iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000001714.3	ENSXETT00000003881.3	ENSXETP00000003881.3
ENSXETG00000001714.3	ENSXETT00000003595.3	ENSXETP00000003595.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	65.20	1.00e-128	456.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Functional Description
(View)

Binds to the LIM domain of a wide variety of LIM domain-containing transcription factors. Acts as a coactivator together with otx2 to stimulate lhx1/lim1-mediated activation of the gsc promoter in the Spemann organizer. Acts synergistically with lhx1/lim1 and ssbp in axis formation (By similarity).

Protein Sequence
(Fasta)

MLDRDVGPTP MYPPTYLEPG IGRHTPYGNQ TDYRIFELNK RLQNWTEECD NLWWDAFTTE 60
FFEDDAMLTI TFCLEDGPKR YTIGRTLIPR YFRSIFEGGA TELYYVLKHP KESFHNNFVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGCCAGCA AGCCAGGAGC AGGCTGGCGG TTGCAGGAGC AGCCATTGTT GAGAAAGAAA 60
GGGGGAGAGA GAAAACCTTG CAAACAAAGA GAGAGAAAAA GAAAGGTCCT TCCTCCACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0030274--F:LIM domain binding
GO:0042803--F:protein homodimerization activity
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0007275--P:multicellular organism development
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

KEGG

xtr:407886

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.30	4.00e-04	40.40
IUUC-Aml-002031	Ailuropoda melanoleuca	97.87	0.00e+00	682.00
IUUC-Atr-003083	Amborella trichopoda	22.06	8.00e-04	39.70
IUUC-Apl-004210	Anas platyrhynchos	97.66	5.00e-160	556.00
IUUC-Aca-005241	Anolis carolinensis	98.93	0.00e+00	688.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	4.00e-06	47.00
IUUC-Ath-007339	Arabidopsis thaliana	25.00	3.00e-06	47.40
IUUC-Acl-008255	Aspergillus clavatus	20.18	2.00e-05	44.30
IUUC-Ame-010910	Astyanax mexicanus	95.73	0.00e+00	661.00
IUUC-Bgr-012180	Blumeria graminis	22.17	3.00e-05	43.90
IUUC-Bta-012596	Bos taurus	74.93	6.00e-157	546.00
IUUC-Bci-013927	Botrytis cinerea	24.66	4.00e-06	47.00
IUUC-Bol-015721	Brassica oleracea	25.53	8.00e-07	48.90
IUUC-Bra-017183	Brassica rapa	25.53	8.00e-07	48.90
IUUC-Cel-018189	Caenorhabditis elegans	33.62	6.00e-30	125.00
IUUC-Cja-019586	Callithrix jacchus	76.27	2.00e-158	551.00
IUUC-Cfa-021188	Canis familiaris	97.87	0.00e+00	680.00
IUUC-Cpo-022350	Cavia porcellus	97.33	0.00e+00	673.00
IUUC-Csa-023816	Chlorocebus sabaeus	97.60	0.00e+00	679.00
IUUC-Cho-024958	Choloepus hoffmanni	61.78	2.00e-65	242.00
IUUC-Cin-025721	Ciona intestinalis	49.37	1.00e-88	319.00
IUUC-Csv-026065	Ciona savignyi	51.57	8.00e-93	333.00
IUUC-Dre-027356	Danio rerio	70.97	9.00e-154	536.00
IUUC-Dno-029918	Dasypus novemcinctus	98.27	0.00e+00	662.00
IUUC-Dor-030634	Dipodomys ordii	97.87	0.00e+00	682.00
IUUC-Dse-031245	Dothistroma septosporum	24.00	2.00e-04	41.20
IUUC-Dme-031667	Drosophila melanogaster	63.74	2.00e-126	445.00
IUUC-Ete-032246	Echinops telfairi	73.67	5.00e-153	533.00
IUUC-Eca-034015	Equus caballus	75.42	2.00e-158	551.00
IUUC-Eeu-034902	Erinaceus europaeus	97.87	0.00e+00	682.00
IUUC-Fca-035903	Felis catus	97.35	0.00e+00	676.00
IUUC-Fal-037407	Ficedula albicollis	76.69	2.00e-155	541.00
IUUC-Gmo-039466	Gadus morhua	92.20	0.00e+00	691.00
IUUC-Ggr-040030	Gaeumannomyces graminis	25.93	7.00e-03	36.20
IUUC-Gga-040214	Gallus gallus	99.46	0.00e+00	693.00
IUUC-Gac-042214	Gasterosteus aculeatus	91.80	0.00e+00	695.00
IUUC-Gma-042794	Glycine max	24.53	8.00e-07	49.30
IUUC-Ggo-044988	Gorilla gorilla	75.42	3.00e-159	554.00
IUUC-Hsa-046092	Homo sapiens	76.12	3.00e-160	557.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	97.87	0.00e+00	681.00
IUUC-Lch-049895	Latimeria chalumnae	80.65	1.00e-97	348.00
IUUC-Lpe-050806	Leersia perrieri	25.35	6.00e-06	46.20
IUUC-Loc-052845	Lepisosteus oculatus	96.27	0.00e+00	684.00
IUUC-Lma-053090	Leptosphaeria maculans	23.62	2.00e-04	41.20
IUUC-Laf-054538	Loxodonta africana	94.82	0.00e+00	630.00
IUUC-Mcc-055116	Macaca mulatta	81.55	2.00e-119	421.00
IUUC-Meu-056777	Macropus eugenii	92.27	0.00e+00	626.00
IUUC-Mpo-057376	Magnaporthe poae	21.99	3.00e-03	37.40
IUUC-Mtr-058142	Medicago truncatula	24.53	8.00e-07	49.30
IUUC-Mga-059716	Meleagris gallopavo	76.12	1.00e-154	538.00
IUUC-Mmr-060649	Microcebus murinus	75.14	1.00e-157	549.00
IUUC-Mdo-062535	Monodelphis domestica	75.70	7.00e-156	543.00
IUUC-Mmu-064036	Mus musculus	75.28	5.00e-160	556.00
IUUC-Mac-065338	Musa acuminata	23.67	1.00e-05	45.10
IUUC-Mpu-065719	Mustela putorius furo	97.87	0.00e+00	681.00
IUUC-Mlu-067219	Myotis lucifugus	96.02	0.00e+00	663.00
IUUC-Ncr-068691	Neurospora crassa	22.45	4.00e-04	40.40
IUUC-Nle-068983	Nomascus leucogenys	76.27	5.00e-159	553.00
IUUC-Opr-070467	Ochotona princeps	97.87	0.00e+00	682.00
IUUC-Ont-071566	Oreochromis niloticus	94.67	0.00e+00	700.00
IUUC-Oan-073368	Ornithorhynchus anatinus	97.33	0.00e+00	674.00
IUUC-Ocu-074854	Oryctolagus cuniculus	75.14	2.00e-159	555.00
IUUC-Ome-081687	Oryza meridionalis	26.32	2.00e-03	37.40
IUUC-Ola-086364	Oryzias latipes	94.93	0.00e+00	700.00
IUUC-Oga-088235	Otolemur garnettii	74.30	1.00e-154	538.00
IUUC-Oar-089547	Ovis aries	97.87	0.00e+00	682.00
IUUC-Ptr-091423	Pan troglodytes	75.70	1.00e-158	552.00
IUUC-Pan-092378	Papio anubis	97.60	0.00e+00	681.00
IUUC-Psi-093638	Pelodiscus sinensis	77.09	1.00e-153	535.00
IUUC-Pma-094384	Petromyzon marinus	65.34	2.00e-52	198.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.66	3.00e-04	40.40
IUUC-Pfo-096031	Poecilia formosa	92.00	0.00e+00	699.00
IUUC-Pab-097886	Pongo abelii	76.27	5.00e-159	553.00
IUUC-Pop-099430	Populus trichocarpa	24.85	5.00e-06	47.00
IUUC-Pca-101138	Procavia capensis	97.87	0.00e+00	682.00
IUUC-Ppe-101293	Prunus persica	29.67	2.00e-06	47.80
IUUC-Pva-103215	Pteropus vampyrus	75.42	4.00e-159	553.00
IUUC-Pte-104238	Pyrenophora teres	24.41	5.00e-04	39.30
IUUC-Rno-105968	Rattus norvegicus	75.56	3.00e-160	557.00
IUUC-Sha-107595	Sarcophilus harrisii	97.07	0.00e+00	668.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	23.45	3.00e-05	43.90
IUUC-Smo-109552	Selaginella moellendorffii	18.13	2.00e-03	38.10
IUUC-Sly-110873	Solanum lycopersicum	27.87	5.00e-06	46.60
IUUC-Stu-112586	Solanum tuberosum	20.00	6.00e-03	36.20
IUUC-Sar-113076	Sorex araneus	73.82	7.00e-104	370.00
IUUC-Sre-115143	Sporisorium reilianum	19.12	2.00e-03	37.70
IUUC-Ssc-115755	Sus scrofa	98.39	0.00e+00	688.00
IUUC-Tgu-117326	Taeniopygia guttata	76.40	1.00e-154	539.00
IUUC-Tru-117858	Takifugu rubripes	71.58	3.00e-157	547.00
IUUC-Tsy-119296	Tarsius syrichta	68.99	5.00e-139	487.00
IUUC-Tni-119822	Tetraodon nigroviridis	89.20	0.00e+00	637.00
IUUC-Tca-120935	Theobroma cacao	29.67	1.00e-06	48.90
IUUC-Tbe-127366	Tupaia belangeri	96.27	0.00e+00	657.00
IUUC-Ttr-128484	Tursiops truncatus	75.38	2.00e-147	514.00
IUUC-Vpa-130304	Vicugna pacos	73.21	1.00e-118	419.00
IUUC-Vvi-131560	Vitis vinifera	28.57	5.00e-06	47.00
IUUC-Xma-134288	Xiphophorus maculatus	94.93	0.00e+00	702.00
IUUC-Yli-134374	Yarrowia lipolytica	20.73	1.00e-05	44.70
IUUC-Zma-135310	Zea mays	23.16	2.00e-04	40.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence