iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s01880	POPTR_0010s01880.1	POPTR_0010s01880.1
POPTR_0010s01880	POPTR_0010s01880.2	POPTR_0010s01880.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	57.84	9.00e-116	414.00	IUUC-Ath-006867

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQATQAALSN GVAEGSPVEA DSKIVEPSNE VSNPEPSGRR SDLSLQIPPR HVGFGTSRSG 60
KGLLHSQNSY KGRSPGGFLR TLSLKKKAAA PDGERSSLLT ADYKTAPDSP IMASFKSAFS 120

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Nucleotide Sequence
(Fasta)

GGAAACACCA ACTGTCACTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCACAT 60
ATATGTTCCT TGATTCTCTC TTTCTCAATC TTTGTTGGTA GATATTTTTG ATCCTGTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0010s01880g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005565	Arabidopsis lyrata	53.90	3.00e-112	398.00
IUUC-Ath-006867	Arabidopsis thaliana	57.47	2.00e-112	398.00
IUUC-Bta-012719	Bos taurus	36.84	2.00e-08	52.40
IUUC-Bol-015615	Brassica oleracea	56.16	8.00e-113	399.00
IUUC-Bra-017184	Brassica rapa	55.32	2.00e-113	401.00
IUUC-Cpo-021311	Cavia porcellus	36.84	1.00e-08	53.10
IUUC-Csa-023212	Chlorocebus sabaeus	36.84	4.00e-08	52.00
IUUC-Cho-024792	Choloepus hoffmanni	36.84	1.00e-08	52.80
IUUC-Csv-026342	Ciona savignyi	30.39	9.00e-10	56.60
IUUC-Dre-028502	Danio rerio	45.83	6.00e-09	54.70
IUUC-Dno-029652	Dasypus novemcinctus	36.84	1.00e-08	53.10
IUUC-Eca-034077	Equus caballus	36.84	1.00e-08	53.10
IUUC-Gac-042171	Gasterosteus aculeatus	36.84	3.00e-08	52.40
IUUC-Gma-043613	Glycine max	67.30	5.00e-145	506.00
IUUC-Ggo-044663	Gorilla gorilla	36.84	2.00e-08	52.80
IUUC-Hsa-046250	Homo sapiens	36.84	2.00e-08	52.80
IUUC-Itr-048606	Ictidomys tridecemlineatus	36.84	2.00e-08	52.40
IUUC-Laf-054358	Loxodonta africana	36.84	1.00e-08	53.50
IUUC-Mcc-055132	Macaca mulatta	36.84	2.00e-08	52.80
IUUC-Mtr-058058	Medicago truncatula	63.54	2.00e-132	464.00
IUUC-Mmr-061668	Microcebus murinus	36.84	2.00e-08	52.80
IUUC-Mdo-062134	Monodelphis domestica	36.84	3.00e-08	52.40
IUUC-Mmu-063140	Mus musculus	36.84	2.00e-08	52.40
IUUC-Mac-065242	Musa acuminata	55.49	3.00e-103	367.00
IUUC-Mpu-065878	Mustela putorius furo	36.84	1.00e-08	53.10
IUUC-Nle-068993	Nomascus leucogenys	36.84	2.00e-08	52.80
IUUC-Opr-071182	Ochotona princeps	36.84	1.00e-08	53.10
IUUC-Ont-072656	Oreochromis niloticus	45.83	2.00e-08	53.10
IUUC-Olu-087883	Ostreococcus lucimarinus	29.09	5.00e-12	63.90
IUUC-Oga-088000	Otolemur garnettii	36.84	2.00e-08	52.80
IUUC-Ptr-090674	Pan troglodytes	36.84	2.00e-08	52.80
IUUC-Pan-092400	Papio anubis	36.84	2.00e-08	53.10
IUUC-Ppe-101242	Prunus persica	65.88	5.00e-138	483.00
IUUC-Sha-106546	Sarcophilus harrisii	36.84	2.00e-08	52.80
IUUC-Sly-111220	Solanum lycopersicum	60.15	7.00e-109	386.00
IUUC-Stu-112321	Solanum tuberosum	60.75	3.00e-124	437.00
IUUC-Tni-120144	Tetraodon nigroviridis	37.93	1.00e-08	53.10
IUUC-Tca-121528	Theobroma cacao	69.67	1.00e-152	531.00
IUUC-Tbe-128092	Tupaia belangeri	36.84	8.00e-09	53.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence