iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048943

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01034619

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000006306.2	ENSSTOT00000006300.2	ENSSTOP00000005633.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-49	164.2	111	146
UBD/Beta-Prp	2.20e-71	240.5	27	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht +v+c +f +d +l+vs+s D+tik+WD++   +
   Q: 111  HTHWVRCAKFsPDgRLIVSCSEDKTIKIWDTTNKQC 146
           9**********999****************987665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           hk+v+t+v+fsp ++lla++srd+t+++w  +++ + +++  h+a+v++v+fs+dg++lvt+seD+ ikvw++     +++l +h++ v
   Q: 27   HKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKKGKSSEFRAHTAPVRSVDFSSDGQFLVTASEDKSIKVWNMFRQRFLYSLYRHTHWV 115
           899************************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
           ++ +fsp+g  +vs s+d+ti++wd+ ++qc++  ls   g+ n v ++p+g +++s++ D  vr+Wd++ +kll++ +  h   v+s+
   Q: 116  RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN-NLSDSVGFANFVDFNPNGTCIASAGSDHSVRIWDIRVNKLLQHYQV-HSCGVNSI 202
           *********************************.*********************************************8.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..........d 250
           sf+++g++l+++s dgt+k+ dl +g+ ++tl+ght +v  v fs+ +e + sg++D ++ +W          d
   Q: 203  SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSRSGEQFTSGGADTQVLLWrtnfdelhckD 276
           ***************************************************************77554444443 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

IVTASWDTFL MLWNLKPNAR AFRYVGHKDV VTSVQFSPLG NLLASASRDR TVRLWIPDKK 60
GKSSEFRAHT APVRSVDFSS DGQFLVTASE DKSIKVWNMF RQRFLYSLYR HTHWVRCAKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGTTACTG CTTCTTGGGA TACGTTTCTC ATGCTATGGA ATTTGAAGCC GAACGCTAGA 60
GCTTTCAGAT ATGTGGGTCA TAAGGATGTT GTAACCAGTG TGCAGTTTTC TCCCCTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002219	Ailuropoda melanoleuca	85.01	0.00e+00	796.00
IUUC-Apl-004219	Anas platyrhynchos	60.59	3.00e-157	547.00
IUUC-Aca-005197	Anolis carolinensis	57.87	1.00e-158	552.00
IUUC-Ame-011000	Astyanax mexicanus	54.75	1.00e-143	502.00
IUUC-Bta-012706	Bos taurus	86.29	0.00e+00	807.00
IUUC-Cja-019185	Callithrix jacchus	82.29	0.00e+00	755.00
IUUC-Cfa-021274	Canis familiaris	87.22	0.00e+00	810.00
IUUC-Cpo-022351	Cavia porcellus	82.44	0.00e+00	791.00
IUUC-Csa-023032	Chlorocebus sabaeus	81.39	0.00e+00	739.00
IUUC-Cho-024508	Choloepus hoffmanni	78.05	0.00e+00	668.00
IUUC-Dre-028703	Danio rerio	56.65	6.00e-142	496.00
IUUC-Dno-028915	Dasypus novemcinctus	86.49	0.00e+00	820.00
IUUC-Dor-030306	Dipodomys ordii	85.88	6.00e-178	616.00
IUUC-Ete-032353	Echinops telfairi	69.61	6.00e-176	609.00
IUUC-Eca-034136	Equus caballus	87.19	0.00e+00	807.00
IUUC-Eeu-034611	Erinaceus europaeus	77.52	3.00e-178	617.00
IUUC-Fca-036205	Felis catus	86.01	0.00e+00	768.00
IUUC-Fal-036947	Ficedula albicollis	53.65	2.00e-135	475.00
IUUC-Gga-040847	Gallus gallus	58.64	8.00e-151	526.00
IUUC-Ggo-045194	Gorilla gorilla	87.67	0.00e+00	820.00
IUUC-Hsa-047026	Homo sapiens	87.67	0.00e+00	820.00
IUUC-Lch-050067	Latimeria chalumnae	57.52	2.00e-153	535.00
IUUC-Laf-053428	Loxodonta africana	86.10	0.00e+00	778.00
IUUC-Mcc-054772	Macaca mulatta	87.67	0.00e+00	816.00
IUUC-Meu-056496	Macropus eugenii	72.14	4.00e-149	521.00
IUUC-Mga-059276	Meleagris gallopavo	59.37	1.00e-157	549.00
IUUC-Mmr-061525	Microcebus murinus	87.44	0.00e+00	809.00
IUUC-Mdo-062351	Monodelphis domestica	68.20	0.00e+00	664.00
IUUC-Mmu-063834	Mus musculus	82.06	0.00e+00	775.00
IUUC-Mpu-066453	Mustela putorius furo	83.63	0.00e+00	769.00
IUUC-Mlu-067909	Myotis lucifugus	84.04	0.00e+00	784.00
IUUC-Nle-069206	Nomascus leucogenys	87.44	0.00e+00	828.00
IUUC-Opr-070566	Ochotona princeps	73.54	0.00e+00	680.00
IUUC-Oan-073726	Ornithorhynchus anatinus	65.90	4.00e-170	590.00
IUUC-Ocu-074639	Oryctolagus cuniculus	87.22	0.00e+00	822.00
IUUC-Ola-086913	Oryzias latipes	52.60	4.00e-134	471.00
IUUC-Oga-088061	Otolemur garnettii	87.58	1.00e-171	594.00
IUUC-Oar-090228	Ovis aries	80.97	0.00e+00	799.00
IUUC-Ptr-091420	Pan troglodytes	87.89	0.00e+00	823.00
IUUC-Pan-092228	Papio anubis	87.44	0.00e+00	815.00
IUUC-Psi-093309	Pelodiscus sinensis	61.12	1.00e-155	542.00
IUUC-Pab-098109	Pongo abelii	88.34	0.00e+00	827.00
IUUC-Pca-101012	Procavia capensis	65.02	1.00e-162	565.00
IUUC-Pva-102712	Pteropus vampyrus	87.00	0.00e+00	811.00
IUUC-Rno-105260	Rattus norvegicus	81.17	0.00e+00	771.00
IUUC-Sar-113446	Sorex araneus	74.44	0.00e+00	698.00
IUUC-Ssc-115794	Sus scrofa	89.74	0.00e+00	650.00
IUUC-Tgu-116770	Taeniopygia guttata	53.79	2.00e-131	462.00
IUUC-Tru-117968	Takifugu rubripes	53.14	1.00e-132	466.00
IUUC-Tsy-119316	Tarsius syrichta	73.20	0.00e+00	667.00
IUUC-Tni-119953	Tetraodon nigroviridis	49.44	1.00e-116	412.00
IUUC-Tbe-128071	Tupaia belangeri	83.87	0.00e+00	749.00
IUUC-Ttr-129267	Tursiops truncatus	86.59	0.00e+00	805.00
IUUC-Vpa-130823	Vicugna pacos	80.24	5.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence