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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Mmu-064065
UUCD1 version UUC-MuM-00502
Ensembl Protein ID ENSMUSP00000112500.1
UniProt Accession Q6KAU8; Q6PAU0; A16L2_MOUSE
Genbank Protein ID BAD21359.1; AAH60054.1
Protein Name Autophagy-related protein 16-2; APG16-like 2
Genbank Nucleotide ID AK131109; AC107638
Gene Name Atg16l2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000047767.17 ENSMUST00000207740.1 ENSMUSP00000146933.1
ENSMUSG00000047767.17 ENSMUST00000120267.8 ENSMUSP00000112500.1
ENSMUSG00000047767.17 ENSMUST00000143630.7 ENSMUSP00000117029.1
ENSMUSG00000047767.17 ENSMUST00000122116.7 ENSMUSP00000113320.1
ENSMUSG00000047767.17 ENSMUST00000140553.1 ENSMUSP00000116414.1
ENSMUSG00000047767.17 ENSMUST00000207121.1 ENSMUSP00000146572.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IIDiRefIndex
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusdbPTM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.50e-27 94.4 339 374
UBD/Beta-Prp 2.40e-46 159.4 337 622
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
    H ++v++++f ++ ll++G+ D i++W++ g+l
   Q: 339 HLSEVNAVCFgPNsSLLATGGADRLIHLWNVVGGRL 374
    99*********7779***************987765 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
    ++h s +++v+f p++sllatg++d+ i +w+v g l ++l+g + +t+v+f+p+g+ + + +++++w + + tl+gh
   Q: 337 DAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLeaNQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGH 425
    789999********************************88899******************9999999********************* PP
   S: 94 edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
    +d+v++ +f +++ v+Gs+drt++ wdl +c++ t ++ + c v + + +++sG++D+++r+Wd++ +++ +++
   Q: 426 KDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSR-TINVLS---YCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIP--VQGR 508
    ************************************9.666655...4555555556*************************5..589* PP
   S: 183 vyslsfdsngkelvsgsldgtvklwdlqtgec.....vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnss 266
    v+sl +++++ +l+s+s+d+t+k+ dl+ +++ + +++ +d++k fsp+ + + gss g ++iWd+ +g+l ++lq+++ +
   Q: 509 VTSLHLSYDQLHLLSCSRDNTLKVIDLRISNIrqvfrADGFKCSSDWTK-AVFSPDRSYALAGSSNGDLYIWDVNTGKLETSLQGPHCT 596
    ****************************666634444566666777777.7799*********************************77 PP
   S: 267 visvavlsfgdnvlvlgsedskvniw 292
    + +++f++n++v++++ kv +w
   Q: 597 AVNAVAWCFSGNHVVSVDQGRKVVLW 622
    7777778*************9**999 PP
   

Organism Mus musculus
Functional Description
(View)

Functional Description



     May play a role in autophagy.
May play a role in autophagy.
Protein Sequence
(Fasta)
MAGPGAPCDP CAPAAVWKRH IVRQLRHRDR TQKALFLELV PAYNHLLEKA ELLAKFSEKL 60
KSEPKDAIST RHEDWREEVS GTGPDQVSSP ASLRVKWQQE KKGLQLVCGE MAYQVVKKSA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mmu-064065|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCCCTGCTGC TTACTCCGGG ACAGAAACGC ACACCTCTGG GACTGAGGGT TTTTGCTGGG 60
CCGCAGCAGC ACCTGCTTTG AGGTGTCCAG ATCTCCCCGA CAAAAGCGCT TGGTACAGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mmu-064065|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0072--Autophagy
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0005654--C:nucleoplasm
GO:0000045--P:autophagosome assembly
GO:0039689--P:negative stranded viral RNA replication
GO:0015031--P:protein transport

KEGG mmu:73683
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001470 Ailuropoda melanoleuca 65.66 0.00e+00 719.00
IUUC-Aca-004664 Anolis carolinensis 67.06 2.00e-100 358.00
IUUC-Ame-011152 Astyanax mexicanus 42.20 2.00e-119 422.00
IUUC-Bta-013118 Bos taurus 79.81 0.00e+00 884.00
IUUC-Cja-020002 Callithrix jacchus 81.82 0.00e+00 904.00
IUUC-Cfa-020878 Canis familiaris 78.12 0.00e+00 876.00
IUUC-Cpo-022476 Cavia porcellus 81.04 0.00e+00 881.00
IUUC-Csa-024134 Chlorocebus sabaeus 81.44 0.00e+00 894.00
IUUC-Cho-024853 Choloepus hoffmanni 68.29 3.00e-177 614.00
IUUC-Dre-027949 Danio rerio 41.42 5.00e-129 454.00
IUUC-Dno-029683 Dasypus novemcinctus 80.34 0.00e+00 746.00
IUUC-Dor-030897 Dipodomys ordii 74.44 0.00e+00 889.00
IUUC-Ete-032957 Echinops telfairi 90.04 2.00e-129 456.00
IUUC-Eca-033303 Equus caballus 87.96 6.00e-163 566.00
IUUC-Eeu-035336 Erinaceus europaeus 71.22 1.00e-148 520.00
IUUC-Fca-036232 Felis catus 81.41 0.00e+00 954.00
IUUC-Gmo-038880 Gadus morhua 48.95 1.00e-69 258.00
IUUC-Gac-042500 Gasterosteus aculeatus 39.74 1.00e-88 321.00
IUUC-Ggo-045130 Gorilla gorilla 88.59 0.00e+00 691.00
IUUC-Hsa-046359 Homo sapiens 83.00 0.00e+00 877.00
IUUC-Itr-048780 Ictidomys tridecemlineatus 83.47 0.00e+00 953.00
IUUC-Lch-050669 Latimeria chalumnae 54.22 2.00e-95 342.00
IUUC-Loc-052789 Lepisosteus oculatus 43.11 3.00e-116 412.00
IUUC-Laf-053699 Loxodonta africana 81.47 0.00e+00 906.00
IUUC-Mcc-055657 Macaca mulatta 77.21 0.00e+00 813.00
IUUC-Meu-056639 Macropus eugenii 49.02 9.00e-109 387.00
IUUC-Mmr-061314 Microcebus murinus 74.08 0.00e+00 801.00
IUUC-Mdo-061841 Monodelphis domestica 63.71 0.00e+00 697.00
IUUC-Mpu-066742 Mustela putorius furo 79.42 0.00e+00 871.00
IUUC-Mlu-067019 Myotis lucifugus 81.09 0.00e+00 790.00
IUUC-Nle-069037 Nomascus leucogenys 83.20 0.00e+00 919.00
IUUC-Opr-071039 Ochotona princeps 77.85 0.00e+00 866.00
IUUC-Oan-073431 Ornithorhynchus anatinus 72.22 3.00e-139 488.00
IUUC-Ocu-074772 Oryctolagus cuniculus 80.95 0.00e+00 811.00
IUUC-Ola-086964 Oryzias latipes 52.61 1.00e-83 302.00
IUUC-Oga-088188 Otolemur garnettii 80.39 0.00e+00 846.00
IUUC-Oar-090231 Ovis aries 73.27 0.00e+00 858.00
IUUC-Ptr-091434 Pan troglodytes 80.92 0.00e+00 840.00
IUUC-Pan-091868 Papio anubis 82.18 0.00e+00 894.00
IUUC-Psi-093652 Pelodiscus sinensis 64.50 8.00e-165 573.00
IUUC-Pfo-096960 Poecilia formosa 41.64 3.00e-100 359.00
IUUC-Pab-097776 Pongo abelii 82.92 0.00e+00 835.00
IUUC-Pca-100220 Procavia capensis 62.44 1.00e-169 589.00
IUUC-Pva-103135 Pteropus vampyrus 82.26 0.00e+00 853.00
IUUC-Rno-105529 Rattus norvegicus 94.86 0.00e+00 1167.00
IUUC-Sha-107062 Sarcophilus harrisii 64.49 0.00e+00 736.00
IUUC-Sar-113109 Sorex araneus 65.02 9.00e-131 460.00
IUUC-Ssc-115271 Sus scrofa 80.45 0.00e+00 882.00
IUUC-Ttr-128267 Tursiops truncatus 76.89 0.00e+00 819.00
Created Date 25-Jun-2017

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