iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107486

Ensembl Protein ID

ENSSHAP00000011242.1

UniProt Accession

G3W737; G3W737_SARHA

Genbank Protein ID

ENSSHAP00000011242

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01025164

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000009672.1	ENSSHAT00000011337.1	ENSSHAP00000011242.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-16	59.8	124	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++ +d + l s+sdD+ i  W++ t++
   Q: 124  GHDNKVNCIQWhQDnDCLYSCSDDKHIVEWNTQTCR 159
           8***********66699*********9977766665 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MAASGGGRRD PLAPSGSPCA FSPRGQHYFS LAGPDGHLRV WETASSRLHQ DFVPSAHLSA 60
TCTCLAWAPP RSLAKEGPQR KKRKSEAVGT GDQVDLLAIG TAVGSILLYN TLKGELQSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCTGCGCA GGCGCGCGGC CGAACACGTG GCTGCTGCGG GGCCAGAAGA GCAATGGCGG 60
CGAGTGGCGG AGGCCGCCGC GATCCCCTGG CCCCCTCCGG GAGCCCCTGC GCTTTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	81.45	0.00e+00	962.00
IUUC-Atr-002533	Amborella trichopoda	20.29	4.00e-23	103.00
IUUC-Apl-003242	Anas platyrhynchos	75.28	0.00e+00	808.00
IUUC-Aca-004607	Anolis carolinensis	73.11	0.00e+00	875.00
IUUC-Aly-006074	Arabidopsis lyrata	21.89	3.00e-15	76.60
IUUC-Ath-007222	Arabidopsis thaliana	23.13	9.00e-15	75.10
IUUC-Ame-011014	Astyanax mexicanus	53.41	1.00e-169	589.00
IUUC-Bta-012605	Bos taurus	80.03	0.00e+00	958.00
IUUC-Bdi-014072	Brachypodium distachyon	20.83	1.00e-18	88.20
IUUC-Bol-016255	Brassica oleracea	22.77	3.00e-24	107.00
IUUC-Bra-016850	Brassica rapa	23.33	4.00e-24	106.00
IUUC-Cja-019620	Callithrix jacchus	81.36	0.00e+00	974.00
IUUC-Cfa-020520	Canis familiaris	80.90	0.00e+00	969.00
IUUC-Cpo-022456	Cavia porcellus	77.50	0.00e+00	927.00
IUUC-Cho-024726	Choloepus hoffmanni	81.25	0.00e+00	937.00
IUUC-Cin-025761	Ciona intestinalis	37.06	9.00e-98	350.00
IUUC-Dre-028051	Danio rerio	54.89	6.00e-173	600.00
IUUC-Dno-030031	Dasypus novemcinctus	81.03	0.00e+00	977.00
IUUC-Dme-031653	Drosophila melanogaster	26.39	1.00e-43	171.00
IUUC-Ete-032863	Echinops telfairi	94.41	1.00e-77	284.00
IUUC-Eca-033243	Equus caballus	81.82	0.00e+00	832.00
IUUC-Eeu-034970	Erinaceus europaeus	76.59	0.00e+00	674.00
IUUC-Fca-036009	Felis catus	81.11	0.00e+00	961.00
IUUC-Fal-037264	Ficedula albicollis	72.81	0.00e+00	787.00
IUUC-Gmo-039124	Gadus morhua	55.44	1.00e-176	613.00
IUUC-Gga-040862	Gallus gallus	73.04	0.00e+00	867.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.42	0.00e+00	633.00
IUUC-Gma-042795	Glycine max	21.14	1.00e-16	81.30
IUUC-Ggo-044432	Gorilla gorilla	81.36	0.00e+00	978.00
IUUC-Hsa-047036	Homo sapiens	81.36	0.00e+00	976.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	79.67	0.00e+00	956.00
IUUC-Lch-049553	Latimeria chalumnae	67.89	0.00e+00	768.00
IUUC-Laf-053462	Loxodonta africana	79.40	0.00e+00	976.00
IUUC-Mcc-055239	Macaca mulatta	81.70	0.00e+00	981.00
IUUC-Mtr-057977	Medicago truncatula	21.59	8.00e-17	82.00
IUUC-Mga-060079	Meleagris gallopavo	74.76	0.00e+00	797.00
IUUC-Mmr-061472	Microcebus murinus	80.03	0.00e+00	971.00
IUUC-Mdo-061972	Monodelphis domestica	96.33	0.00e+00	1198.00
IUUC-Mmu-063354	Mus musculus	76.67	0.00e+00	914.00
IUUC-Mac-065064	Musa acuminata	23.08	7.00e-17	81.60
IUUC-Mpu-066877	Mustela putorius furo	80.73	0.00e+00	965.00
IUUC-Mlu-067476	Myotis lucifugus	78.20	0.00e+00	934.00
IUUC-Nle-069119	Nomascus leucogenys	81.53	0.00e+00	976.00
IUUC-Ont-072093	Oreochromis niloticus	55.30	0.00e+00	682.00
IUUC-Oan-072944	Ornithorhynchus anatinus	78.83	0.00e+00	852.00
IUUC-Ocu-074472	Oryctolagus cuniculus	79.83	0.00e+00	944.00
IUUC-Oba-075009	Oryza barthii	22.68	9.00e-16	78.60
IUUC-Ogl-077189	Oryza glaberrima	21.10	2.00e-16	80.50
IUUC-Oin-079064	Oryza indica	22.68	1.00e-15	78.20
IUUC-Opu-083604	Oryza punctata	22.22	2.00e-15	77.40
IUUC-Oru-084620	Oryza rufipogon	22.68	2.00e-15	77.40
IUUC-Osa-085345	Oryza sativa	22.68	9.00e-16	78.60
IUUC-Ola-086626	Oryzias latipes	54.74	0.00e+00	665.00
IUUC-Oga-087911	Otolemur garnettii	80.57	0.00e+00	955.00
IUUC-Ptr-091603	Pan troglodytes	81.03	0.00e+00	974.00
IUUC-Pan-092569	Papio anubis	81.70	0.00e+00	981.00
IUUC-Pma-094287	Petromyzon marinus	52.24	0.00e+00	629.00
IUUC-Ppa-095327	Physcomitrella patens	25.35	1.00e-25	111.00
IUUC-Pfo-097292	Poecilia formosa	54.25	0.00e+00	627.00
IUUC-Pab-097878	Pongo abelii	81.76	0.00e+00	966.00
IUUC-Pop-099418	Populus trichocarpa	21.54	9.00e-19	88.20
IUUC-Pca-100941	Procavia capensis	74.13	0.00e+00	848.00
IUUC-Ppe-101779	Prunus persica	20.73	1.00e-20	95.10
IUUC-Pva-102493	Pteropus vampyrus	74.37	0.00e+00	873.00
IUUC-Rno-105084	Rattus norvegicus	77.33	0.00e+00	910.00
IUUC-Smo-108825	Selaginella moellendorffii	22.06	1.00e-20	94.70
IUUC-Sit-110825	Setaria italica	21.03	3.00e-17	83.60
IUUC-Sly-111365	Solanum lycopersicum	23.78	4.00e-15	76.30
IUUC-Stu-112812	Solanum tuberosum	21.12	2.00e-16	80.90
IUUC-Sar-113326	Sorex araneus	82.92	3.00e-126	445.00
IUUC-Sbi-114426	Sorghum bicolor	21.43	3.00e-24	106.00
IUUC-Tgu-116726	Taeniopygia guttata	71.55	0.00e+00	857.00
IUUC-Tru-117848	Takifugu rubripes	55.22	0.00e+00	640.00
IUUC-Tsy-119091	Tarsius syrichta	59.05	2.00e-118	419.00
IUUC-Tni-120591	Tetraodon nigroviridis	54.82	0.00e+00	642.00
IUUC-Tca-121576	Theobroma cacao	23.31	2.00e-17	84.30
IUUC-Tae-125648	Triticum aestivum	20.57	6.00e-17	82.40
IUUC-Tbe-127832	Tupaia belangeri	81.33	0.00e+00	851.00
IUUC-Ttr-128812	Tursiops truncatus	82.89	0.00e+00	857.00
IUUC-Xma-133557	Xiphophorus maculatus	54.59	0.00e+00	632.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence