iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069170

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01083613

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000010586.2	ENSNLET00000013578.2	ENSNLEP00000012942.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-09	35.9	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTMASGGRFRCPSCR 82
           *************************744445557779999777778**********8 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MSASLNYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQASNP 60
YLPTRGGTTM ASGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESTRPEKKSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACTCATCT GAGGCTAAGC TGCCCATAGT TCGGGGAGAC CCACAGGGAA AACAAAACAA 60
GAAACAGAGA ACTTGCAAAC GGACGCTCAT TACTTGGAAC GTTTGCTCAA CCGAGGAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	89.49	0.00e+00	879.00
IUUC-Apl-003341	Anas platyrhynchos	89.70	0.00e+00	632.00
IUUC-Aca-005384	Anolis carolinensis	65.39	4.00e-179	620.00
IUUC-Ame-010720	Astyanax mexicanus	71.84	1.00e-139	489.00
IUUC-Bta-013040	Bos taurus	84.78	0.00e+00	830.00
IUUC-Cja-019932	Callithrix jacchus	95.06	0.00e+00	900.00
IUUC-Cfa-020450	Canis familiaris	89.45	0.00e+00	915.00
IUUC-Cpo-021767	Cavia porcellus	86.65	0.00e+00	868.00
IUUC-Csa-023600	Chlorocebus sabaeus	93.27	0.00e+00	901.00
IUUC-Cho-024753	Choloepus hoffmanni	74.59	0.00e+00	701.00
IUUC-Cgl-026521	Colletotrichum gloeosporioides	30.56	3.00e-08	54.30
IUUC-Dre-028701	Danio rerio	70.89	2.00e-137	481.00
IUUC-Dno-030008	Dasypus novemcinctus	82.71	0.00e+00	839.00
IUUC-Ete-032274	Echinops telfairi	79.71	0.00e+00	785.00
IUUC-Eca-034326	Equus caballus	88.16	0.00e+00	839.00
IUUC-Fca-035385	Felis catus	89.75	0.00e+00	825.00
IUUC-Fal-036679	Ficedula albicollis	89.21	3.00e-176	611.00
IUUC-Gmo-039021	Gadus morhua	64.87	1.00e-119	422.00
IUUC-Gga-040576	Gallus gallus	88.89	7.00e-174	603.00
IUUC-Gac-042165	Gasterosteus aculeatus	66.56	9.00e-133	466.00
IUUC-Ggo-044496	Gorilla gorilla	96.72	0.00e+00	898.00
IUUC-Hsa-046337	Homo sapiens	96.72	0.00e+00	895.00
IUUC-Lch-050504	Latimeria chalumnae	64.38	8.00e-179	620.00
IUUC-Loc-052717	Lepisosteus oculatus	54.11	1.00e-155	542.00
IUUC-Laf-053838	Loxodonta africana	79.85	0.00e+00	819.00
IUUC-Mcc-054690	Macaca mulatta	93.43	0.00e+00	884.00
IUUC-Meu-056782	Macropus eugenii	67.31	0.00e+00	638.00
IUUC-Mga-060112	Meleagris gallopavo	88.33	7.00e-173	600.00
IUUC-Mmr-061229	Microcebus murinus	88.89	0.00e+00	876.00
IUUC-Mdo-062397	Monodelphis domestica	74.77	0.00e+00	734.00
IUUC-Mmu-063764	Mus musculus	83.79	0.00e+00	827.00
IUUC-Mpu-066503	Mustela putorius furo	89.07	0.00e+00	865.00
IUUC-Mlu-068160	Myotis lucifugus	95.93	8.00e-99	352.00
IUUC-Ont-072082	Oreochromis niloticus	68.47	1.00e-132	465.00
IUUC-Oan-072715	Ornithorhynchus anatinus	72.05	0.00e+00	704.00
IUUC-Ocu-074747	Oryctolagus cuniculus	88.04	0.00e+00	783.00
IUUC-Ola-086646	Oryzias latipes	65.92	4.00e-128	451.00
IUUC-Oga-087995	Otolemur garnettii	89.29	0.00e+00	891.00
IUUC-Oar-089844	Ovis aries	85.14	0.00e+00	845.00
IUUC-Ptr-091556	Pan troglodytes	97.08	0.00e+00	895.00
IUUC-Pan-092224	Papio anubis	93.80	0.00e+00	885.00
IUUC-Psi-093856	Pelodiscus sinensis	70.47	0.00e+00	727.00
IUUC-Pma-094534	Petromyzon marinus	55.42	4.00e-100	357.00
IUUC-Pfo-096596	Poecilia formosa	61.83	2.00e-129	455.00
IUUC-Pca-100510	Procavia capensis	81.97	0.00e+00	813.00
IUUC-Pva-102962	Pteropus vampyrus	87.63	0.00e+00	786.00
IUUC-Rno-105696	Rattus norvegicus	82.33	0.00e+00	789.00
IUUC-Sha-106825	Sarcophilus harrisii	75.59	0.00e+00	745.00
IUUC-Ssc-116332	Sus scrofa	87.02	0.00e+00	819.00
IUUC-Tgu-117208	Taeniopygia guttata	88.89	1.00e-176	612.00
IUUC-Tru-118744	Takifugu rubripes	65.55	3.00e-131	461.00
IUUC-Tsy-119352	Tarsius syrichta	87.88	0.00e+00	885.00
IUUC-Tni-120413	Tetraodon nigroviridis	67.73	1.00e-129	455.00
IUUC-Tbe-127821	Tupaia belangeri	98.51	1.00e-121	430.00
IUUC-Ttr-128545	Tursiops truncatus	84.83	0.00e+00	795.00
IUUC-Vpa-130699	Vicugna pacos	97.26	0.00e+00	676.00
IUUC-Xtr-132207	Xenopus tropicalis	64.23	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence