iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-10	40.6	480	533

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.................sd..tllvsGsdDgtikvWDlrtgvl 35
           gH   +t++++                 s+  + l+++s D+ti  WD+r +++
   Q: 480  GHRKVITDIHWlpdsfeinrmgsvfenrSGinCQLITCSADCTICFWDIRPQKP 533
           79999*******8777777776666665333355**************987776 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAPKAQKSPK GQRKGKKKTK QQSLVSEEEE PMNMESMGHP EIYPLVLTAK TQEIFNCRID 60
EDMTDEQTYK LIKKEDILAD LQNRAAVSDF HPVKKIVLEY PGEELLLVYD KDFKYGLNFY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAATCTT AGCAACGGAC GCGTCCTAGC AACAACTGCC AGCCACCTGT GGTTGGAAAT 60
TGGAGATTTA TTTTTCTGGG CGAGAAGAGT CAGGCTCCCA TCTCCTACTC TCGAAGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

rno:292165

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001318	Ailuropoda melanoleuca	78.63	0.00e+00	1410.00
IUUC-Apl-003772	Anas platyrhynchos	52.46	0.00e+00	852.00
IUUC-Aca-004627	Anolis carolinensis	57.62	0.00e+00	1022.00
IUUC-Ame-011396	Astyanax mexicanus	42.37	0.00e+00	664.00
IUUC-Bta-012977	Bos taurus	78.17	0.00e+00	1396.00
IUUC-Cja-018966	Callithrix jacchus	78.79	0.00e+00	1419.00
IUUC-Cfa-021086	Canis familiaris	78.79	0.00e+00	1456.00
IUUC-Cpo-021919	Cavia porcellus	76.04	0.00e+00	1380.00
IUUC-Cre-022793	Chlamydomonas reinhardtii	30.86	1.00e-53	205.00
IUUC-Csa-023175	Chlorocebus sabaeus	79.58	0.00e+00	1395.00
IUUC-Cin-025511	Ciona intestinalis	43.90	0.00e+00	767.00
IUUC-Csv-026346	Ciona savignyi	46.26	0.00e+00	773.00
IUUC-Dre-027474	Danio rerio	40.99	0.00e+00	727.00
IUUC-Dme-031619	Drosophila melanogaster	23.29	7.00e-25	109.00
IUUC-Ete-032560	Echinops telfairi	71.84	0.00e+00	787.00
IUUC-Eca-033342	Equus caballus	79.95	0.00e+00	1389.00
IUUC-Eeu-035108	Erinaceus europaeus	74.94	0.00e+00	1259.00
IUUC-Fca-036352	Felis catus	77.25	0.00e+00	1407.00
IUUC-Fal-037291	Ficedula albicollis	45.43	0.00e+00	753.00
IUUC-Gga-040503	Gallus gallus	50.06	0.00e+00	826.00
IUUC-Gac-041827	Gasterosteus aculeatus	39.75	3.00e-167	582.00
IUUC-Ggo-044831	Gorilla gorilla	79.71	0.00e+00	1409.00
IUUC-Hsa-045840	Homo sapiens	79.80	0.00e+00	1410.00
IUUC-Lch-050243	Latimeria chalumnae	53.19	0.00e+00	946.00
IUUC-Loc-052614	Lepisosteus oculatus	53.65	0.00e+00	963.00
IUUC-Laf-053513	Loxodonta africana	76.69	0.00e+00	1219.00
IUUC-Mcc-055678	Macaca mulatta	79.46	0.00e+00	1392.00
IUUC-Meu-056375	Macropus eugenii	64.72	0.00e+00	659.00
IUUC-Mga-060015	Meleagris gallopavo	50.72	0.00e+00	791.00
IUUC-Mmr-060598	Microcebus murinus	75.33	0.00e+00	1342.00
IUUC-Mdo-062125	Monodelphis domestica	65.85	0.00e+00	1130.00
IUUC-Mmu-063162	Mus musculus	88.51	0.00e+00	1572.00
IUUC-Mpu-066891	Mustela putorius furo	77.99	0.00e+00	1390.00
IUUC-Mlu-068017	Myotis lucifugus	74.83	0.00e+00	1393.00
IUUC-Nle-069396	Nomascus leucogenys	77.19	0.00e+00	1370.00
IUUC-Opr-070226	Ochotona princeps	74.53	0.00e+00	922.00
IUUC-Ont-072684	Oreochromis niloticus	40.78	0.00e+00	651.00
IUUC-Oan-073141	Ornithorhynchus anatinus	62.61	6.00e-172	597.00
IUUC-Ocu-074198	Oryctolagus cuniculus	78.01	0.00e+00	1463.00
IUUC-Ola-087453	Oryzias latipes	38.95	4.00e-161	561.00
IUUC-Oga-089138	Otolemur garnettii	73.85	0.00e+00	1348.00
IUUC-Oar-090322	Ovis aries	76.13	0.00e+00	1390.00
IUUC-Ptr-091250	Pan troglodytes	79.80	0.00e+00	1412.00
IUUC-Pan-092051	Papio anubis	80.41	0.00e+00	1343.00
IUUC-Psi-093273	Pelodiscus sinensis	59.64	0.00e+00	1056.00
IUUC-Ppa-095837	Physcomitrella patens	35.04	2.00e-44	173.00
IUUC-Pfo-096244	Poecilia formosa	41.13	3.00e-173	602.00
IUUC-Pab-098623	Pongo abelii	79.35	0.00e+00	1399.00
IUUC-Pca-100831	Procavia capensis	65.16	0.00e+00	961.00
IUUC-Sha-107109	Sarcophilus harrisii	63.78	0.00e+00	910.00
IUUC-Smo-109594	Selaginella moellendorffii	28.05	1.00e-19	90.90
IUUC-Sar-113575	Sorex araneus	63.87	0.00e+00	1092.00
IUUC-Ssc-115610	Sus scrofa	76.96	0.00e+00	1406.00
IUUC-Tgu-116483	Taeniopygia guttata	46.64	0.00e+00	724.00
IUUC-Tru-117765	Takifugu rubripes	39.01	4.00e-173	601.00
IUUC-Tsy-118826	Tarsius syrichta	75.67	0.00e+00	1390.00
IUUC-Ttr-129263	Tursiops truncatus	70.74	0.00e+00	1214.00
IUUC-Vpa-130416	Vicugna pacos	73.37	0.00e+00	812.00
IUUC-Xtr-131930	Xenopus tropicalis	53.85	0.00e+00	952.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence