iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066797

Ensembl Protein ID

ENSMPUP00000019638.1

UniProt Accession

M3Z7S5; M3Z7S5_MUSPF

Genbank Protein ID

ENSMPUP00000019638

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01053152

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000019766.1	ENSMPUT00000019918.1	ENSMPUP00000019638.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-06	27.0	21	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle ++  p++lpC H++++dCl ++        ++ rCP Cr
   Q: 21   CKICLEQLRA-PKTLPCLHTYCQDCLAQL-----ADGGHLRCPECR 60
           99******99.***************555.....499********8 PP

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

MVSQGSSPSL LEALSSDFLA CKICLEQLRA PKTLPCLHTY CQDCLAQLAD GGHLRCPECR 60
ETVPVPPAGV AAFKTNFFVN GLLDLVRARA GGDLRAGKPA CALCPLMGGA GTGGPATARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCCC AGGGATCCTC ACCCTCCCTC CTGGAAGCCC TGAGCAGCGA TTTCCTAGCC 60
TGTAAAATAT GCCTGGAGCA GCTGCGCGCT CCCAAGACAT TGCCCTGCCT GCACACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	94.59	0.00e+00	1249.00
IUUC-Aca-004996	Anolis carolinensis	52.28	2.00e-76	280.00
IUUC-Bta-012368	Bos taurus	86.64	0.00e+00	1172.00
IUUC-Cja-019698	Callithrix jacchus	87.42	0.00e+00	1191.00
IUUC-Csa-023090	Chlorocebus sabaeus	88.33	0.00e+00	1119.00
IUUC-Dno-030051	Dasypus novemcinctus	78.74	0.00e+00	971.00
IUUC-Ete-032312	Echinops telfairi	88.48	1.00e-88	318.00
IUUC-Eca-033253	Equus caballus	95.59	2.00e-107	381.00
IUUC-Eeu-034772	Erinaceus europaeus	79.71	8.00e-53	200.00
IUUC-Fca-036198	Felis catus	81.06	0.00e+00	1035.00
IUUC-Ggo-045486	Gorilla gorilla	88.72	0.00e+00	1129.00
IUUC-Hsa-046238	Homo sapiens	88.59	0.00e+00	1124.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	82.23	0.00e+00	1052.00
IUUC-Loc-052915	Lepisosteus oculatus	39.38	1.00e-54	207.00
IUUC-Laf-053640	Loxodonta africana	83.68	0.00e+00	1050.00
IUUC-Mcc-055540	Macaca mulatta	88.20	0.00e+00	1134.00
IUUC-Mmr-060840	Microcebus murinus	88.07	0.00e+00	1155.00
IUUC-Mmu-064375	Mus musculus	77.46	0.00e+00	1023.00
IUUC-Mlu-067996	Myotis lucifugus	90.27	0.00e+00	1187.00
IUUC-Nle-069238	Nomascus leucogenys	94.49	1.00e-113	402.00
IUUC-Oga-089156	Otolemur garnettii	84.20	0.00e+00	1154.00
IUUC-Oar-090056	Ovis aries	83.20	0.00e+00	1065.00
IUUC-Ptr-090837	Pan troglodytes	83.98	0.00e+00	694.00
IUUC-Psi-093493	Pelodiscus sinensis	45.00	9.00e-60	224.00
IUUC-Pab-097607	Pongo abelii	88.59	0.00e+00	1150.00
IUUC-Pva-102758	Pteropus vampyrus	84.70	0.00e+00	1097.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence