iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA
Post-translational Modifications (PTMs)
CPLM	dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.10e-10	40.4	4	39
ULD/UDP/UFD/UBX	2.20e-18	66.6	250	326

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 7    leqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           ++ l++MGF+re++  aL+ + n+ +e A+e+Ll +
   Q: 4    VQTLMDMGFPRERVEYALEVTsNKGVEPAMEWLLAH 39
           89*******************************976 PP

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllv 79
           +++++++q+Rl dG++l+ +F+ +++l++++ f++ +++  ++pF+L+++fPr++++++++++ l+++gLvps+++++
   Q: 250  DYTETRIQVRLQDGSTLQETFNVKEQLSAVRVFIQ-MKTGIESPFSLMTTFPRKLFAEDDYEKPLEVLGLVPSAVITM 326
           56789******************************.***************************************987 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSEVQTLMDM GFPRERVEYA LEVTSNKGVE PAMEWLLAHV DDPIPSRQGA GESPGSTAQP 60
AAAVDSSAAA ASSSTSGAGE TSAPVAKSLK CDECGKVLRD HTEVEYHAAK TGHTKFSESE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCTATCGA TAGTTATCCA TCTCGCCTGG CTTTGTTTTT GTGTGTCATT GTTAATTTTT 60
CGTTTTCATA AATATACGAA ACTGAACTAT TAATTTTTGG GACGCAATCA GCCAACGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR023413--GFP-like
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50030--UBA
PS50033--UBX
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00627--UBA
PF00789--UBX

SMART

SM00165--UBA
SM00166--UBX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding

KEGG

dme:Dmel_CG8209

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002325	Ailuropoda melanoleuca	38.28	1.00e-29	122.00
IUUC-Aca-004329	Anolis carolinensis	43.45	6.00e-24	102.00
IUUC-Acl-008109	Aspergillus clavatus	32.54	4.00e-13	67.80
IUUC-Afl-008531	Aspergillus flavus	31.03	9.00e-12	63.20
IUUC-Aor-010167	Aspergillus oryzae	31.03	9.00e-12	63.20
IUUC-Ame-011399	Astyanax mexicanus	34.85	5.00e-36	143.00
IUUC-Bgr-012203	Blumeria graminis	31.72	4.00e-17	80.90
IUUC-Bta-013151	Bos taurus	36.69	2.00e-31	129.00
IUUC-Bol-015175	Brassica oleracea	32.79	6.00e-05	40.80
IUUC-Cel-018300	Caenorhabditis elegans	36.89	3.00e-37	147.00
IUUC-Cja-019084	Callithrix jacchus	44.74	5.00e-16	77.40
IUUC-Cfa-020997	Canis familiaris	45.33	8.00e-16	76.60
IUUC-Cpo-021736	Cavia porcellus	40.00	3.00e-20	91.30
IUUC-Csa-024040	Chlorocebus sabaeus	48.24	7.00e-20	90.10
IUUC-Cho-024543	Choloepus hoffmanni	45.00	3.00e-16	77.40
IUUC-Cin-025719	Ciona intestinalis	33.13	4.00e-26	110.00
IUUC-Csv-025854	Ciona savignyi	40.93	4.00e-15	74.70
IUUC-Cgl-026704	Colletotrichum gloeosporioides	34.83	1.00e-18	86.30
IUUC-Cne-027046	Cryptococcus neoformans	36.23	1.00e-36	146.00
IUUC-Cme-027235	Cyanidioschyzon merolae	51.35	1.00e-05	43.50
IUUC-Dre-027745	Danio rerio	32.73	6.00e-35	140.00
IUUC-Dno-029598	Dasypus novemcinctus	47.25	4.00e-20	90.90
IUUC-Dor-030917	Dipodomys ordii	45.00	5.00e-16	77.40
IUUC-Dse-031249	Dothistroma septosporum	29.04	3.00e-21	94.70
IUUC-Ete-032960	Echinops telfairi	44.87	1.00e-14	72.80
IUUC-Eca-034294	Equus caballus	40.91	2.00e-21	95.10
IUUC-Eeu-034906	Erinaceus europaeus	37.60	1.00e-16	79.30
IUUC-Fca-035653	Felis catus	45.00	4.00e-16	77.40
IUUC-Fox-037784	Fusarium oxysporum	32.33	2.00e-26	112.00
IUUC-Fso-038135	Fusarium solani	36.73	1.00e-19	89.40
IUUC-Gmo-038755	Gadus morhua	34.49	8.00e-30	123.00
IUUC-Ggr-039936	Gaeumannomyces graminis	34.97	2.00e-24	105.00
IUUC-Gac-042481	Gasterosteus aculeatus	34.20	4.00e-28	117.00
IUUC-Ggo-044821	Gorilla gorilla	44.74	6.00e-16	77.40
IUUC-Hsa-046797	Homo sapiens	48.24	6.00e-20	90.50
IUUC-Itr-048850	Ictidomys tridecemlineatus	37.20	4.00e-29	120.00
IUUC-Lch-049508	Latimeria chalumnae	54.84	2.00e-25	108.00
IUUC-Laf-053932	Loxodonta africana	37.13	4.00e-34	137.00
IUUC-Mcc-055300	Macaca mulatta	48.24	7.00e-20	90.10
IUUC-Mor-056927	Magnaporthe oryzae	29.85	8.00e-21	93.60
IUUC-Mpo-057443	Magnaporthe poae	39.16	5.00e-21	94.00
IUUC-Mla-059083	Melampsora laricipopulina	29.18	2.00e-24	105.00
IUUC-Mvi-060245	Microbotryum violaceum	33.83	7.00e-26	110.00
IUUC-Mmr-060979	Microcebus murinus	48.24	6.00e-20	90.50
IUUC-Mdo-062299	Monodelphis domestica	48.31	5.00e-20	90.90
IUUC-Mmu-063212	Mus musculus	40.30	3.00e-20	91.30
IUUC-Mpu-066540	Mustela putorius furo	38.28	4.00e-29	120.00
IUUC-Mlu-067589	Myotis lucifugus	41.72	8.00e-22	96.70
IUUC-Nfi-068547	Neosartorya fischeri	33.59	1.00e-13	69.30
IUUC-Opr-070772	Ochotona princeps	46.67	1.00e-16	79.30
IUUC-Ont-072006	Oreochromis niloticus	34.33	8.00e-32	129.00
IUUC-Ocu-074333	Oryctolagus cuniculus	40.77	2.00e-20	92.00
IUUC-Ola-086781	Oryzias latipes	34.33	7.00e-34	136.00
IUUC-Oga-088429	Otolemur garnettii	48.24	9.00e-20	89.70
IUUC-Oar-089885	Ovis aries	36.39	2.00e-30	124.00
IUUC-Ptr-091315	Pan troglodytes	44.74	6.00e-16	77.00
IUUC-Pan-092885	Papio anubis	48.24	7.00e-20	90.10
IUUC-Pno-094799	Phaeosphaeria nodorum	35.66	9.00e-14	70.10
IUUC-Ppa-095357	Physcomitrella patens	34.72	6.00e-07	48.10
IUUC-Pfo-096188	Poecilia formosa	35.50	1.00e-31	129.00
IUUC-Pab-097881	Pongo abelii	48.24	6.00e-20	90.10
IUUC-Pca-100977	Procavia capensis	35.60	1.00e-24	105.00
IUUC-Pva-102169	Pteropus vampyrus	42.68	2.00e-16	79.00
IUUC-Pgr-103638	Puccinia graminis	30.40	2.00e-23	102.00
IUUC-Pte-104060	Pyrenophora teres	33.73	2.00e-18	85.50
IUUC-Pyt-104440	Pyrenophora triticirepentis	32.33	2.00e-24	105.00
IUUC-Rno-105459	Rattus norvegicus	40.30	4.00e-20	90.90
IUUC-Sce-106285	Saccharomyces cerevisiae	35.19	3.00e-05	42.40
IUUC-Sha-107526	Sarcophilus harrisii	48.31	4.00e-20	90.90
IUUC-Ssl-108389	Sclerotinia sclerotiorum	29.37	1.00e-05	43.90
IUUC-Sar-112945	Sorex araneus	36.36	3.00e-17	81.30
IUUC-Sre-115055	Sporisorium reilianum	34.59	7.00e-24	103.00
IUUC-Ssc-116114	Sus scrofa	48.31	3.00e-20	91.30
IUUC-Tru-117839	Takifugu rubripes	48.78	5.00e-19	87.40
IUUC-Tsy-118813	Tarsius syrichta	38.89	3.00e-17	81.60
IUUC-Tni-120504	Tetraodon nigroviridis	48.78	5.00e-19	87.00
IUUC-Tre-122034	Trichoderma reesei	40.93	2.00e-15	75.50
IUUC-Tvi-122325	Trichoderma virens	38.89	6.00e-13	67.40
IUUC-Tme-126991	Tuber melanosporum	34.59	2.00e-14	72.00
IUUC-Tbe-128034	Tupaia belangeri	45.00	3.00e-16	78.20
IUUC-Ttr-128468	Tursiops truncatus	35.78	5.00e-26	110.00
IUUC-Uma-129569	Ustilago maydis	36.15	2.00e-20	92.00
IUUC-Vda-129928	Verticillium dahliae	35.54	7.00e-12	63.50
IUUC-Xtr-132119	Xenopus tropicalis	45.83	4.00e-31	127.00
IUUC-Xma-134067	Xiphophorus maculatus	33.73	2.00e-31	128.00
IUUC-Zma-134709	Zea mays	27.70	2.00e-10	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence