iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074273

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02050270

Gene Name

HERC2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000006754.3	ENSOCUT00000006773.3	ENSOCUP00000005856.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/HECT	4.70e-84	282.7	4476	4806

Active Site

Position(s)	Description	Evidence
4775	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 activity/HECT

   S: 7    krlevefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknp.....ehlklFefl.Grllgkalqdgrl 87
           ++++v+fvgE++ d+gG  +e +a++++elqn  ++l+  ++n++ +   n+d +l np      h ++F+fl G+llg+a+++g +
   Q: 4476 RVWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFNPaarapVHSSMFRFLaGVLLGIAIRTGSP 4562
           4566***********************************************************9*******966************* PP
   S: 88   ldlplsksfyklllgkklsledleevdpelykslkeikenaesdieelgldltfsvseeilgetkeeeLkpgGenipVtneNkeeYv 174
           l l+l+++++k+l g +l++ dl+evd++++  l++i++n+ ++ e +++ l f+     +++++ +++  +++ +++t +N+ eYv
   Q: 4563 LSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRDNEATSEEFEAMSLPFT-----VPSASGQDIQLSSKYTHITLDNRAEYV 4644
           ****************************************9999999999***99.....788999999****************** PP
   S: 175  klvveyrlkegikeqveafreGfneviplellslFteeelellicGeeeidvedlkketkykggytedspaiqwFwevleefsseer 261
           +l ++yrl+e ++eqv+a+reG+ +v+p  llslFt  ele+++cG+++i ++ lk+ ++ykg ++++ + iqwFwev+e+fs++er
   Q: 4645 RLAINYRLHE-FDEQVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKG-IEPSASLIQWFWEVMESFSNTER 4729
           **********.**************************************************77.*********************** PP
   S: 262  kafLqFvTgssrlPlgGfaelkprlfvirk....dasddrlPssnTCfnyLkLPeYsskeilkekLlyAieetkgFel 335
           + fL+Fv+g+ rlP + +a+++ r fvi+     +  d+ lP+s TCf++LkLP+Ys k++l+ekL yAi+ +k++++
   Q: 4730 SLFLRFVWGRTRLP-RTIADFRGRDFVIQVldkyNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDT 4806
           **************.8*************999988888***********************************99875 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MPSESFCLAA QARLDSKWLK TDIQLAFTRD GLCGLWNEMV KDGEIVYTGT ELTQNGELPP 60
RKDDGVDTSS GTKKEDLNDK EKKDEEEIPA PAYRAKSILE SWVWGKQPDV NELKECLSVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAGATCCA AAGAGGAAGA TATGAGAGAT CGAAGAAAGC AGGGGAGTAG GGAGGAGCGG 60
CGAAGGGGTT CCTCTTCCCC ATTGGCTGTG CCCGCGCAGT AGCCTCTCTG CGATTGGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004939--APC_su10/DOC_dom
IPR006624--Beta-propeller_rpt_TECPR
IPR016186--C-type_lectin-like/link
IPR021097--CPH_domain
IPR001199--Cyt_B5-like_heme/steroid-bd
IPR008979--Galactose-bd-like
IPR000569--HECT_dom
IPR010606--Mib_Herc2
IPR009091--RCC1/BLIP-II
IPR000408--Reg_chr_condens
IPR014722--Rib_L2_dom2
IPR000433--Znf_ZZ

PROSITE

PS50255--CYTOCHROME_B5_2
PS51284--DOC
PS50237--HECT
PS51416--MIB_HERC2
PS00626--RCC1_2
PS50012--RCC1_3
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2

Pfam

PF03256--ANAPC10
PF11515--Cul7
PF00173--Cyt-b5
PF00632--HECT
PF06701--MIB_HERC2
PF00415--RCC1
PF00569--ZZ

PRINTS

PR00633--RCCNDNSATION

SMART

SM01337--APC10
SM01117--Cyt-b5
SM00119--HECTc
SM00706--TECPR
SM00291--ZnF_ZZ

Gene Ontology

GO:0005743--C:mitochondrial inner membrane
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002112	Ailuropoda melanoleuca	96.97	0.00e+00	7206.00
IUUC-Atr-003065	Amborella trichopoda	35.59	4.00e-51	196.00
IUUC-Apl-003983	Anas platyrhynchos	90.53	0.00e+00	8322.00
IUUC-Aca-004300	Anolis carolinensis	89.78	0.00e+00	8199.00
IUUC-Aly-006441	Arabidopsis lyrata	34.15	9.00e-45	175.00
IUUC-Ame-010621	Astyanax mexicanus	84.01	0.00e+00	6874.00
IUUC-Bta-013067	Bos taurus	95.31	0.00e+00	8601.00
IUUC-Bdi-014093	Brachypodium distachyon	33.25	2.00e-49	191.00
IUUC-Bol-015203	Brassica oleracea	34.55	1.00e-52	201.00
IUUC-Bra-016737	Brassica rapa	34.55	4.00e-48	186.00
IUUC-Cja-019687	Callithrix jacchus	94.75	0.00e+00	8491.00
IUUC-Cfa-020672	Canis familiaris	96.14	0.00e+00	8706.00
IUUC-Cpo-021819	Cavia porcellus	93.94	0.00e+00	8496.00
IUUC-Csa-023817	Chlorocebus sabaeus	96.25	0.00e+00	8675.00
IUUC-Cho-024387	Choloepus hoffmanni	95.57	0.00e+00	1900.00
IUUC-Cin-025709	Ciona intestinalis	54.86	0.00e+00	2224.00
IUUC-Csv-026336	Ciona savignyi	41.74	0.00e+00	2961.00
IUUC-Dre-027717	Danio rerio	81.42	0.00e+00	7212.00
IUUC-Dno-029296	Dasypus novemcinctus	95.09	0.00e+00	8602.00
IUUC-Dor-030979	Dipodomys ordii	91.94	0.00e+00	2947.00
IUUC-Dme-032171	Drosophila melanogaster	60.37	0.00e+00	1527.00
IUUC-Ete-032687	Echinops telfairi	83.65	0.00e+00	2806.00
IUUC-Eca-034046	Equus caballus	95.38	0.00e+00	8634.00
IUUC-Eeu-034859	Erinaceus europaeus	94.29	0.00e+00	1942.00
IUUC-Fca-036262	Felis catus	96.12	0.00e+00	8734.00
IUUC-Fal-037562	Ficedula albicollis	90.35	0.00e+00	8253.00
IUUC-Gmo-039054	Gadus morhua	86.48	0.00e+00	1085.00
IUUC-Gga-040359	Gallus gallus	90.62	0.00e+00	8284.00
IUUC-Gac-041879	Gasterosteus aculeatus	90.93	0.00e+00	1048.00
IUUC-Ggo-044692	Gorilla gorilla	97.58	0.00e+00	4336.00
IUUC-Hsa-045995	Homo sapiens	96.45	0.00e+00	8727.00
IUUC-Hvu-047529	Hordeum vulgare	35.65	2.00e-49	191.00
IUUC-Itr-048553	Ictidomys tridecemlineatus	96.24	0.00e+00	2463.00
IUUC-Lch-049808	Latimeria chalumnae	87.32	0.00e+00	3367.00
IUUC-Lpe-051482	Leersia perrieri	33.94	4.00e-46	180.00
IUUC-Loc-052685	Lepisosteus oculatus	84.10	0.00e+00	7500.00
IUUC-Laf-053372	Loxodonta africana	94.37	0.00e+00	8545.00
IUUC-Mcc-054693	Macaca mulatta	96.35	0.00e+00	8722.00
IUUC-Meu-056660	Macropus eugenii	96.11	0.00e+00	1925.00
IUUC-Mga-059371	Meleagris gallopavo	91.33	0.00e+00	7215.00
IUUC-Mmr-060787	Microcebus murinus	96.84	0.00e+00	8826.00
IUUC-Mdo-062518	Monodelphis domestica	88.87	0.00e+00	8002.00
IUUC-Mmu-063690	Mus musculus	95.28	0.00e+00	8615.00
IUUC-Mpu-066478	Mustela putorius furo	96.00	0.00e+00	8671.00
IUUC-Mlu-067596	Myotis lucifugus	89.95	0.00e+00	4354.00
IUUC-Nle-069445	Nomascus leucogenys	96.11	0.00e+00	2204.00
IUUC-Opr-070990	Ochotona princeps	88.99	0.00e+00	3032.00
IUUC-Ont-072285	Oreochromis niloticus	82.55	0.00e+00	7302.00
IUUC-Oan-072721	Ornithorhynchus anatinus	86.66	0.00e+00	3458.00
IUUC-Oba-075573	Oryza barthii	33.68	1.00e-45	178.00
IUUC-Obr-076107	Oryza brachyantha	33.77	4.00e-50	193.00
IUUC-Ogl-077193	Oryza glaberrima	33.68	1.00e-45	178.00
IUUC-Ogu-078817	Oryza glumaepatula	33.68	1.00e-45	178.00
IUUC-Oin-079609	Oryza indica	32.75	2.00e-49	190.00
IUUC-Olo-080629	Oryza longistaminata	33.68	1.00e-45	178.00
IUUC-Ome-081686	Oryza meridionalis	33.68	4.00e-46	180.00
IUUC-Opu-084137	Oryza punctata	33.94	2.00e-46	181.00
IUUC-Oru-085013	Oryza rufipogon	33.68	1.00e-45	178.00
IUUC-Osa-085597	Oryza sativa	33.68	1.00e-45	178.00
IUUC-Ola-087346	Oryzias latipes	92.56	0.00e+00	1194.00
IUUC-Oga-088742	Otolemur garnettii	95.88	0.00e+00	8610.00
IUUC-Oar-090093	Ovis aries	95.55	0.00e+00	8645.00
IUUC-Ptr-091034	Pan troglodytes	91.38	0.00e+00	5736.00
IUUC-Pan-092783	Papio anubis	93.94	0.00e+00	8463.00
IUUC-Psi-094027	Pelodiscus sinensis	90.51	0.00e+00	7932.00
IUUC-Pfo-096208	Poecilia formosa	79.95	0.00e+00	5956.00
IUUC-Pab-097681	Pongo abelii	94.11	0.00e+00	2613.00
IUUC-Pca-100705	Procavia capensis	95.51	0.00e+00	1171.00
IUUC-Pva-103147	Pteropus vampyrus	87.27	0.00e+00	2531.00
IUUC-Rno-105458	Rattus norvegicus	95.30	0.00e+00	8603.00
IUUC-Sha-106959	Sarcophilus harrisii	81.92	0.00e+00	7000.00
IUUC-Sit-109917	Setaria italica	36.47	5.00e-48	186.00
IUUC-Sly-110961	Solanum lycopersicum	35.33	4.00e-53	203.00
IUUC-Sar-113532	Sorex araneus	85.65	0.00e+00	1831.00
IUUC-Sbi-114352	Sorghum bicolor	32.39	9.00e-50	192.00
IUUC-Ssc-115337	Sus scrofa	93.09	0.00e+00	3043.00
IUUC-Tgu-116789	Taeniopygia guttata	90.30	0.00e+00	8270.00
IUUC-Tru-118129	Takifugu rubripes	81.87	0.00e+00	7331.00
IUUC-Tsy-119302	Tarsius syrichta	85.08	0.00e+00	1281.00
IUUC-Tni-120374	Tetraodon nigroviridis	80.46	0.00e+00	7185.00
IUUC-Tca-121094	Theobroma cacao	35.31	7.00e-54	206.00
IUUC-Tae-124157	Triticum aestivum	33.51	9.00e-50	192.00
IUUC-Tur-126300	Triticum urartu	35.29	1.00e-49	192.00
IUUC-Tbe-128137	Tupaia belangeri	86.14	0.00e+00	2258.00
IUUC-Ttr-128273	Tursiops truncatus	91.02	0.00e+00	6387.00
IUUC-Vpa-130471	Vicugna pacos	83.37	0.00e+00	1485.00
IUUC-Xtr-132185	Xenopus tropicalis	85.17	0.00e+00	7706.00
IUUC-Xma-133233	Xiphophorus maculatus	82.27	0.00e+00	7295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence