iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002219

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01049622

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000001812.1	ENSAMET00000002010.1	ENSAMEP00000001933.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-51	169.0	111	146
UBD/Beta-Prp	1.60e-74	250.8	27	279

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht +v+c +f +d +l+vs+s D+tik+WD++   +
   Q: 111  HTHWVRCAKFsPDgRLIVSCSEDKTIKIWDTTNKQC 146
           9**********999****************987665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           hk+v+t+v+fsp ++lla++srd+t+++w  ++  + ++++ h+a+v++v+fs +g++l+t+seD+ ikvw++     +++l +h++ v
   Q: 27   HKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSANGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWV 115
           899************************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
           ++ +fsp+g  +vs s+d+ti++wd+ ++qc++  +s   g+ n v ++p+g +++s++ D tv++Wd++ +kll++ +  h + v+++
   Q: 116  RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN-NFSDSAGFANFVDFNPNGTCIASAGSDHTVKVWDIRVNKLLQHYQV-HSGGVNCV 202
           *********************************.*********************************************8.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..dlrsgdllktlq 261
           sf++++++l+++s dgt+k+ dl +g+ ++tl+ght +v  v fs+ +e++ sg++D ++ +W  + +  ++  +++
   Q: 203  SFHPSSNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADAQVLLWrtNFDDLNCKDMMK 279
           ***************************************************************99666666666655 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

IATASWDTFL MLWNCKPQAR AFRYVGHKDV VTSVQFSPLG NLLASASRDR TVRLWIPDKR 60
GKSSEFKAHT APVRSVDFSA NGQFLATASE DKSIKVWNMY RQRFLYSLYR HTHWVRCAKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGCTACTG CTTCTTGGGA TACGTTTCTC ATGCTATGGA ATTGCAAGCC ACAAGCCAGA 60
GCTTTCAGAT ATGTGGGTCA CAAGGATGTT GTAACCAGCG TGCAGTTTTC CCCACTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004219	Anas platyrhynchos	62.41	3.00e-161	561.00
IUUC-Aca-005197	Anolis carolinensis	57.74	5.00e-155	540.00
IUUC-Ame-011000	Astyanax mexicanus	54.91	1.00e-144	506.00
IUUC-Bta-012706	Bos taurus	90.58	0.00e+00	833.00
IUUC-Cja-019185	Callithrix jacchus	83.89	0.00e+00	759.00
IUUC-Cfa-021274	Canis familiaris	94.18	0.00e+00	862.00
IUUC-Cpo-022351	Cavia porcellus	82.44	0.00e+00	778.00
IUUC-Csa-023032	Chlorocebus sabaeus	83.45	0.00e+00	748.00
IUUC-Cho-024508	Choloepus hoffmanni	79.81	0.00e+00	677.00
IUUC-Dre-028703	Danio rerio	55.05	4.00e-143	501.00
IUUC-Dno-028915	Dasypus novemcinctus	89.89	0.00e+00	835.00
IUUC-Dor-030306	Dipodomys ordii	84.75	6.00e-180	623.00
IUUC-Ete-032353	Echinops telfairi	71.99	0.00e+00	627.00
IUUC-Eca-034136	Equus caballus	91.26	0.00e+00	833.00
IUUC-Eeu-034611	Erinaceus europaeus	79.90	4.00e-180	623.00
IUUC-Fca-036205	Felis catus	92.22	0.00e+00	807.00
IUUC-Fal-036947	Ficedula albicollis	53.30	1.00e-132	466.00
IUUC-Gga-040847	Gallus gallus	60.83	3.00e-153	535.00
IUUC-Ggo-045194	Gorilla gorilla	88.37	0.00e+00	820.00
IUUC-Hsa-047026	Homo sapiens	88.37	0.00e+00	818.00
IUUC-Itr-048943	Ictidomys tridecemlineatus	85.01	0.00e+00	796.00
IUUC-Lch-050067	Latimeria chalumnae	57.84	2.00e-158	551.00
IUUC-Loc-052409	Lepisosteus oculatus	56.50	2.00e-149	522.00
IUUC-Laf-053428	Loxodonta africana	88.81	0.00e+00	806.00
IUUC-Mcc-054772	Macaca mulatta	88.81	0.00e+00	817.00
IUUC-Meu-056496	Macropus eugenii	74.48	7.00e-152	530.00
IUUC-Mga-059276	Meleagris gallopavo	60.72	7.00e-159	553.00
IUUC-Mmr-061525	Microcebus murinus	87.70	0.00e+00	818.00
IUUC-Mdo-062351	Monodelphis domestica	70.04	0.00e+00	676.00
IUUC-Mmu-063834	Mus musculus	81.43	0.00e+00	754.00
IUUC-Mpu-066453	Mustela putorius furo	94.85	0.00e+00	837.00
IUUC-Mlu-067909	Myotis lucifugus	89.01	0.00e+00	811.00
IUUC-Nle-069206	Nomascus leucogenys	88.14	0.00e+00	818.00
IUUC-Opr-070566	Ochotona princeps	73.83	0.00e+00	670.00
IUUC-Oan-073726	Ornithorhynchus anatinus	67.44	6.00e-175	606.00
IUUC-Ocu-074639	Oryctolagus cuniculus	88.59	0.00e+00	822.00
IUUC-Ola-086913	Oryzias latipes	51.13	3.00e-131	461.00
IUUC-Oga-088061	Otolemur garnettii	89.49	4.00e-175	607.00
IUUC-Oar-090228	Ovis aries	85.20	0.00e+00	821.00
IUUC-Ptr-091420	Pan troglodytes	88.59	0.00e+00	822.00
IUUC-Pan-092228	Papio anubis	88.59	0.00e+00	816.00
IUUC-Psi-093309	Pelodiscus sinensis	62.98	1.00e-158	552.00
IUUC-Pab-098109	Pongo abelii	88.81	0.00e+00	824.00
IUUC-Pca-101012	Procavia capensis	68.54	7.00e-166	576.00
IUUC-Pva-102712	Pteropus vampyrus	91.05	0.00e+00	831.00
IUUC-Rno-105260	Rattus norvegicus	81.66	0.00e+00	754.00
IUUC-Sar-113446	Sorex araneus	76.51	0.00e+00	702.00
IUUC-Ssc-115794	Sus scrofa	93.47	0.00e+00	672.00
IUUC-Tgu-116770	Taeniopygia guttata	54.22	8.00e-131	460.00
IUUC-Tru-117968	Takifugu rubripes	53.02	2.00e-132	465.00
IUUC-Tsy-119316	Tarsius syrichta	73.48	0.00e+00	659.00
IUUC-Tni-119953	Tetraodon nigroviridis	48.10	8.00e-115	407.00
IUUC-Tbe-128071	Tupaia belangeri	84.60	0.00e+00	751.00
IUUC-Ttr-129267	Tursiops truncatus	90.60	0.00e+00	835.00
IUUC-Vpa-130823	Vicugna pacos	81.60	1.00e-161	562.00
IUUC-Xtr-131768	Xenopus tropicalis	57.60	3.00e-151	528.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence