iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050046

Ensembl Protein ID

ENSLACP00000018063.1

UniProt Accession

H3B842; H3B842_LATCH

Genbank Protein ID

ENSLACP00000018063

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01018411

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000015915.1	ENSLACT00000018194.1	ENSLACP00000018063.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-19	68.5	528	564

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+ ++cl++++++lvsG++D+ +kvW   +g +l+
   Q: 528  GHTGTIRCLELHENRLVSGARDCWVKVWHKISGQCLR 564
           8**********569********99****988888876 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MKDHSGQGDF FRLKADFAEV LRCVDGDSRL PVCGVCENCL LASKLSWTKE WFVRAGEQSK 60
RRFVLGITRR IHSPDLLEKL EHVLQPTLGK DFTYSRSSVN PSLLQDLSRC SSDRALDKKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATCTCAG CACCAGCAAT ACCAGGGACA CCTATTTCAC CTGGTCCATG GGGCCGGCCG 60
GCTTCAGCTG ATCTCTTTGC TTCATTCTTT CTTTGAAAGA GGAATCAAAT GAGAAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001837	Ailuropoda melanoleuca	45.30	7.00e-92	332.00
IUUC-Apl-003572	Anas platyrhynchos	38.47	3.00e-148	518.00
IUUC-Aca-004297	Anolis carolinensis	34.84	0.00e+00	647.00
IUUC-Ame-011058	Astyanax mexicanus	37.38	6.00e-132	464.00
IUUC-Bta-012667	Bos taurus	38.00	4.00e-91	329.00
IUUC-Cja-019163	Callithrix jacchus	37.17	0.00e+00	692.00
IUUC-Cfa-020784	Canis familiaris	38.08	0.00e+00	671.00
IUUC-Csa-023597	Chlorocebus sabaeus	39.80	1.00e-147	516.00
IUUC-Cho-024559	Choloepus hoffmanni	33.60	3.00e-74	272.00
IUUC-Dre-027496	Danio rerio	34.91	5.00e-120	424.00
IUUC-Dno-028995	Dasypus novemcinctus	36.18	1.00e-179	623.00
IUUC-Ete-032823	Echinops telfairi	48.92	3.00e-53	203.00
IUUC-Eca-033666	Equus caballus	36.34	2.00e-152	533.00
IUUC-Eeu-035054	Erinaceus europaeus	28.87	1.00e-60	228.00
IUUC-Fca-035589	Felis catus	35.50	0.00e+00	635.00
IUUC-Fal-037403	Ficedula albicollis	36.32	5.00e-123	435.00
IUUC-Gmo-038669	Gadus morhua	32.66	4.00e-75	275.00
IUUC-Gga-041227	Gallus gallus	37.14	3.00e-137	482.00
IUUC-Hsa-046221	Homo sapiens	36.71	0.00e+00	699.00
IUUC-Itr-049011	Ictidomys tridecemlineatus	35.33	5.00e-180	624.00
IUUC-Loc-052366	Lepisosteus oculatus	40.47	3.00e-171	595.00
IUUC-Laf-053745	Loxodonta africana	36.82	0.00e+00	670.00
IUUC-Mcc-054826	Macaca mulatta	36.11	0.00e+00	677.00
IUUC-Meu-056636	Macropus eugenii	36.00	1.00e-32	135.00
IUUC-Mga-060185	Meleagris gallopavo	37.11	5.00e-134	471.00
IUUC-Mdo-062382	Monodelphis domestica	34.52	3.00e-158	552.00
IUUC-Mmu-063623	Mus musculus	35.07	2.00e-172	599.00
IUUC-Mpu-066872	Mustela putorius furo	39.52	1.00e-122	434.00
IUUC-Mlu-067552	Myotis lucifugus	38.50	6.00e-85	308.00
IUUC-Nle-069247	Nomascus leucogenys	38.73	6.00e-159	554.00
IUUC-Opr-070455	Ochotona princeps	39.48	6.00e-90	325.00
IUUC-Ont-071926	Oreochromis niloticus	36.32	7.00e-95	341.00
IUUC-Oan-073411	Ornithorhynchus anatinus	38.63	3.00e-134	472.00
IUUC-Ocu-073893	Oryctolagus cuniculus	35.61	9.00e-152	531.00
IUUC-Oga-087937	Otolemur garnettii	37.18	2.00e-92	333.00
IUUC-Oar-089680	Ovis aries	34.84	1.00e-178	620.00
IUUC-Ptr-091549	Pan troglodytes	35.40	0.00e+00	650.00
IUUC-Pan-091904	Papio anubis	36.37	0.00e+00	672.00
IUUC-Psi-093181	Pelodiscus sinensis	40.48	0.00e+00	750.00
IUUC-Pma-094711	Petromyzon marinus	48.13	4.00e-66	244.00
IUUC-Pab-098067	Pongo abelii	36.14	0.00e+00	687.00
IUUC-Pca-100867	Procavia capensis	35.77	2.00e-97	349.00
IUUC-Pva-102209	Pteropus vampyrus	39.65	6.00e-141	494.00
IUUC-Rno-105374	Rattus norvegicus	34.23	3.00e-153	536.00
IUUC-Sha-107459	Sarcophilus harrisii	38.02	1.00e-84	306.00
IUUC-Tgu-117261	Taeniopygia guttata	39.86	2.00e-84	306.00
IUUC-Tru-117705	Takifugu rubripes	39.38	3.00e-28	117.00
IUUC-Tni-120365	Tetraodon nigroviridis	40.46	8.00e-27	113.00
IUUC-Tbe-128015	Tupaia belangeri	38.44	1.00e-132	467.00
IUUC-Ttr-128654	Tursiops truncatus	38.42	5.00e-137	481.00
IUUC-Vpa-130176	Vicugna pacos	37.48	1.00e-123	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence