iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114552

UUCD1 version

UUC-SoB-00695

Ensembl Protein ID

Sb04g023890.1

UniProt Accession

A0A194YQI5; A0A194YQI5_SORBI

Genbank Protein ID

KXG30492.1; KXG30493.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G190700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023890	Sb04g023890.1	Sb04g023890.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	40.38	1.00e-07	54.70	IUUC-Hsa-046250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGDHVAVDVG ELVASRVGEA AGLVSRGKEE TEALIGMVEC RICQEEDLAK NLESPCACSG 60
SLKYAHRECV QRWCNEKGDI TCEICHESYK PGYTAPPQVH HDETTIEISG GDWTISGNRL 120

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Nucleotide Sequence
(Fasta)

ATCGTTTCCA AGCCTTGCGT TTCGTGGGAT TTATTGAGGC GAGGGCTTCG ATTCGACCCA 60
GGAATCGCCC AAATCCGCTC GTCTTCGACT TCGGTTCATC CCCTGGACCG AAATTTCTAG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022143--DUF3675
IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12428--DUF3675
PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000992	Aegilops tauschii	38.50	6.00e-25	106.00
IUUC-Aml-001373	Ailuropoda melanoleuca	41.18	1.00e-08	52.80
IUUC-Atr-002860	Amborella trichopoda	69.43	3.00e-76	277.00
IUUC-Aly-005700	Arabidopsis lyrata	56.16	1.00e-44	172.00
IUUC-Ath-007473	Arabidopsis thaliana	61.97	9.00e-56	209.00
IUUC-Ame-010820	Astyanax mexicanus	40.38	5.00e-09	54.30
IUUC-Bta-012719	Bos taurus	40.38	7.00e-09	53.90
IUUC-Bol-016602	Brassica oleracea	57.47	5.00e-60	223.00
IUUC-Bra-016861	Brassica rapa	59.15	2.00e-59	221.00
IUUC-Cpo-021311	Cavia porcellus	40.38	4.00e-09	54.30
IUUC-Cre-022732	Chlamydomonas reinhardtii	62.71	1.00e-20	90.50
IUUC-Csa-023212	Chlorocebus sabaeus	41.18	2.00e-08	52.80
IUUC-Cho-024792	Choloepus hoffmanni	40.38	5.00e-09	53.90
IUUC-Dre-027921	Danio rerio	40.38	5.00e-09	54.30
IUUC-Dno-029652	Dasypus novemcinctus	40.38	5.00e-09	54.30
IUUC-Dor-030811	Dipodomys ordii	40.38	6.00e-09	54.30
IUUC-Eca-034077	Equus caballus	40.38	4.00e-09	54.30
IUUC-Gac-042285	Gasterosteus aculeatus	42.31	5.00e-09	54.30
IUUC-Gma-043460	Glycine max	42.59	3.00e-46	177.00
IUUC-Ggo-044663	Gorilla gorilla	40.38	6.00e-09	53.90
IUUC-Hsa-046250	Homo sapiens	40.38	5.00e-09	54.30
IUUC-Itr-048606	Ictidomys tridecemlineatus	40.38	5.00e-09	53.90
IUUC-Lch-049563	Latimeria chalumnae	38.33	3.00e-09	55.10
IUUC-Lpe-051036	Leersia perrieri	42.08	2.00e-21	94.70
IUUC-Laf-054358	Loxodonta africana	40.38	4.00e-09	54.70
IUUC-Mcc-055132	Macaca mulatta	40.38	5.00e-09	54.30
IUUC-Meu-056883	Macropus eugenii	42.00	4.00e-08	52.00
IUUC-Mtr-057809	Medicago truncatula	39.17	3.00e-45	174.00
IUUC-Mmr-061668	Microcebus murinus	40.38	6.00e-09	54.30
IUUC-Mdo-062134	Monodelphis domestica	40.38	6.00e-09	53.90
IUUC-Mmu-063140	Mus musculus	40.38	8.00e-09	53.90
IUUC-Mac-064882	Musa acuminata	59.58	1.00e-79	288.00
IUUC-Mpu-065878	Mustela putorius furo	40.38	4.00e-09	54.30
IUUC-Mlu-067572	Myotis lucifugus	40.38	4.00e-09	54.30
IUUC-Nle-068993	Nomascus leucogenys	40.38	6.00e-09	54.30
IUUC-Opr-071182	Ochotona princeps	40.38	4.00e-09	54.30
IUUC-Osa-085634	Oryza sativa	65.96	1.00e-67	248.00
IUUC-Ola-086356	Oryzias latipes	41.18	9.00e-09	53.90
IUUC-Oga-088000	Otolemur garnettii	40.38	5.00e-09	54.30
IUUC-Ptr-090674	Pan troglodytes	40.38	5.00e-09	54.30
IUUC-Pan-092400	Papio anubis	40.38	5.00e-09	54.30
IUUC-Sha-106546	Sarcophilus harrisii	40.38	5.00e-09	54.30
IUUC-Smo-109144	Selaginella moellendorffii	66.85	1.00e-54	204.00
IUUC-Sit-110567	Setaria italica	97.14	3.00e-124	436.00
IUUC-Sly-110996	Solanum lycopersicum	64.32	4.00e-65	240.00
IUUC-Stu-112782	Solanum tuberosum	64.79	5.00e-66	243.00
IUUC-Tru-118357	Takifugu rubripes	40.38	6.00e-09	54.30
IUUC-Tbe-128092	Tupaia belangeri	40.38	3.00e-09	54.70
IUUC-Vvi-131510	Vitis vinifera	63.44	5.00e-57	214.00
IUUC-Xtr-131868	Xenopus tropicalis	36.00	2.00e-09	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence