iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012595

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02043390

Gene Name

RFWD2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000031385.3	ENSBTAT00000044452.3	ENSBTAP00000041946.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-06	28.2	140	178
E3 adaptor/Cullin RING/DCX/DWD	6.60e-24	83.1	474	503

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++++++  + + CgH f+ +C+++          + rCP C+
   Q: 140  CPICFDMIEE-AYMTKCGHSFCYKCIHQS------LEDNNRCPKCN 178
           ********99.888***********9555......999999****6 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWD 29
           +++++c+++     +ll+s+ + gt+ +WD
   Q: 474  NSKISCISWssYHkNLLASSDYEGTVILWD 503
           689******9622599************** PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MSGSRQAGSG SAGTSPGSSA ASSVTSASSS LSSSPSPPSV AASAAALGSG GEDQDADSGG 60
LGGPARPVLV AAAVSGSGGG SGGGAVSAGL SRLSCAARPS AGVGGSSSSL SSGSRKRPPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGGCGGC GGCGGCGGCG GCGGCGGGTC GCGGTCGCGG TCGCGGTCCC TCTCCTCCGA 60
GCTCCCAGCC GGAGGGGAGG GAGTCACGAT GTCTGGGAGC CGCCAGGCCG GATCGGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0010212--P:response to ionizing radiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	40.09	2.00e-126	446.00
IUUC-Aml-001265	Ailuropoda melanoleuca	99.84	0.00e+00	1249.00
IUUC-Atr-002460	Amborella trichopoda	38.83	4.00e-125	441.00
IUUC-Apl-003796	Anas platyrhynchos	98.28	0.00e+00	1160.00
IUUC-Aca-005078	Anolis carolinensis	97.58	0.00e+00	1212.00
IUUC-Aly-006014	Arabidopsis lyrata	40.09	1.00e-130	459.00
IUUC-Ath-007636	Arabidopsis thaliana	39.94	2.00e-130	459.00
IUUC-Ame-011176	Astyanax mexicanus	75.27	1.00e-69	257.00
IUUC-Bdi-014152	Brachypodium distachyon	39.14	2.00e-129	456.00
IUUC-Bol-016380	Brassica oleracea	40.36	1.00e-131	463.00
IUUC-Bra-017690	Brassica rapa	39.24	3.00e-126	445.00
IUUC-Cja-018926	Callithrix jacchus	99.22	0.00e+00	1259.00
IUUC-Cfa-021088	Canis familiaris	99.07	0.00e+00	1262.00
IUUC-Cpo-022442	Cavia porcellus	98.26	0.00e+00	1225.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.45	3.00e-33	135.00
IUUC-Csa-024119	Chlorocebus sabaeus	97.54	0.00e+00	1248.00
IUUC-Cho-024883	Choloepus hoffmanni	66.56	2.00e-106	379.00
IUUC-Cin-025375	Ciona intestinalis	55.56	0.00e+00	681.00
IUUC-Cme-027350	Cyanidioschyzon merolae	41.62	1.00e-79	291.00
IUUC-Dre-028453	Danio rerio	87.88	0.00e+00	1086.00
IUUC-Dno-029887	Dasypus novemcinctus	98.75	0.00e+00	1251.00
IUUC-Dor-031110	Dipodomys ordii	80.35	0.00e+00	927.00
IUUC-Ete-033016	Echinops telfairi	84.50	0.00e+00	1043.00
IUUC-Eca-034403	Equus caballus	99.31	0.00e+00	1161.00
IUUC-Eeu-034690	Erinaceus europaeus	82.35	0.00e+00	964.00
IUUC-Fca-036475	Felis catus	98.97	0.00e+00	1165.00
IUUC-Fal-037189	Ficedula albicollis	98.83	0.00e+00	1195.00
IUUC-Gmo-039245	Gadus morhua	86.95	0.00e+00	1059.00
IUUC-Gga-040806	Gallus gallus	98.39	0.00e+00	1240.00
IUUC-Gac-042177	Gasterosteus aculeatus	88.83	0.00e+00	1105.00
IUUC-Gma-044187	Glycine max	40.64	2.00e-127	449.00
IUUC-Ggo-044430	Gorilla gorilla	98.52	0.00e+00	931.00
IUUC-Hsa-045853	Homo sapiens	99.22	0.00e+00	1259.00
IUUC-Hvu-047750	Hordeum vulgare	38.97	4.00e-95	343.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	100.00	7.00e-145	505.00
IUUC-Lch-050420	Latimeria chalumnae	92.20	0.00e+00	1153.00
IUUC-Lpe-051219	Leersia perrieri	38.82	3.00e-124	439.00
IUUC-Loc-052728	Lepisosteus oculatus	91.61	0.00e+00	1110.00
IUUC-Laf-053775	Loxodonta africana	98.28	0.00e+00	1255.00
IUUC-Meu-056595	Macropus eugenii	77.93	1.00e-177	616.00
IUUC-Mtr-058555	Medicago truncatula	40.45	5.00e-134	471.00
IUUC-Mga-059646	Meleagris gallopavo	97.94	0.00e+00	1157.00
IUUC-Mmr-060990	Microcebus murinus	99.22	0.00e+00	1258.00
IUUC-Mdo-062287	Monodelphis domestica	99.03	0.00e+00	1249.00
IUUC-Mmu-064097	Mus musculus	98.91	0.00e+00	1263.00
IUUC-Mac-065240	Musa acuminata	41.37	3.00e-136	478.00
IUUC-Mpu-066612	Mustela putorius furo	98.97	0.00e+00	1168.00
IUUC-Mlu-067967	Myotis lucifugus	97.15	0.00e+00	1169.00
IUUC-Nle-069543	Nomascus leucogenys	99.38	0.00e+00	1263.00
IUUC-Opr-070366	Ochotona princeps	83.88	0.00e+00	716.00
IUUC-Ont-071522	Oreochromis niloticus	88.35	0.00e+00	1092.00
IUUC-Oan-073409	Ornithorhynchus anatinus	98.80	0.00e+00	1162.00
IUUC-Ocu-073756	Oryctolagus cuniculus	99.04	0.00e+00	1231.00
IUUC-Oba-075149	Oryza barthii	39.23	5.00e-127	449.00
IUUC-Obr-076563	Oryza brachyantha	39.48	2.00e-127	449.00
IUUC-Ogl-077701	Oryza glaberrima	39.26	1.00e-127	450.00
IUUC-Ogu-078383	Oryza glumaepatula	39.26	1.00e-127	450.00
IUUC-Oin-079965	Oryza indica	37.05	7.00e-114	404.00
IUUC-Olo-080639	Oryza longistaminata	38.80	2.00e-125	442.00
IUUC-Ome-081821	Oryza meridionalis	38.54	1.00e-115	410.00
IUUC-Oni-082622	Oryza nivara	39.26	1.00e-127	450.00
IUUC-Opu-083295	Oryza punctata	38.96	2.00e-127	449.00
IUUC-Oru-084661	Oryza rufipogon	39.26	1.00e-127	450.00
IUUC-Osa-085766	Oryza sativa	39.26	1.00e-127	450.00
IUUC-Ola-086727	Oryzias latipes	87.98	0.00e+00	1112.00
IUUC-Olu-087702	Ostreococcus lucimarinus	42.99	3.00e-69	254.00
IUUC-Oga-088215	Otolemur garnettii	97.36	0.00e+00	1236.00
IUUC-Oar-089880	Ovis aries	99.68	0.00e+00	1233.00
IUUC-Ptr-090597	Pan troglodytes	99.22	0.00e+00	1259.00
IUUC-Pan-091987	Papio anubis	99.38	0.00e+00	1262.00
IUUC-Psi-094033	Pelodiscus sinensis	98.31	0.00e+00	1170.00
IUUC-Pma-094587	Petromyzon marinus	70.32	0.00e+00	804.00
IUUC-Ppa-095256	Physcomitrella patens	39.73	4.00e-133	468.00
IUUC-Pfo-097388	Poecilia formosa	87.50	0.00e+00	1072.00
IUUC-Pab-098029	Pongo abelii	99.22	0.00e+00	1259.00
IUUC-Pop-099319	Populus trichocarpa	39.23	5.00e-131	461.00
IUUC-Pca-100846	Procavia capensis	90.80	0.00e+00	1144.00
IUUC-Ppe-101250	Prunus persica	38.60	5.00e-121	428.00
IUUC-Pva-102407	Pteropus vampyrus	98.91	0.00e+00	1251.00
IUUC-Rno-105312	Rattus norvegicus	98.91	0.00e+00	1260.00
IUUC-Sha-106514	Sarcophilus harrisii	98.92	0.00e+00	776.00
IUUC-Smo-109418	Selaginella moellendorffii	39.94	3.00e-130	459.00
IUUC-Sit-110248	Setaria italica	38.92	2.00e-128	453.00
IUUC-Sly-110964	Solanum lycopersicum	40.55	9.00e-132	464.00
IUUC-Stu-112882	Solanum tuberosum	40.80	5.00e-133	468.00
IUUC-Sar-113230	Sorex araneus	72.20	0.00e+00	803.00
IUUC-Sbi-113962	Sorghum bicolor	37.04	2.00e-123	436.00
IUUC-Ssc-115987	Sus scrofa	99.11	0.00e+00	625.00
IUUC-Tgu-116471	Taeniopygia guttata	98.38	0.00e+00	1233.00
IUUC-Tru-118231	Takifugu rubripes	87.68	0.00e+00	1057.00
IUUC-Tsy-119415	Tarsius syrichta	98.99	0.00e+00	1175.00
IUUC-Tni-120893	Tetraodon nigroviridis	87.84	0.00e+00	1065.00
IUUC-Tca-121703	Theobroma cacao	41.27	5.00e-130	458.00
IUUC-Tae-125317	Triticum aestivum	41.14	2.00e-134	473.00
IUUC-Tur-126557	Triticum urartu	40.78	2.00e-129	456.00
IUUC-Tbe-127253	Tupaia belangeri	71.16	0.00e+00	849.00
IUUC-Ttr-129100	Tursiops truncatus	97.65	0.00e+00	1144.00
IUUC-Vpa-130613	Vicugna pacos	92.94	0.00e+00	1100.00
IUUC-Vvi-130880	Vitis vinifera	41.13	9.00e-124	437.00
IUUC-Xtr-132033	Xenopus tropicalis	95.65	0.00e+00	1236.00
IUUC-Xma-133421	Xiphophorus maculatus	87.34	0.00e+00	1071.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence