iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000910	EOX91844	EOX91844
TCM_000910	EOX91845	EOX91845
TCM_000910	EOX91846	EOX91846
TCM_000910	EOX91847	EOX91847

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.70e-16	60.0	257	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllaskksl 76
           +++kvs++g+++++++dl+ + ++++L +a+++ +                           l +se+ l+YeD+dGD++ l++D++++++++       +
   Q: 257  LFIKVSMDGAPYLRKVDLRTYSTYRELSSALEKmFScftlgqcgshgspgkeilsesklkdLLHGSEYVLTYEDKDGDWM-LVGDVPWEMFIE------TC 350
           58*******************************722566999******************99999***************.************......89 PP
   S: 77   lrlliqk 83
           +rl i+k
   Q: 351  KRLKIMK 357
           9999886 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSQPLLGVEE EGQSNVSSPS DDCISQNGLG LKERNYLGLS DCSSVDSSGV SSLTEDNKNN 60
LNLKATELRL GLPGSQSPER EPELCLLNSG KLDEKPLFPL LPSKDGICSS SQKTVVSGNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCTTTCT GCTTAATGGA AGGACCTTGA GGAGTTTGTT TTCTCTCTCT CTCTCTTTAT 60
TTCTTTCTCT GCTTTTATTT CCTCTGCAGT TCGTGCATTT TCACCTGCAA TTTTTGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

tcc:TCM_000910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002534	Amborella trichopoda	59.72	4.00e-110	390.00
IUUC-Aly-005481	Arabidopsis lyrata	65.54	1.00e-118	418.00
IUUC-Ath-007607	Arabidopsis thaliana	65.54	3.00e-118	417.00
IUUC-Bta-012950	Bos taurus	32.14	2.90e-02	32.30
IUUC-Bol-015732	Brassica oleracea	60.54	1.00e-109	388.00
IUUC-Bra-017890	Brassica rapa	51.98	2.00e-81	295.00
IUUC-Cja-019530	Callithrix jacchus	32.14	2.50e-02	32.30
IUUC-Cfa-020019	Canis familiaris	32.14	3.90e-02	32.00
IUUC-Cpo-021749	Cavia porcellus	32.14	3.00e-02	32.30
IUUC-Csa-023127	Chlorocebus sabaeus	32.14	2.40e-02	32.00
IUUC-Dre-028554	Danio rerio	37.10	8.00e-01	27.70
IUUC-Dno-029244	Dasypus novemcinctus	32.14	3.10e-02	32.30
IUUC-Dor-030191	Dipodomys ordii	32.14	3.50e-02	32.00
IUUC-Eca-033719	Equus caballus	32.14	3.50e-02	32.00
IUUC-Eeu-035270	Erinaceus europaeus	32.14	1.30e-02	33.50
IUUC-Fca-035804	Felis catus	32.14	3.40e-02	32.00
IUUC-Gmo-039664	Gadus morhua	34.48	1.40e-02	34.70
IUUC-Gma-044179	Glycine max	69.90	1.00e-139	488.00
IUUC-Hsa-045687	Homo sapiens	32.14	2.80e-02	32.30
IUUC-Itr-048521	Ictidomys tridecemlineatus	32.14	2.90e-02	32.30
IUUC-Laf-053735	Loxodonta africana	32.14	3.50e-02	32.00
IUUC-Mcc-054955	Macaca mulatta	32.14	2.80e-02	32.30
IUUC-Mtr-058323	Medicago truncatula	68.56	1.00e-127	448.00
IUUC-Mmr-061160	Microcebus murinus	32.14	2.60e-02	32.30
IUUC-Mdo-062388	Monodelphis domestica	32.14	2.50e-02	32.30
IUUC-Mmu-063730	Mus musculus	32.14	2.90e-02	32.30
IUUC-Mpu-065683	Mustela putorius furo	32.14	3.40e-02	32.00
IUUC-Mlu-067270	Myotis lucifugus	32.14	1.10e-02	33.50
IUUC-Nle-069491	Nomascus leucogenys	32.14	3.00e-02	32.30
IUUC-Opr-071160	Ochotona princeps	32.14	2.90e-02	32.30
IUUC-Oan-073255	Ornithorhynchus anatinus	32.14	2.90e-02	32.30
IUUC-Oga-088931	Otolemur garnettii	32.14	2.40e-02	32.30
IUUC-Oar-090035	Ovis aries	32.14	2.80e-02	32.30
IUUC-Ptr-091043	Pan troglodytes	32.14	2.80e-02	32.30
IUUC-Pab-098182	Pongo abelii	32.14	3.10e-02	32.00
IUUC-Ppe-101672	Prunus persica	78.16	8.00e-156	542.00
IUUC-Rno-105324	Rattus norvegicus	32.14	3.10e-02	32.00
IUUC-Sha-106837	Sarcophilus harrisii	32.14	2.50e-02	32.30
IUUC-Tsy-119108	Tarsius syrichta	32.14	2.80e-02	32.30
IUUC-Tbe-127251	Tupaia belangeri	32.14	3.40e-02	32.00
IUUC-Ttr-129157	Tursiops truncatus	32.14	3.40e-02	32.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence