iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069206

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01186483

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000005523.2	ENSNLET00000007042.2	ENSNLEP00000006704.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-54	178.0	143	178
UBD/Beta-Prp	1.80e-74	250.6	98	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht +v+c +f +d +l+vs+s D+tik+WD++   +
   Q: 143  HTHWVRCAKFsPDgRLIVSCSEDKTIKIWDTTNKQC 178
           9**********999****************987665 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           +++h+++++ v+fs d++llat+s+d++ikvw++ ++ +l sl+ h+  v++ kfspdg ++v++seD+tik+wd  + +cv  ++   
   Q: 98   FKAHTAPVRNVDFSADGQLLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
           56889999999999999999999999999999999999999999999999999999999999999999999999999999999999777 PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
             +  ++f+psg  ++s+++d+t++vwd++ ++ l+   ++h+g vnc+++hp+gn+l+++s D+t+++ dl  g+l++tl+g ht++v
   Q: 187  GFANFVDFNPSGTCIASAGSDQTVKVWDIRVNKLLQ-HYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG-HTGPV 273
           778889999999999999999999999999999999.9999999999999999999999999999999999999999999998.99999 PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlq 210
             +sf++ g+ ++sg+ d++v lw   
   Q: 274  FTVSFSKGGELFASGGADTQVLLWRTN 300
           999999999999999999999999765 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MASATEDPVL ERYFKGHKAA ITSLDLSPNG KQLATASWDT FLMLWNFKPH ARAYRYVGHK 60
DAVTSVQFSP HGNLLASASR DRTVRLWIPD KRGKFSEFKA HTAPVRNVDF SADGQLLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCAG CCACGGTAAG GACGGGTTGG AGGTGGGGGG GGTCCCTCCC TGGAGCCTGT 60
CCCGCGGGCT GCAGGGGCCA GGTCCCGGCC GAACCCGCAC CTGGCGGGAG ATGGAGGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

KEGG

nle:100602147

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002219	Ailuropoda melanoleuca	88.14	0.00e+00	818.00
IUUC-Apl-004219	Anas platyrhynchos	62.61	9.00e-163	566.00
IUUC-Aca-005197	Anolis carolinensis	58.59	8.00e-173	599.00
IUUC-Ame-011000	Astyanax mexicanus	56.08	3.00e-157	547.00
IUUC-Bta-012706	Bos taurus	89.31	0.00e+00	885.00
IUUC-Cja-019185	Callithrix jacchus	91.79	0.00e+00	886.00
IUUC-Cfa-021274	Canis familiaris	89.85	0.00e+00	881.00
IUUC-Cpo-022351	Cavia porcellus	84.23	0.00e+00	864.00
IUUC-Csa-023032	Chlorocebus sabaeus	92.26	0.00e+00	885.00
IUUC-Cho-024508	Choloepus hoffmanni	79.27	0.00e+00	679.00
IUUC-Dre-028703	Danio rerio	56.93	1.00e-156	546.00
IUUC-Dno-028915	Dasypus novemcinctus	88.96	0.00e+00	839.00
IUUC-Dor-030306	Dipodomys ordii	74.61	0.00e+00	650.00
IUUC-Dme-032182	Drosophila melanogaster	45.51	1.00e-80	293.00
IUUC-Ete-032353	Echinops telfairi	73.22	0.00e+00	680.00
IUUC-Eca-034136	Equus caballus	90.56	0.00e+00	828.00
IUUC-Eeu-034611	Erinaceus europaeus	79.07	0.00e+00	627.00
IUUC-Fca-036205	Felis catus	88.30	0.00e+00	775.00
IUUC-Fal-036947	Ficedula albicollis	54.12	9.00e-140	489.00
IUUC-Gga-040847	Gallus gallus	60.17	6.00e-164	570.00
IUUC-Ggo-045194	Gorilla gorilla	98.12	0.00e+00	972.00
IUUC-Hsa-047026	Homo sapiens	98.12	0.00e+00	971.00
IUUC-Itr-048943	Ictidomys tridecemlineatus	87.44	0.00e+00	828.00
IUUC-Lch-050067	Latimeria chalumnae	59.71	4.00e-174	604.00
IUUC-Loc-052409	Lepisosteus oculatus	58.05	4.00e-164	570.00
IUUC-Laf-053428	Loxodonta africana	89.43	0.00e+00	856.00
IUUC-Mcc-054772	Macaca mulatta	97.91	0.00e+00	966.00
IUUC-Meu-056496	Macropus eugenii	73.46	3.00e-165	574.00
IUUC-Mga-059276	Meleagris gallopavo	60.76	1.00e-167	582.00
IUUC-Mmr-061525	Microcebus murinus	91.00	0.00e+00	905.00
IUUC-Mdo-062351	Monodelphis domestica	69.61	0.00e+00	720.00
IUUC-Mmu-063834	Mus musculus	82.01	0.00e+00	830.00
IUUC-Mpu-066453	Mustela putorius furo	86.40	0.00e+00	848.00
IUUC-Mlu-067909	Myotis lucifugus	87.64	0.00e+00	801.00
IUUC-Opr-070566	Ochotona princeps	77.80	0.00e+00	755.00
IUUC-Oan-073726	Ornithorhynchus anatinus	67.05	1.00e-173	602.00
IUUC-Ocu-074639	Oryctolagus cuniculus	91.42	0.00e+00	915.00
IUUC-Ola-086913	Oryzias latipes	52.95	2.00e-147	515.00
IUUC-Oga-088061	Otolemur garnettii	91.62	0.00e+00	678.00
IUUC-Oar-090228	Ovis aries	84.16	0.00e+00	879.00
IUUC-Ptr-091420	Pan troglodytes	98.33	0.00e+00	974.00
IUUC-Pan-092228	Papio anubis	97.70	0.00e+00	965.00
IUUC-Psi-093309	Pelodiscus sinensis	62.45	7.00e-170	590.00
IUUC-Pab-098109	Pongo abelii	98.33	0.00e+00	973.00
IUUC-Pca-101012	Procavia capensis	68.20	0.00e+00	633.00
IUUC-Pva-102712	Pteropus vampyrus	89.54	0.00e+00	884.00
IUUC-Rno-105260	Rattus norvegicus	80.75	0.00e+00	824.00
IUUC-Sar-113446	Sorex araneus	76.99	0.00e+00	766.00
IUUC-Ssc-115794	Sus scrofa	90.88	0.00e+00	715.00
IUUC-Tgu-116770	Taeniopygia guttata	54.79	2.00e-142	498.00
IUUC-Tru-117968	Takifugu rubripes	55.02	2.00e-150	525.00
IUUC-Tsy-119316	Tarsius syrichta	78.60	0.00e+00	714.00
IUUC-Tbe-128071	Tupaia belangeri	87.79	0.00e+00	778.00
IUUC-Ttr-129267	Tursiops truncatus	89.33	0.00e+00	882.00
IUUC-Vpa-130823	Vicugna pacos	82.24	2.00e-176	612.00
IUUC-Xtr-131768	Xenopus tropicalis	59.11	8.00e-167	579.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence