iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	miRNAMap	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	81.52	2.00e-39	156.00	IUUC-Dme-031722
E3 activity/RING/RING	96.46	3.00e-50	194.00	IUUC-Hsa-045901

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MADVEDGEEP CVLSSHSGSA GSKSGGDKMF SLKKWNAVAM WSWDVECDTC AICRVQVMDA 60
CLRCQAENKQ EDCVVVWGEC NHSFHNCCMS LWVKQNNRCP LCQQDWVVQR IGK 113

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTCCGCGC CCAACGTCCG CGTAGCCGTT CTGCGCCGCC GCCATGGCCG ACGTGGAGGA 60
CGGCGAGGAA CCCTGCGTCC TTTCCTCGCA TTCTGGGAGC GCAGGCTCCA AGTCGGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

Gene Ontology

GO:0031466--C:Cul5-RING ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0019788--F:NEDD8 transferase activity
GO:0008270--F:zinc ion binding
GO:0045116--P:protein neddylation

KEGG

rno:300948

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001959	Ailuropoda melanoleuca	99.08	5.00e-50	188.00
IUUC-Apl-003554	Anas platyrhynchos	96.49	2.00e-28	116.00
IUUC-Aca-004651	Anolis carolinensis	82.76	6.00e-49	185.00
IUUC-Ame-010935	Astyanax mexicanus	84.87	1.00e-47	181.00
IUUC-Bta-013315	Bos taurus	99.12	3.00e-52	196.00
IUUC-Cel-018286	Caenorhabditis elegans	68.97	2.00e-33	134.00
IUUC-Cja-019230	Callithrix jacchus	98.23	2.00e-51	193.00
IUUC-Cfa-020188	Canis familiaris	98.23	7.00e-52	194.00
IUUC-Cpo-021681	Cavia porcellus	97.35	3.00e-52	196.00
IUUC-Csa-023305	Chlorocebus sabaeus	96.46	1.00e-51	194.00
IUUC-Cho-024539	Choloepus hoffmanni	96.46	2.00e-49	187.00
IUUC-Cin-025216	Ciona intestinalis	82.56	4.00e-40	155.00
IUUC-Csv-026356	Ciona savignyi	85.53	2.00e-36	142.00
IUUC-Dre-027952	Danio rerio	92.04	6.00e-49	185.00
IUUC-Dno-029920	Dasypus novemcinctus	97.35	2.00e-50	190.00
IUUC-Dme-031722	Drosophila melanogaster	81.52	2.00e-40	156.00
IUUC-Ete-033111	Echinops telfairi	76.11	1.00e-37	147.00
IUUC-Eca-034329	Equus caballus	96.51	2.00e-44	169.00
IUUC-Fal-037052	Ficedula albicollis	97.75	2.00e-47	179.00
IUUC-Gmo-038573	Gadus morhua	90.18	3.00e-49	186.00
IUUC-Gga-040409	Gallus gallus	87.72	3.00e-50	189.00
IUUC-Gac-041808	Gasterosteus aculeatus	89.29	3.00e-49	186.00
IUUC-Ggo-045314	Gorilla gorilla	96.46	1.00e-51	194.00
IUUC-Hsa-045901	Homo sapiens	96.46	1.00e-51	194.00
IUUC-Itr-048540	Ictidomys tridecemlineatus	97.35	1.00e-51	194.00
IUUC-Lch-049958	Latimeria chalumnae	89.38	5.00e-48	182.00
IUUC-Loc-052481	Lepisosteus oculatus	90.27	3.00e-49	186.00
IUUC-Laf-054260	Loxodonta africana	97.35	4.00e-49	186.00
IUUC-Mcc-055092	Macaca mulatta	82.30	1.00e-39	153.00
IUUC-Meu-056081	Macropus eugenii	89.19	3.00e-28	115.00
IUUC-Mga-059532	Meleagris gallopavo	91.80	1.00e-28	117.00
IUUC-Mmr-061775	Microcebus murinus	84.07	2.00e-39	152.00
IUUC-Mdo-062083	Monodelphis domestica	92.92	2.00e-50	190.00
IUUC-Mmu-063421	Mus musculus	100.00	1.00e-52	197.00
IUUC-Mpu-066010	Mustela putorius furo	99.12	3.00e-52	196.00
IUUC-Mlu-067975	Myotis lucifugus	96.49	2.00e-28	116.00
IUUC-Nle-069723	Nomascus leucogenys	96.46	1.00e-51	194.00
IUUC-Opr-070339	Ochotona princeps	97.35	2.00e-52	196.00
IUUC-Ont-072072	Oreochromis niloticus	90.18	2.00e-50	190.00
IUUC-Oan-073574	Ornithorhynchus anatinus	85.96	1.00e-46	177.00
IUUC-Ola-087260	Oryzias latipes	87.50	2.00e-49	186.00
IUUC-Oga-089038	Otolemur garnettii	96.46	2.00e-51	193.00
IUUC-Oar-089945	Ovis aries	99.12	3.00e-52	196.00
IUUC-Ptr-091040	Pan troglodytes	96.46	1.00e-51	194.00
IUUC-Pan-092693	Papio anubis	96.46	1.00e-51	194.00
IUUC-Psi-093633	Pelodiscus sinensis	100.00	4.00e-47	179.00
IUUC-Pfo-096440	Poecilia formosa	91.07	5.00e-49	185.00
IUUC-Pab-098277	Pongo abelii	96.46	1.00e-51	194.00
IUUC-Pva-102548	Pteropus vampyrus	99.12	3.00e-52	196.00
IUUC-Sha-107430	Sarcophilus harrisii	94.69	2.00e-50	190.00
IUUC-Sar-112957	Sorex araneus	84.96	2.00e-46	176.00
IUUC-Ssc-115606	Sus scrofa	86.15	1.00e-18	84.30
IUUC-Tgu-116519	Taeniopygia guttata	90.32	6.00e-29	118.00
IUUC-Tru-117658	Takifugu rubripes	85.96	3.00e-48	183.00
IUUC-Tsy-119251	Tarsius syrichta	97.35	2.00e-51	193.00
IUUC-Tni-120364	Tetraodon nigroviridis	88.50	2.00e-48	183.00
IUUC-Tbe-127256	Tupaia belangeri	85.84	3.00e-39	152.00
IUUC-Ttr-129140	Tursiops truncatus	99.12	3.00e-52	196.00
IUUC-Vpa-130670	Vicugna pacos	96.55	8.00e-44	167.00
IUUC-Xtr-132382	Xenopus tropicalis	100.00	3.00e-46	175.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence