++++vs+s+D+   ++d++tg++l++  +   ++  +s sf+++g  l +g +d  vk+wd++t++ v +++gh  +v
   Q: 308  TAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVgEASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPV 397
           555555555555555555555555555555555555555422223334445555555555555555555555555555555555555555 PP
   S: 226  ksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           + + fs+n+ +l+++++Dg +++Wdlr+  + +t+
   Q: 398  TAMSFSENGYFLATAAHDG-VKLWDLRKLRNFRTF 431
           5555555555555554333.455555555544444 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MICAISGEVP DEPVVSKKSG LLFERRLIER YIEDHGKCPI TKDELTMDDI VPVNTNKVVK 60
PRPLQAASIP GLLGIFQNEW DALMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACCCTAG CGGCAAAACC TTCGCTCTGC GCCGCCGTCG CCTGCTCCCG TCCCGCCACC 60
ACATCCGCCC AGGAGCTCGC CGTCGGGGAG GCTGCTCGAG GAGCCGCGCT GTCTCTCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

zma:100284255

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	78.96	0.00e+00	859.00
IUUC-Aml-001230	Ailuropoda melanoleuca	44.53	1.00e-110	393.00
IUUC-Atr-002594	Amborella trichopoda	74.81	0.00e+00	812.00
IUUC-Apl-003686	Anas platyrhynchos	43.16	1.00e-86	312.00
IUUC-Aca-005272	Anolis carolinensis	44.62	9.00e-117	413.00
IUUC-Aly-005586	Arabidopsis lyrata	72.03	0.00e+00	781.00
IUUC-Ath-007696	Arabidopsis thaliana	71.24	0.00e+00	766.00
IUUC-Ago-007879	Ashbya gossypii	46.90	1.00e-28	120.00
IUUC-Acl-008335	Aspergillus clavatus	33.54	1.00e-62	233.00
IUUC-Afl-008527	Aspergillus flavus	35.14	3.00e-69	255.00
IUUC-Afu-008957	Aspergillus fumigatus	33.60	3.00e-72	265.00
IUUC-Ani-009280	Aspergillus nidulans	34.04	1.00e-62	233.00
IUUC-Ang-009746	Aspergillus niger	34.52	2.00e-68	252.00
IUUC-Aor-009905	Aspergillus oryzae	34.94	3.00e-71	261.00
IUUC-Ate-010412	Aspergillus terreus	35.92	5.00e-64	238.00
IUUC-Ame-011561	Astyanax mexicanus	42.25	9.00e-42	163.00
IUUC-Bgr-012283	Blumeria graminis	30.30	7.00e-50	191.00
IUUC-Bta-013242	Bos taurus	45.00	3.00e-117	414.00
IUUC-Bci-013901	Botrytis cinerea	32.56	3.00e-66	245.00
IUUC-Bdi-014277	Brachypodium distachyon	90.38	0.00e+00	976.00
IUUC-Bol-016207	Brassica oleracea	70.02	0.00e+00	769.00
IUUC-Bra-017650	Brassica rapa	70.21	0.00e+00	764.00
IUUC-Cel-018271	Caenorhabditis elegans	39.38	3.00e-104	371.00
IUUC-Cja-019879	Callithrix jacchus	45.11	7.00e-116	410.00
IUUC-Cfa-020175	Canis familiaris	45.07	3.00e-117	414.00
IUUC-Cpo-022379	Cavia porcellus	44.81	6.00e-117	414.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	47.78	1.00e-131	462.00
IUUC-Csa-023500	Chlorocebus sabaeus	45.00	7.00e-117	413.00
IUUC-Cho-025065	Choloepus hoffmanni	36.48	9.00e-42	163.00
IUUC-Cin-025699	Ciona intestinalis	46.12	1.00e-102	366.00
IUUC-Csv-026128	Ciona savignyi	43.70	7.00e-115	407.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.43	1.00e-65	243.00
IUUC-Cne-026860	Cryptococcus neoformans	37.52	8.00e-93	333.00
IUUC-Dre-028187	Danio rerio	44.87	8.00e-117	413.00
IUUC-Dno-029453	Dasypus novemcinctus	45.00	7.00e-117	413.00
IUUC-Dor-030150	Dipodomys ordii	43.37	1.00e-40	160.00
IUUC-Dse-031220	Dothistroma septosporum	33.59	9.00e-67	247.00
IUUC-Dme-031906	Drosophila melanogaster	43.79	4.00e-109	387.00
IUUC-Ete-033035	Echinops telfairi	45.15	2.00e-56	212.00
IUUC-Eca-033478	Equus caballus	45.00	5.00e-117	414.00
IUUC-Eeu-034974	Erinaceus europaeus	46.11	3.00e-80	292.00
IUUC-Fca-036194	Felis catus	44.49	4.00e-115	407.00
IUUC-Fal-037417	Ficedula albicollis	44.81	1.00e-117	416.00
IUUC-Fox-037922	Fusarium oxysporum	33.33	1.00e-69	256.00
IUUC-Fso-038256	Fusarium solani	32.88	2.00e-72	266.00
IUUC-Gmo-038713	Gadus morhua	44.49	7.00e-118	416.00
IUUC-Ggr-039854	Gaeumannomyces graminis	33.52	1.00e-60	226.00
IUUC-Gga-041143	Gallus gallus	45.07	9.00e-118	416.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.87	3.00e-118	418.00
IUUC-Gma-043635	Glycine max	75.43	0.00e+00	832.00
IUUC-Ggo-045262	Gorilla gorilla	45.00	7.00e-117	413.00
IUUC-Hsa-046036	Homo sapiens	45.00	7.00e-117	413.00
IUUC-Hvu-047442	Hordeum vulgare	90.68	6.00e-166	575.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	45.07	2.00e-117	415.00
IUUC-Lch-050105	Latimeria chalumnae	44.68	2.00e-113	402.00
IUUC-Lpe-050976	Leersia perrieri	90.49	0.00e+00	985.00
IUUC-Loc-052042	Lepisosteus oculatus	39.63	5.00e-81	294.00
IUUC-Lma-053143	Leptosphaeria maculans	32.42	3.00e-64	239.00
IUUC-Laf-053451	Loxodonta africana	43.39	2.00e-113	402.00
IUUC-Mcc-055786	Macaca mulatta	45.00	7.00e-117	413.00
IUUC-Meu-056161	Macropus eugenii	44.83	2.00e-53	202.00
IUUC-Mor-057215	Magnaporthe oryzae	33.08	2.00e-62	233.00
IUUC-Mpo-057419	Magnaporthe poae	33.27	6.00e-58	218.00
IUUC-Mtr-057756	Medicago truncatula	73.59	0.00e+00	798.00
IUUC-Mla-059085	Melampsora laricipopulina	36.82	4.00e-82	298.00
IUUC-Mga-060158	Meleagris gallopavo	43.66	8.00e-102	363.00
IUUC-Mvi-060441	Microbotryum violaceum	34.85	1.00e-73	270.00
IUUC-Mmr-061085	Microcebus murinus	45.00	7.00e-117	413.00
IUUC-Mdo-061804	Monodelphis domestica	45.00	6.00e-117	414.00
IUUC-Mmu-063608	Mus musculus	43.23	3.00e-113	401.00
IUUC-Mac-064754	Musa acuminata	81.15	0.00e+00	858.00
IUUC-Mpu-065700	Mustela putorius furo	45.07	3.00e-117	414.00
IUUC-Mlu-068223	Myotis lucifugus	44.17	2.00e-114	405.00
IUUC-Nfi-068504	Neosartorya fischeri	34.10	1.00e-70	259.00
IUUC-Ncr-068729	Neurospora crassa	31.01	3.00e-58	218.00
IUUC-Nle-069754	Nomascus leucogenys	45.00	7.00e-117	413.00
IUUC-Opr-070621	Ochotona princeps	46.02	1.00e-107	383.00
IUUC-Ont-071377	Oreochromis niloticus	45.07	1.00e-117	416.00
IUUC-Oan-073498	Ornithorhynchus anatinus	32.43	2.00e-35	142.00
IUUC-Ocu-074182	Oryctolagus cuniculus	43.25	3.00e-113	401.00
IUUC-Oba-075509	Oryza barthii	90.61	0.00e+00	980.00
IUUC-Obr-076480	Oryza brachyantha	90.89	0.00e+00	990.00
IUUC-Ogl-077052	Oryza glaberrima	89.94	0.00e+00	981.00
IUUC-Ogu-078919	Oryza glumaepatula	89.75	0.00e+00	980.00
IUUC-Oin-079357	Oryza indica	86.34	0.00e+00	923.00
IUUC-Olo-080376	Oryza longistaminata	88.89	0.00e+00	914.00
IUUC-Ome-081973	Oryza meridionalis	90.00	0.00e+00	915.00
IUUC-Oni-082849	Oryza nivara	89.94	0.00e+00	984.00
IUUC-Opu-083243	Oryza punctata	90.32	0.00e+00	984.00
IUUC-Oru-084613	Oryza rufipogon	89.75	0.00e+00	981.00
IUUC-Osa-085407	Oryza sativa	89.75	0.00e+00	979.00
IUUC-Ola-086566	Oryzias latipes	44.62	3.00e-117	414.00
IUUC-Olu-087757	Ostreococcus lucimarinus	43.05	7.00e-114	403.00
IUUC-Oga-089010	Otolemur garnettii	43.43	1.00e-109	389.00
IUUC-Oar-089638	Ovis aries	45.00	3.00e-117	414.00
IUUC-Ptr-091141	Pan troglodytes	45.00	7.00e-117	413.00
IUUC-Pan-092662	Papio anubis	45.00	7.00e-117	413.00
IUUC-Psi-093777	Pelodiscus sinensis	44.93	7.00e-92	330.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.79	1.00e-66	246.00
IUUC-Ppa-095924	Physcomitrella patens	70.02	0.00e+00	762.00
IUUC-Pfo-096390	Poecilia formosa	45.26	6.00e-119	420.00
IUUC-Pab-098250	Pongo abelii	45.12	4.00e-111	394.00
IUUC-Pop-099854	Populus trichocarpa	74.62	0.00e+00	828.00
IUUC-Pca-100553	Procavia capensis	45.00	1.00e-114	406.00
IUUC-Ppe-101383	Prunus persica	73.37	0.00e+00	798.00
IUUC-Pva-102189	Pteropus vampyrus	45.00	3.00e-117	414.00
IUUC-Pgr-103304	Puccinia graminis	35.25	1.00e-79	289.00
IUUC-Ptt-103984	Puccinia triticina	34.88	4.00e-80	291.00
IUUC-Pte-104385	Pyrenophora teres	31.79	7.00e-64	237.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	32.00	2.00e-62	233.00
IUUC-Rno-105581	Rattus norvegicus	44.81	7.00e-117	413.00
IUUC-Sce-106147	Saccharomyces cerevisiae	40.56	2.00e-24	106.00
IUUC-Sha-107071	Sarcophilus harrisii	42.99	8.00e-113	400.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	30.38	4.00e-46	178.00
IUUC-Spo-108315	Schizosaccharomyces pombe	31.05	2.00e-43	169.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	31.72	1.00e-63	236.00
IUUC-Smo-109648	Selaginella moellendorffii	65.50	0.00e+00	723.00
IUUC-Sit-109873	Setaria italica	95.82	0.00e+00	1031.00
IUUC-Sly-111673	Solanum lycopersicum	75.43	0.00e+00	819.00
IUUC-Stu-112125	Solanum tuberosum	75.96	0.00e+00	819.00
IUUC-Sbi-114696	Sorghum bicolor	89.41	0.00e+00	921.00
IUUC-Sre-115134	Sporisorium reilianum	32.97	2.00e-78	285.00
IUUC-Ssc-116260	Sus scrofa	45.00	3.00e-117	414.00
IUUC-Tgu-116533	Taeniopygia guttata	45.07	3.00e-117	414.00
IUUC-Tru-117800	Takifugu rubripes	43.76	3.00e-116	411.00
IUUC-Tsy-118980	Tarsius syrichta	43.17	1.00e-101	362.00
IUUC-Tni-120334	Tetraodon nigroviridis	44.31	2.00e-80	292.00
IUUC-Tca-121807	Theobroma cacao	74.00	0.00e+00	819.00
IUUC-Tre-121920	Trichoderma reesei	33.05	5.00e-63	234.00
IUUC-Tvi-122294	Trichoderma virens	32.11	2.00e-54	206.00
IUUC-Tae-125713	Triticum aestivum	91.73	0.00e+00	989.00
IUUC-Tur-126664	Triticum urartu	81.75	0.00e+00	938.00
IUUC-Tme-127026	Tuber melanosporum	35.29	2.00e-74	272.00
IUUC-Tbe-127582	Tupaia belangeri	45.72	3.00e-80	291.00
IUUC-Ttr-128313	Tursiops truncatus	45.19	5.00e-116	410.00
IUUC-Uma-129626	Ustilago maydis	34.81	1.00e-78	286.00
IUUC-Vda-129699	Verticillium dahliae	32.25	4.00e-62	231.00
IUUC-Vpa-130593	Vicugna pacos	46.02	1.00e-107	382.00
IUUC-Vvi-131668	Vitis vinifera	77.29	0.00e+00	859.00
IUUC-Xtr-132186	Xenopus tropicalis	46.58	2.00e-100	358.00
IUUC-Xma-133212	Xiphophorus maculatus	45.56	6.00e-118	417.00
IUUC-Yli-134607	Yarrowia lipolytica	57.25	3.00e-40	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence