iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098819

Ensembl Protein ID

POPTR_0001s16980.1

UniProt Accession

B9GKV2; B9GKV2_POPTR

Genbank Protein ID

EEE84398.2

Protein Name

Ubiquitin-like protein ATG12

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s16980g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s16980	POPTR_0001s16980.1	POPTR_0001s16980.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG12	39.58	8.00e-16	79.30	IUUC-Hsa-046903

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Functional Description
(View)

Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.

Protein Sequence
(Fasta)

MEIESQDSAR KVIIQLKATA DAPILKQKKF KMLGTDKFAK VIDFLRRQIH RETVFVYINS 60
AFSPNPDELV IDLFNNFGVD GKLLVNYACS VAWG 94

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Nucleotide Sequence
(Fasta)

AGCAAAACCT TTCGTGGACG TATCAAAATC CCTGACTTGT ATGTTTCAAC TCTTGTAGCT 60
TTCAAATTCT AAGCTCATAG CAACATGGAG ATTGAATCAC AGGATTCTGC TCGAAAAGGT 120

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Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR007242--Atg12
IPR029071--Ubiquitin-rel_dom

Pfam

PF04110--APG12

Gene Ontology

GO:0034274--C:Atg12-Atg5-Atg16 complex
GO:0034045--C:pre-autophagosomal structure membrane
GO:0019776--F:Atg8 ligase activity
GO:0000045--P:autophagosome assembly
GO:0006501--P:C-terminal protein lipidation
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy

KEGG

pop:POPTR_0001s16980g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001177	Aegilops tauschii	58.70	2.00e-33	132.00
IUUC-Aml-002116	Ailuropoda melanoleuca	38.54	1.00e-16	78.60
IUUC-Atr-002615	Amborella trichopoda	75.53	3.00e-41	158.00
IUUC-Apl-003753	Anas platyrhynchos	47.50	2.00e-08	49.70
IUUC-Aca-005231	Anolis carolinensis	36.46	4.00e-13	66.60
IUUC-Aly-006172	Arabidopsis lyrata	72.34	6.00e-39	150.00
IUUC-Ath-006953	Arabidopsis thaliana	69.15	1.00e-38	150.00
IUUC-Ago-007970	Ashbya gossypii	37.21	5.00e-05	40.40
IUUC-Acl-008072	Aspergillus clavatus	37.50	2.00e-13	67.40
IUUC-Afl-008725	Aspergillus flavus	41.38	4.00e-14	70.50
IUUC-Afu-008967	Aspergillus fumigatus	37.93	1.00e-12	65.50
IUUC-Ani-009248	Aspergillus nidulans	37.93	1.00e-12	65.50
IUUC-Ang-009684	Aspergillus niger	37.21	5.00e-12	63.20
IUUC-Aor-009947	Aspergillus oryzae	41.38	4.00e-14	70.50
IUUC-Ame-011656	Astyanax mexicanus	37.36	6.00e-14	68.90
IUUC-Bgr-012174	Blumeria graminis	35.96	7.00e-10	55.80
IUUC-Bta-012483	Bos taurus	40.66	6.00e-17	79.00
IUUC-Bci-013755	Botrytis cinerea	33.33	2.00e-09	53.90
IUUC-Bdi-014156	Brachypodium distachyon	69.41	1.00e-34	136.00
IUUC-Bol-015683	Brassica oleracea	70.97	4.00e-37	145.00
IUUC-Bra-016802	Brassica rapa	73.56	6.00e-38	147.00
IUUC-Cel-018242	Caenorhabditis elegans	34.07	4.00e-08	49.30
IUUC-Cja-019514	Callithrix jacchus	39.58	1.00e-16	79.00
IUUC-Cfa-020748	Canis familiaris	38.54	1.00e-16	78.60
IUUC-Cpo-021965	Cavia porcellus	38.54	1.00e-16	78.60
IUUC-Cre-023009	Chlamydomonas reinhardtii	41.67	2.00e-16	76.30
IUUC-Csa-023494	Chlorocebus sabaeus	39.58	5.00e-17	79.30
IUUC-Cho-024631	Choloepus hoffmanni	40.66	1.00e-16	78.60
IUUC-Cin-025609	Ciona intestinalis	39.56	3.00e-15	72.40
IUUC-Cgl-026722	Colletotrichum gloeosporioides	34.07	7.00e-11	59.30
IUUC-Dre-027479	Danio rerio	39.36	1.00e-15	74.30
IUUC-Dno-029693	Dasypus novemcinctus	36.26	6.00e-12	62.40
IUUC-Dse-031440	Dothistroma septosporum	37.93	3.00e-13	67.00
IUUC-Dme-031892	Drosophila melanogaster	31.18	2.00e-11	59.70
IUUC-Ete-032550	Echinops telfairi	41.67	2.00e-15	73.60
IUUC-Eca-033553	Equus caballus	39.58	5.00e-17	79.30
IUUC-Fca-036524	Felis catus	38.95	8.00e-17	79.00
IUUC-Fal-036942	Ficedula albicollis	37.21	1.00e-14	70.50
IUUC-Fox-037753	Fusarium oxysporum	36.67	6.00e-12	62.80
IUUC-Gmo-039498	Gadus morhua	39.56	5.00e-15	72.40
IUUC-Ggr-039852	Gaeumannomyces graminis	37.08	5.00e-10	57.00
IUUC-Gga-041263	Gallus gallus	37.50	4.00e-16	76.30
IUUC-Gac-042346	Gasterosteus aculeatus	41.46	1.00e-13	67.80
IUUC-Gma-042896	Glycine max	78.72	1.00e-42	163.00
IUUC-Ggo-045601	Gorilla gorilla	39.58	9.00e-17	79.30
IUUC-Hsa-046903	Homo sapiens	39.58	5.00e-17	79.30
IUUC-Hvu-047239	Hordeum vulgare	60.87	6.00e-34	134.00
IUUC-Itr-048445	Ictidomys tridecemlineatus	40.62	3.00e-17	80.50
IUUC-Kpa-049355	Komagataella pastoris	31.25	3.00e-10	56.60
IUUC-Lch-050619	Latimeria chalumnae	37.50	1.00e-14	71.60
IUUC-Loc-052102	Lepisosteus oculatus	45.83	8.00e-03	30.80
IUUC-Lma-053299	Leptosphaeria maculans	31.94	5.00e-07	45.80
IUUC-Laf-054205	Loxodonta africana	39.58	4.00e-17	79.70
IUUC-Meu-056804	Macropus eugenii	39.56	1.00e-16	78.20
IUUC-Mor-057052	Magnaporthe oryzae	35.56	8.00e-10	55.80
IUUC-Mtr-057961	Medicago truncatula	79.12	3.00e-42	162.00
IUUC-Mla-059045	Melampsora laricipopulina	47.13	1.00e-21	94.00
IUUC-Mvi-060360	Microbotryum violaceum	47.13	6.00e-21	92.00
IUUC-Mmr-061654	Microcebus murinus	40.66	4.00e-17	79.30
IUUC-Mdo-062649	Monodelphis domestica	40.66	7.00e-17	79.00
IUUC-Mmu-064105	Mus musculus	40.66	6.00e-17	79.00
IUUC-Mac-065532	Musa acuminata	73.40	6.00e-40	154.00
IUUC-Mpu-066269	Mustela putorius furo	38.54	7.00e-17	79.00
IUUC-Mlu-067631	Myotis lucifugus	39.18	8.00e-17	79.00
IUUC-Nfi-068468	Neosartorya fischeri	36.46	4.00e-13	65.90
IUUC-Ncr-068750	Neurospora crassa	34.09	2.00e-10	57.80
IUUC-Nle-069483	Nomascus leucogenys	39.58	1.00e-16	79.00
IUUC-Opr-070936	Ochotona princeps	39.58	2.00e-16	77.80
IUUC-Obr-076322	Oryza brachyantha	67.06	1.00e-34	136.00
IUUC-Ogl-077226	Oryza glaberrima	68.75	1.00e-32	130.00
IUUC-Oin-079220	Oryza indica	75.41	2.00e-26	109.00
IUUC-Olo-080688	Oryza longistaminata	68.75	1.00e-32	130.00
IUUC-Ome-081265	Oryza meridionalis	68.75	1.00e-32	130.00
IUUC-Oru-084342	Oryza rufipogon	67.06	3.00e-34	137.00
IUUC-Osa-086212	Oryza sativa	68.75	1.00e-32	130.00
IUUC-Ola-087277	Oryzias latipes	37.63	1.00e-14	70.50
IUUC-Olu-087780	Ostreococcus lucimarinus	38.04	7.00e-15	71.20
IUUC-Oga-088175	Otolemur garnettii	40.66	5.00e-17	79.30
IUUC-Oar-089477	Ovis aries	40.66	1.00e-16	78.60
IUUC-Ptr-091129	Pan troglodytes	39.58	9.00e-17	79.30
IUUC-Psi-093351	Pelodiscus sinensis	38.54	4.00e-17	80.10
IUUC-Pno-094948	Phaeosphaeria nodorum	32.89	1.00e-07	47.80
IUUC-Ppa-095788	Physcomitrella patens	69.89	2.00e-37	145.00
IUUC-Pfo-096993	Poecilia formosa	34.41	8.00e-13	65.10
IUUC-Pab-098502	Pongo abelii	39.58	8.00e-17	79.30
IUUC-Pca-100144	Procavia capensis	30.21	1.00e-06	45.40
IUUC-Ppe-101560	Prunus persica	80.49	6.00e-39	150.00
IUUC-Pva-102810	Pteropus vampyrus	35.06	4.00e-09	53.50
IUUC-Pgr-103531	Puccinia graminis	48.91	9.00e-23	97.80
IUUC-Ptt-103753	Puccinia triticina	47.83	4.00e-22	95.50
IUUC-Pyt-104733	Pyrenophora triticirepentis	40.70	5.00e-13	66.20
IUUC-Rno-106072	Rattus norvegicus	42.86	1.00e-17	81.30
IUUC-Sce-106275	Saccharomyces cerevisiae	32.94	5.00e-10	56.60
IUUC-Sha-107554	Sarcophilus harrisii	38.54	1.00e-16	78.20
IUUC-Sja-107682	Schizosaccharomyces japonicus	34.48	3.00e-12	63.20
IUUC-Spo-108275	Schizosaccharomyces pombe	36.36	4.00e-16	76.30
IUUC-Smo-109151	Selaginella moellendorffii	54.65	2.00e-23	99.80
IUUC-Sit-110270	Setaria italica	72.94	3.00e-36	142.00
IUUC-Sly-111862	Solanum lycopersicum	81.40	1.00e-40	156.00
IUUC-Stu-112663	Solanum tuberosum	81.82	4.00e-19	85.50
IUUC-Sbi-114148	Sorghum bicolor	72.94	3.00e-36	142.00
IUUC-Sre-115216	Sporisorium reilianum	39.58	5.00e-19	85.90
IUUC-Ssc-116051	Sus scrofa	39.58	5.00e-17	79.30
IUUC-Tgu-117008	Taeniopygia guttata	29.27	3.70e-02	29.30
IUUC-Tru-118466	Takifugu rubripes	41.46	7.00e-14	67.80
IUUC-Tsy-119334	Tarsius syrichta	39.58	4.00e-13	67.00
IUUC-Tni-119792	Tetraodon nigroviridis	41.46	3.00e-14	68.90
IUUC-Tca-121861	Theobroma cacao	77.66	2.00e-42	162.00
IUUC-Tvi-122499	Trichoderma virens	37.50	5.00e-12	62.40
IUUC-Tae-123431	Triticum aestivum	58.70	2.00e-33	132.00
IUUC-Tme-126934	Tuber melanosporum	35.87	2.00e-11	61.20
IUUC-Ttr-129001	Tursiops truncatus	35.79	3.00e-12	63.90
IUUC-Uma-129324	Ustilago maydis	38.54	1.00e-18	84.70
IUUC-Vda-129846	Verticillium dahliae	32.95	4.00e-10	56.60
IUUC-Vpa-130202	Vicugna pacos	50.00	4.00e-09	53.90
IUUC-Vvi-131474	Vitis vinifera	76.62	4.00e-32	129.00
IUUC-Xtr-132782	Xenopus tropicalis	38.46	3.00e-16	77.00
IUUC-Xma-134140	Xiphophorus maculatus	35.48	2.00e-13	67.40
IUUC-Yli-134517	Yarrowia lipolytica	36.36	9.00e-10	56.20
IUUC-Zma-134764	Zea mays	68.89	2.00e-36	142.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence