iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aor-009884

Ensembl Protein ID

BAE59314

UniProt Accession

Q2UGK1; YTM1_ASPOR

Genbank Protein ID

BAE59314.1

Protein Name

Ribosome biogenesis protein ytm1

Genbank Nucleotide ID

AP007157

Gene Name

ytm1; AO090023000812

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AO090023000812	BAE59314	BAE59314

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-29	99.1	382	416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtl.lvsGsdDgtikvWDlrt 32
           gHt+ v +la    s  + l+sGs+Dgt+++WD+r 
   Q: 382  GHTNAVVSLARdpkS-SYgLISGSHDGTCRIWDIRA 416
           799999999876443.2369*************875 PP

Organism

Aspergillus oryzae

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MSEGSNSTSA AASTQRQVRV QLTSKQEDIA LPENTGPILV PTGLRRYALS TLVNNLLGND 60
KPIPFEFLIN GSFLRTSIDE YLTANGISAE TTLEIEYVRA LIPPLHIASF EHDDWVSSVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGAGG GTTCAAATTC CACTTCGGCT GCGGCCTCTA CGCAGAGGCA GGTTCGCGTG 60
CAGCTTACTA GCAAACAAGA AGATATTGCA CTACCTGAGA ATACCGGCCC GATTCTGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR028599--WDR12/Ytm1

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0051276--P:chromosome organization
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

aor:AOR_1_1410144

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000532	Aegilops tauschii	31.84	1.00e-46	178.00
IUUC-Aml-001997	Ailuropoda melanoleuca	30.43	2.00e-39	154.00
IUUC-Atr-002544	Amborella trichopoda	28.95	4.00e-40	156.00
IUUC-Apl-003981	Anas platyrhynchos	31.42	8.00e-42	162.00
IUUC-Aca-004370	Anolis carolinensis	30.26	5.00e-45	173.00
IUUC-Aly-006455	Arabidopsis lyrata	31.60	5.00e-45	173.00
IUUC-Ath-006669	Arabidopsis thaliana	31.60	2.00e-41	161.00
IUUC-Ago-007864	Ashbya gossypii	43.12	4.00e-104	369.00
IUUC-Acl-008177	Aspergillus clavatus	85.66	0.00e+00	799.00
IUUC-Afl-008617	Aspergillus flavus	99.38	0.00e+00	874.00
IUUC-Afu-008752	Aspergillus fumigatus	88.77	0.00e+00	750.00
IUUC-Ani-009136	Aspergillus nidulans	85.19	0.00e+00	760.00
IUUC-Ang-009701	Aspergillus niger	89.06	0.00e+00	756.00
IUUC-Ate-010472	Aspergillus terreus	88.18	5.00e-150	521.00
IUUC-Ame-011432	Astyanax mexicanus	28.29	1.00e-45	175.00
IUUC-Bgr-012218	Blumeria graminis	58.87	3.00e-149	519.00
IUUC-Bta-012829	Bos taurus	29.41	3.00e-39	153.00
IUUC-Bci-013953	Botrytis cinerea	57.02	4.00e-155	539.00
IUUC-Bdi-014351	Brachypodium distachyon	31.54	5.00e-43	166.00
IUUC-Bol-016190	Brassica oleracea	32.08	9.00e-44	169.00
IUUC-Bra-016988	Brassica rapa	31.71	6.00e-43	166.00
IUUC-Cel-018569	Caenorhabditis elegans	24.04	6.00e-23	100.00
IUUC-Cja-019468	Callithrix jacchus	30.18	2.00e-39	154.00
IUUC-Cfa-020471	Canis familiaris	28.46	9.00e-36	142.00
IUUC-Cpo-022260	Cavia porcellus	29.92	1.00e-37	148.00
IUUC-Cre-022614	Chlamydomonas reinhardtii	33.41	1.00e-45	175.00
IUUC-Csa-023989	Chlorocebus sabaeus	30.18	1.00e-38	152.00
IUUC-Cho-024426	Choloepus hoffmanni	28.53	6.00e-30	122.00
IUUC-Cin-025789	Ciona intestinalis	27.05	1.00e-35	142.00
IUUC-Cgl-026562	Colletotrichum gloeosporioides	51.31	1.00e-35	140.00
IUUC-Cne-027063	Cryptococcus neoformans	28.07	9.00e-37	145.00
IUUC-Dre-027907	Danio rerio	29.23	2.00e-45	174.00
IUUC-Dno-029225	Dasypus novemcinctus	29.92	1.00e-39	155.00
IUUC-Dor-031082	Dipodomys ordii	26.91	2.00e-16	78.20
IUUC-Dse-031308	Dothistroma septosporum	51.40	9.00e-131	457.00
IUUC-Dme-032189	Drosophila melanogaster	27.46	3.00e-37	147.00
IUUC-Ete-032247	Echinops telfairi	27.44	2.00e-32	131.00
IUUC-Eca-034285	Equus caballus	29.92	5.00e-39	153.00
IUUC-Eeu-035322	Erinaceus europaeus	26.15	8.00e-33	132.00
IUUC-Fca-036114	Felis catus	30.43	4.00e-40	157.00
IUUC-Fal-036891	Ficedula albicollis	31.09	1.00e-35	142.00
IUUC-Fox-037965	Fusarium oxysporum	51.27	5.00e-131	459.00
IUUC-Fso-038244	Fusarium solani	53.12	2.00e-132	464.00
IUUC-Gmo-039040	Gadus morhua	29.95	1.00e-46	178.00
IUUC-Ggr-040093	Gaeumannomyces graminis	46.88	8.00e-106	375.00
IUUC-Gga-040610	Gallus gallus	31.46	5.00e-44	169.00
IUUC-Gac-042117	Gasterosteus aculeatus	29.56	2.00e-44	171.00
IUUC-Gma-043756	Glycine max	33.72	1.00e-49	188.00
IUUC-Ggo-045179	Gorilla gorilla	30.51	2.00e-40	158.00
IUUC-Hsa-046114	Homo sapiens	30.43	2.00e-39	154.00
IUUC-Hvu-047331	Hordeum vulgare	30.67	8.00e-38	149.00
IUUC-Itr-048275	Ictidomys tridecemlineatus	29.16	2.00e-38	151.00
IUUC-Kpa-049304	Komagataella pastoris	45.21	1.00e-115	407.00
IUUC-Lch-050655	Latimeria chalumnae	28.45	7.00e-31	125.00
IUUC-Lpe-051675	Leersia perrieri	30.44	2.00e-42	164.00
IUUC-Loc-052868	Lepisosteus oculatus	28.78	5.00e-44	169.00
IUUC-Lma-053258	Leptosphaeria maculans	54.03	1.00e-143	502.00
IUUC-Laf-053993	Loxodonta africana	29.67	5.00e-39	153.00
IUUC-Mcc-055128	Macaca mulatta	24.08	2.00e-24	104.00
IUUC-Meu-056501	Macropus eugenii	28.97	2.00e-34	137.00
IUUC-Mor-057114	Magnaporthe oryzae	50.92	7.00e-131	458.00
IUUC-Mpo-057463	Magnaporthe poae	45.24	7.00e-46	174.00
IUUC-Mtr-058367	Medicago truncatula	32.31	3.00e-43	167.00
IUUC-Mla-059107	Melampsora laricipopulina	29.22	5.00e-46	176.00
IUUC-Mga-059745	Meleagris gallopavo	31.20	1.00e-43	168.00
IUUC-Mvi-060362	Microbotryum violaceum	29.61	1.00e-47	182.00
IUUC-Mdo-062257	Monodelphis domestica	29.16	9.00e-41	159.00
IUUC-Mmu-063546	Mus musculus	29.20	1.00e-40	159.00
IUUC-Mac-065540	Musa acuminata	31.92	5.00e-41	159.00
IUUC-Mpu-066284	Mustela putorius furo	30.18	9.00e-40	155.00
IUUC-Mlu-067241	Myotis lucifugus	29.92	3.00e-39	154.00
IUUC-Nfi-068260	Neosartorya fischeri	88.11	0.00e+00	783.00
IUUC-Ncr-068719	Neurospora crassa	55.00	6.00e-134	468.00
IUUC-Nle-068981	Nomascus leucogenys	29.54	2.00e-37	148.00
IUUC-Opr-071218	Ochotona princeps	27.18	6.00e-37	146.00
IUUC-Ont-071646	Oreochromis niloticus	29.20	6.00e-43	166.00
IUUC-Oan-073453	Ornithorhynchus anatinus	27.22	3.00e-46	177.00
IUUC-Ocu-074008	Oryctolagus cuniculus	29.30	2.00e-40	157.00
IUUC-Oba-075712	Oryza barthii	28.09	2.00e-31	127.00
IUUC-Obr-076721	Oryza brachyantha	30.84	3.00e-44	170.00
IUUC-Ogl-077229	Oryza glaberrima	31.26	2.00e-45	174.00
IUUC-Ogu-078977	Oryza glumaepatula	28.06	4.00e-31	127.00
IUUC-Oin-079683	Oryza indica	31.44	3.00e-45	173.00
IUUC-Olo-080291	Oryza longistaminata	29.97	1.00e-26	111.00
IUUC-Ome-081834	Oryza meridionalis	31.82	6.00e-45	173.00
IUUC-Oni-082507	Oryza nivara	30.02	8.00e-39	152.00
IUUC-Opu-083396	Oryza punctata	30.82	2.00e-43	168.00
IUUC-Oru-085220	Oryza rufipogon	30.02	7.00e-39	152.00
IUUC-Osa-085767	Oryza sativa	31.44	3.00e-45	173.00
IUUC-Ola-087420	Oryzias latipes	29.44	2.00e-45	174.00
IUUC-Olu-087740	Ostreococcus lucimarinus	27.01	1.00e-31	128.00
IUUC-Oga-088264	Otolemur garnettii	29.06	5.00e-37	146.00
IUUC-Oar-089335	Ovis aries	28.90	2.00e-38	151.00
IUUC-Ptr-091320	Pan troglodytes	30.43	2.00e-39	154.00
IUUC-Pan-092833	Papio anubis	30.18	7.00e-39	152.00
IUUC-Psi-093504	Pelodiscus sinensis	30.43	1.00e-40	158.00
IUUC-Pma-094189	Petromyzon marinus	28.78	2.00e-38	150.00
IUUC-Pno-094929	Phaeosphaeria nodorum	54.49	1.00e-142	497.00
IUUC-Ppa-095429	Physcomitrella patens	34.30	3.00e-54	203.00
IUUC-Pfo-096337	Poecilia formosa	29.67	3.00e-46	177.00
IUUC-Pab-097571	Pongo abelii	30.02	2.00e-39	154.00
IUUC-Pop-099977	Populus trichocarpa	31.63	1.00e-42	165.00
IUUC-Pca-100394	Procavia capensis	27.62	2.00e-30	124.00
IUUC-Ppe-101848	Prunus persica	32.85	5.00e-47	179.00
IUUC-Pva-102921	Pteropus vampyrus	28.12	4.00e-16	77.00
IUUC-Pgr-103637	Puccinia graminis	28.79	5.00e-50	189.00
IUUC-Ptt-103781	Puccinia triticina	28.57	7.00e-52	196.00
IUUC-Pte-104135	Pyrenophora teres	56.15	4.00e-136	477.00
IUUC-Pyt-104609	Pyrenophora triticirepentis	54.60	2.00e-134	470.00
IUUC-Rno-105114	Rattus norvegicus	29.67	3.00e-39	154.00
IUUC-Sce-106401	Saccharomyces cerevisiae	43.46	2.00e-107	380.00
IUUC-Sha-107122	Sarcophilus harrisii	28.23	6.00e-35	139.00
IUUC-Sja-107766	Schizosaccharomyces japonicus	37.08	5.00e-84	303.00
IUUC-Spo-108134	Schizosaccharomyces pombe	38.35	7.00e-86	308.00
IUUC-Ssl-108398	Sclerotinia sclerotiorum	58.07	1.00e-160	557.00
IUUC-Smo-108720	Selaginella moellendorffii	27.48	7.00e-38	149.00
IUUC-Sit-110354	Setaria italica	29.95	2.00e-44	171.00
IUUC-Sly-111178	Solanum lycopersicum	31.34	7.00e-46	176.00
IUUC-Stu-112169	Solanum tuberosum	31.39	2.00e-45	174.00
IUUC-Sbi-114193	Sorghum bicolor	30.40	5.00e-43	166.00
IUUC-Sre-115002	Sporisorium reilianum	26.45	1.00e-35	142.00
IUUC-Ssc-116066	Sus scrofa	29.41	3.00e-38	150.00
IUUC-Tgu-117048	Taeniopygia guttata	31.69	9.00e-42	162.00
IUUC-Tni-119820	Tetraodon nigroviridis	29.71	1.00e-41	161.00
IUUC-Tca-121605	Theobroma cacao	31.54	2.00e-47	181.00
IUUC-Tre-121947	Trichoderma reesei	50.94	4.00e-130	456.00
IUUC-Tvi-122481	Trichoderma virens	51.47	1.00e-132	464.00
IUUC-Tae-123504	Triticum aestivum	32.08	4.00e-47	180.00
IUUC-Tur-126586	Triticum urartu	31.17	2.00e-41	160.00
IUUC-Tme-126900	Tuber melanosporum	47.40	2.00e-111	394.00
IUUC-Uma-129628	Ustilago maydis	26.06	2.00e-26	112.00
IUUC-Vpa-130260	Vicugna pacos	29.41	8.00e-40	155.00
IUUC-Vvi-131009	Vitis vinifera	34.76	6.00e-52	196.00
IUUC-Xtr-132083	Xenopus tropicalis	29.93	3.00e-45	173.00
IUUC-Xma-133094	Xiphophorus maculatus	28.19	1.00e-46	179.00
IUUC-Yli-134531	Yarrowia lipolytica	37.50	7.00e-73	266.00
IUUC-Zma-135509	Zea mays	31.44	1.00e-45	175.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence