iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000009513.3	ENSCJAT00000018458.1	ENSCJAP00000017452.1
ENSCJAG00000009513.3	ENSCJAT00000018469.3	ENSCJAP00000017463.3
ENSCJAG00000009513.3	ENSCJAT00000064114.1	ENSCJAP00000052319.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-09	38.8	426	457

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           tc+++  s  +l+vsG++Dg +++ Dlrt ++
   Q: 426  TCVNLddSPpNLMVSGNRDGRVRIHDLRTSNV 457
           89999973359*****************9876 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MDECSLEEFR RRWQEELAQA QAPRKWRRSD AAERRARRPE VAPGRSEQAL GDPALAQGLL 60
EGAGRPPAAR ATRAEAQDVA SRSGFQQLVD QLIRDLNEMN DVPFFDIQLP YELAINIFQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAAT GCAGCTTAGA GGAGTTCCGT CGGCGCTGGC AGGAGGAGCT GGCGCAGGCC 60
CAGGCGCCTA GGAAGTGGCG GCGGTCTGAT GCTGCCGAGA GGCGGGCGCG ACGGCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:1990393--C:3M complex
GO:0031467--C:Cul7-RING ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0048471--C:perinuclear region of cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008283--P:cell proliferation
GO:0007030--P:Golgi organization
GO:0060716--P:labyrinthine layer blood vessel development
GO:0050775--P:positive regulation of dendrite morphogenesis
GO:0060712--P:spongiotrophoblast layer development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001274	Ailuropoda melanoleuca	82.82	0.00e+00	874.00
IUUC-Apl-003239	Anas platyrhynchos	60.71	0.00e+00	641.00
IUUC-Aca-004756	Anolis carolinensis	56.16	1.00e-123	436.00
IUUC-Ame-011198	Astyanax mexicanus	41.72	5.00e-59	221.00
IUUC-Bta-012430	Bos taurus	51.63	1.00e-145	510.00
IUUC-Cfa-021022	Canis familiaris	75.46	0.00e+00	870.00
IUUC-Cpo-021898	Cavia porcellus	75.12	0.00e+00	857.00
IUUC-Csa-023452	Chlorocebus sabaeus	89.61	0.00e+00	1050.00
IUUC-Cho-024759	Choloepus hoffmanni	71.57	0.00e+00	768.00
IUUC-Dre-028123	Danio rerio	42.22	1.00e-139	489.00
IUUC-Dno-029045	Dasypus novemcinctus	84.25	0.00e+00	794.00
IUUC-Dor-030433	Dipodomys ordii	73.09	0.00e+00	708.00
IUUC-Ete-032465	Echinops telfairi	81.08	0.00e+00	690.00
IUUC-Eca-034134	Equus caballus	84.35	0.00e+00	861.00
IUUC-Eeu-035047	Erinaceus europaeus	73.27	0.00e+00	724.00
IUUC-Fca-036574	Felis catus	84.02	0.00e+00	841.00
IUUC-Fal-037665	Ficedula albicollis	57.29	9.00e-162	563.00
IUUC-Gmo-039137	Gadus morhua	43.12	1.00e-65	243.00
IUUC-Gga-040711	Gallus gallus	58.03	0.00e+00	637.00
IUUC-Gac-041675	Gasterosteus aculeatus	47.34	8.00e-45	172.00
IUUC-Ggo-045331	Gorilla gorilla	92.48	0.00e+00	947.00
IUUC-Hsa-046240	Homo sapiens	90.13	0.00e+00	1031.00
IUUC-Itr-048412	Ictidomys tridecemlineatus	84.15	0.00e+00	848.00
IUUC-Loc-052631	Lepisosteus oculatus	48.28	4.00e-161	561.00
IUUC-Laf-054127	Loxodonta africana	67.83	3.00e-50	190.00
IUUC-Mcc-055083	Macaca mulatta	89.97	0.00e+00	1028.00
IUUC-Mga-060113	Meleagris gallopavo	60.81	1.00e-179	622.00
IUUC-Mmr-061780	Microcebus murinus	82.47	0.00e+00	880.00
IUUC-Mdo-063066	Monodelphis domestica	58.89	0.00e+00	678.00
IUUC-Mmu-063524	Mus musculus	78.53	0.00e+00	802.00
IUUC-Mpu-066913	Mustela putorius furo	84.63	0.00e+00	871.00
IUUC-Mlu-067924	Myotis lucifugus	79.90	0.00e+00	880.00
IUUC-Nle-069558	Nomascus leucogenys	88.66	0.00e+00	950.00
IUUC-Opr-070506	Ochotona princeps	82.87	0.00e+00	848.00
IUUC-Ont-071514	Oreochromis niloticus	46.37	3.00e-137	482.00
IUUC-Ocu-074477	Oryctolagus cuniculus	82.89	0.00e+00	825.00
IUUC-Ola-087416	Oryzias latipes	43.49	4.00e-141	494.00
IUUC-Oga-088643	Otolemur garnettii	84.95	0.00e+00	883.00
IUUC-Oar-090172	Ovis aries	82.99	0.00e+00	841.00
IUUC-Ptr-090870	Pan troglodytes	90.62	0.00e+00	1037.00
IUUC-Pan-092017	Papio anubis	88.63	0.00e+00	1036.00
IUUC-Psi-093794	Pelodiscus sinensis	62.42	0.00e+00	632.00
IUUC-Pfo-096192	Poecilia formosa	48.72	2.00e-141	495.00
IUUC-Pab-097882	Pongo abelii	89.61	0.00e+00	1023.00
IUUC-Pca-100902	Procavia capensis	80.12	5.00e-146	511.00
IUUC-Pva-103139	Pteropus vampyrus	80.63	0.00e+00	911.00
IUUC-Rno-105798	Rattus norvegicus	78.53	0.00e+00	816.00
IUUC-Sha-106576	Sarcophilus harrisii	63.11	0.00e+00	643.00
IUUC-Ssc-115923	Sus scrofa	73.66	0.00e+00	871.00
IUUC-Tgu-116667	Taeniopygia guttata	51.47	1.00e-101	363.00
IUUC-Tru-118323	Takifugu rubripes	42.91	6.00e-131	461.00
IUUC-Tsy-118818	Tarsius syrichta	68.11	2.00e-91	329.00
IUUC-Tni-120438	Tetraodon nigroviridis	41.19	7.00e-129	454.00
IUUC-Tbe-127784	Tupaia belangeri	77.67	2.00e-88	318.00
IUUC-Ttr-128288	Tursiops truncatus	69.75	0.00e+00	764.00
IUUC-Vpa-130307	Vicugna pacos	80.53	0.00e+00	748.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence