iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028701

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 55b

Genbank Nucleotide ID

CR354424

Gene Name

trim55b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000058158.4	ENSDART00000080969.3	ENSDARP00000075413.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-09	37.7	10	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw..........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C + +           g +  s ++frCP Cr
   Q: 10   CPICLEMFTKPVVILPCQHNLCRKCANDIfqssnpylpiRGGSVTSGGRFRCPSCR 65
           *************************86667777888*99888889**********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MDSLEKQLIC PICLEMFTKP VVILPCQHNL CRKCANDIFQ SSNPYLPIRG GSVTSGGRFR 60
CPSCRHEVVL DRHGVYGLQR NLLVENIIDM YKQEYISSRP SPERKVDQPM CEVHEDEKIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAACATGG CAACCTCTGA CGTGCTGCTT TCTAAAAACA GAGCTGTCTG ATAGTGGGCC 60
TTGGCGTGCG GGAATGCCAG TCTCATTACA GAGGGTACAG ACAAGCGCTT GGGCCTGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

dre:664753

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	70.22	2.00e-136	479.00
IUUC-Apl-003341	Anas platyrhynchos	71.38	4.00e-137	481.00
IUUC-Aca-005384	Anolis carolinensis	72.70	6.00e-135	474.00
IUUC-Ame-010720	Astyanax mexicanus	82.54	5.00e-163	566.00
IUUC-Bta-013040	Bos taurus	70.22	6.00e-136	477.00
IUUC-Cja-019932	Callithrix jacchus	71.20	5.00e-138	484.00
IUUC-Cfa-020450	Canis familiaris	70.89	2.00e-138	486.00
IUUC-Cpo-021767	Cavia porcellus	70.70	1.00e-137	483.00
IUUC-Csa-023600	Chlorocebus sabaeus	70.57	4.00e-135	474.00
IUUC-Cho-024753	Choloepus hoffmanni	67.09	6.00e-125	441.00
IUUC-Cin-025224	Ciona intestinalis	50.96	2.00e-92	332.00
IUUC-Csv-026374	Ciona savignyi	51.77	5.00e-83	300.00
IUUC-Dno-030008	Dasypus novemcinctus	69.59	8.00e-135	474.00
IUUC-Ete-032274	Echinops telfairi	63.61	1.00e-120	427.00
IUUC-Eca-034326	Equus caballus	70.57	5.00e-137	481.00
IUUC-Fca-035385	Felis catus	70.25	5.00e-126	444.00
IUUC-Fal-036679	Ficedula albicollis	72.52	8.00e-135	474.00
IUUC-Gmo-039021	Gadus morhua	70.79	4.00e-132	464.00
IUUC-Gga-040576	Gallus gallus	72.52	5.00e-134	471.00
IUUC-Gac-042165	Gasterosteus aculeatus	79.43	7.00e-156	543.00
IUUC-Ggo-044496	Gorilla gorilla	71.02	8.00e-137	480.00
IUUC-Hsa-046337	Homo sapiens	70.57	4.00e-137	481.00
IUUC-Lch-050504	Latimeria chalumnae	74.68	1.00e-144	506.00
IUUC-Loc-052717	Lepisosteus oculatus	78.34	4.00e-151	528.00
IUUC-Laf-053838	Loxodonta africana	71.07	4.00e-137	481.00
IUUC-Mcc-054690	Macaca mulatta	70.25	2.00e-136	479.00
IUUC-Mga-060112	Meleagris gallopavo	72.04	7.00e-133	467.00
IUUC-Mmr-061229	Microcebus murinus	68.67	2.00e-132	466.00
IUUC-Mdo-062397	Monodelphis domestica	72.47	1.00e-133	469.00
IUUC-Mmu-063764	Mus musculus	70.89	4.00e-137	481.00
IUUC-Mpu-066503	Mustela putorius furo	70.89	4.00e-138	484.00
IUUC-Nle-069170	Nomascus leucogenys	70.89	2.00e-137	482.00
IUUC-Ont-072082	Oreochromis niloticus	79.68	4.00e-156	544.00
IUUC-Oan-072715	Ornithorhynchus anatinus	72.47	9.00e-140	490.00
IUUC-Ocu-074747	Oryctolagus cuniculus	71.20	4.00e-138	484.00
IUUC-Ola-086630	Oryzias latipes	75.24	4.00e-137	480.00
IUUC-Oga-087995	Otolemur garnettii	69.94	1.00e-134	473.00
IUUC-Oar-089844	Ovis aries	70.22	6.00e-136	477.00
IUUC-Ptr-091556	Pan troglodytes	71.02	5.00e-137	481.00
IUUC-Pan-092224	Papio anubis	71.02	2.00e-136	479.00
IUUC-Psi-093856	Pelodiscus sinensis	72.78	1.00e-141	496.00
IUUC-Pma-094534	Petromyzon marinus	50.48	1.00e-92	332.00
IUUC-Pfo-096596	Poecilia formosa	74.47	6.00e-151	526.00
IUUC-Pab-098375	Pongo abelii	60.19	4.00e-107	381.00
IUUC-Pca-100510	Procavia capensis	70.97	4.00e-135	475.00
IUUC-Pva-102962	Pteropus vampyrus	69.94	4.00e-126	445.00
IUUC-Rno-105696	Rattus norvegicus	71.20	5.00e-138	484.00
IUUC-Sha-106825	Sarcophilus harrisii	73.10	2.00e-134	472.00
IUUC-Ssc-116332	Sus scrofa	70.89	2.00e-137	483.00
IUUC-Tgu-117208	Taeniopygia guttata	72.52	5.00e-135	474.00
IUUC-Tru-118744	Takifugu rubripes	77.96	4.00e-152	530.00
IUUC-Tsy-119352	Tarsius syrichta	70.89	2.00e-137	482.00
IUUC-Tni-120413	Tetraodon nigroviridis	78.41	8.00e-152	529.00
IUUC-Tme-126931	Tuber melanosporum	33.33	3.00e-09	56.60
IUUC-Tbe-127821	Tupaia belangeri	82.54	3.00e-94	339.00
IUUC-Ttr-128545	Tursiops truncatus	70.89	1.00e-137	483.00
IUUC-Vpa-130699	Vicugna pacos	71.84	4.00e-139	488.00
IUUC-Xtr-132207	Xenopus tropicalis	69.40	2.00e-135	475.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence