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Tag Content
UUCD2 ID IUUC-Xtr-131768
UUCD1 version UUC-XeT-00553
Ensembl Protein ID ENSXETP00000047331.3
UniProt Accession F6ZT52; Q6DIJ0; POC1B_XENTR
Genbank Protein ID AAH75548.1
Protein Name POC1 centriolar protein homolog B; WD repeat-containing protein 51B; WD40 repeat protein Pix1
Genbank Nucleotide ID CU024965
Gene Name poc1b; wdr51b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000021865.3 ENSXETT00000047331.3 ENSXETP00000047331.3
ENSXETG00000021865.3 ENSXETT00000064417.1 ENSXETP00000060038.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.70e-54 179.5 143 178
UBD/Beta-Prp 1.20e-94 317.0 98 319
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
    Ht++v+c +f +d +l++s+sdD+t+++WD++ +
   Q: 143 HTNWVRCARFsPDgRLIASCSDDKTVRIWDITNRLC 178
    ***********999****************986655 PP
   


   UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
    l+ h+a v++v+fs+dg +++t+s+D+ ik w+l +++l++h++ v++ +fsp+g ++s s+d+t+r+wd+ ++ c++ t+
   Q: 98 LKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNRLCIN-TFVDY 185
    678********************************************************************************.***** PP
   S: 137 dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
    +g n+v ++p g +++s++ D+tv++Wd++t+kll++ + h+ v+slsf+++g++l+++s+dgtvk+ dl +g+ ++tl+gh+ +v
   Q: 186 KGHSNYVDFNPMGTCVASAGVDSTVKVWDIRTNKLLQHYQV-HNAGVNSLSFHPSGNYLLTASNDGTVKILDLLEGRLIYTLHGHQGPV 273
    ****************************************8.*********************************************** PP
   S: 226 ksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhnssvis 269
    +sv+fs+ ++ ++sg+ D ++ +W + ++ ++ ++l++++ +
   Q: 274 LSVAFSKSGDQFASGATDAQVLVWktNFDKYNIKEIVKLQQKRTCP 319
    **************************99999999999998866544 PP
   

Organism Xenopus tropicalis
Functional Description
(View)

Functional Description



     Plays an important role in centriole assembly and/or stability and ciliogenesis. Involved in early steps of centriole duplication, as well as in the later steps of centriole length control.
Plays an important role in centriole assembly and/or stability and ciliogenesis. Involved in early steps of centriole duplication, as well as in the later steps of centriole length control.
Protein Sequence
(Fasta)
MASALEDPAL QRHFKGHKDA VTYVDFSPDG KQLASSSADA CVMIWNFKPQ SRAYKYPGHK 60
EAVTCVQFSP SGHLVASSSK DRTVRLWAPN IKGESSVLKA HTAVVRCVNF SSDGHTFITA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Xtr-131768|E3,WD_repeat;UBD,Beta-Prp|Xenopus tropicalis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGATCTGCG GGTAACGTGT TTGTTTTTGC TGTCAGATTT CCTGAAACGC TTCATGCCGA 60
ATAGGGGATT CTGCTACCTG TTGTGAGTCT ATGGCGTCTG CATTGGTGAG ACCTGCATTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Xtr-131768|E3,WD_repeat;UBD,Beta-Prp|Xenopus tropicalis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0970--Cilium biogenesis/degradation
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0060271--P:cilium assembly
GO:0060287--P:epithelial cilium movement involved in determination of left/right asymmetry
GO:0007507--P:heart development
GO:0007634--P:optokinetic behavior
GO:0003014--P:renal system process
GO:0010842--P:retina layer formation

KEGG xtr:448445
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002219 Ailuropoda melanoleuca 57.60 3.00e-151 528.00
IUUC-Apl-004219 Anas platyrhynchos 60.78 9.00e-157 546.00
IUUC-Aca-005197 Anolis carolinensis 56.51 1.00e-160 559.00
IUUC-Ame-011000 Astyanax mexicanus 57.26 2.00e-167 581.00
IUUC-Bta-012706 Bos taurus 58.05 6.00e-166 577.00
IUUC-Cja-019185 Callithrix jacchus 54.62 1.00e-149 522.00
IUUC-Cfa-021274 Canis familiaris 58.80 6.00e-164 570.00
IUUC-Cpo-022351 Cavia porcellus 57.81 3.00e-163 568.00
IUUC-Csa-023032 Chlorocebus sabaeus 56.99 7.00e-156 543.00
IUUC-Cho-024508 Choloepus hoffmanni 50.97 9.00e-118 416.00
IUUC-Dre-028703 Danio rerio 55.77 2.00e-159 555.00
IUUC-Dno-028915 Dasypus novemcinctus 57.98 2.00e-155 541.00
IUUC-Dme-032182 Drosophila melanogaster 45.63 1.00e-85 310.00
IUUC-Ete-032353 Echinops telfairi 56.98 1.00e-116 413.00
IUUC-Eca-034136 Equus caballus 58.86 9.00e-155 539.00
IUUC-Gga-040847 Gallus gallus 59.49 6.00e-162 563.00
IUUC-Ggo-045194 Gorilla gorilla 58.26 2.00e-165 575.00
IUUC-Hsa-047026 Homo sapiens 58.47 5.00e-166 577.00
IUUC-Itr-048943 Ictidomys tridecemlineatus 57.37 2.00e-151 528.00
IUUC-Lch-050067 Latimeria chalumnae 62.76 0.00e+00 630.00
IUUC-Loc-052409 Lepisosteus oculatus 61.57 1.00e-174 605.00
IUUC-Laf-053428 Loxodonta africana 59.96 5.00e-166 577.00
IUUC-Mcc-054772 Macaca mulatta 58.69 4.00e-166 577.00
IUUC-Meu-056496 Macropus eugenii 58.24 3.00e-124 438.00
IUUC-Mga-059276 Meleagris gallopavo 57.47 1.00e-158 553.00
IUUC-Mmr-061525 Microcebus murinus 58.14 6.00e-166 577.00
IUUC-Mdo-062351 Monodelphis domestica 55.64 2.00e-157 548.00
IUUC-Mmu-063834 Mus musculus 56.48 3.00e-157 547.00
IUUC-Mpu-066453 Mustela putorius furo 59.20 2.00e-163 568.00
IUUC-Mlu-067909 Myotis lucifugus 57.63 3.00e-152 531.00
IUUC-Nle-069206 Nomascus leucogenys 59.11 8.00e-167 579.00
IUUC-Opr-070566 Ochotona princeps 50.43 2.00e-132 465.00
IUUC-Oan-073726 Ornithorhynchus anatinus 60.42 2.00e-153 535.00
IUUC-Ocu-074639 Oryctolagus cuniculus 58.77 7.00e-167 580.00
IUUC-Ola-086913 Oryzias latipes 54.56 3.00e-151 527.00
IUUC-Oga-088061 Otolemur garnettii 65.90 5.00e-143 499.00
IUUC-Oar-090228 Ovis aries 55.42 2.00e-163 568.00
IUUC-Ptr-091420 Pan troglodytes 58.47 5.00e-166 577.00
IUUC-Pan-092228 Papio anubis 58.47 1.00e-165 575.00
IUUC-Psi-093309 Pelodiscus sinensis 60.60 3.00e-163 567.00
IUUC-Pfo-096741 Poecilia formosa 58.81 2.00e-169 588.00
IUUC-Pab-098109 Pongo abelii 58.47 9.00e-166 576.00
IUUC-Pva-102712 Pteropus vampyrus 60.08 3.00e-169 587.00
IUUC-Rno-105260 Rattus norvegicus 56.78 9.00e-159 553.00
IUUC-Sar-113446 Sorex araneus 53.18 5.00e-144 503.00
IUUC-Ssc-115794 Sus scrofa 65.11 8.00e-151 526.00
IUUC-Tgu-116770 Taeniopygia guttata 50.64 1.00e-134 473.00
IUUC-Tru-117968 Takifugu rubripes 55.01 1.00e-147 515.00
IUUC-Tni-119953 Tetraodon nigroviridis 51.44 1.00e-137 483.00
IUUC-Tbe-128071 Tupaia belangeri 53.55 2.00e-135 475.00
IUUC-Ttr-129267 Tursiops truncatus 59.53 7.00e-168 583.00
IUUC-Vpa-130823 Vicugna pacos 57.38 1.00e-122 433.00
Created Date 25-Jun-2017

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