iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000022418.6	ENSDART00000034004.5	ENSDARP00000037156.4
ENSDARG00000022418.6	ENSDART00000115419.2	ENSDARP00000104417.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.60e-06	27.0	7	47
ULD/UDP/UFD/UBX	1.90e-17	64.5	598	672
ULD/UDP/UBQ/UBQ_Other	7.30e-08	33.1	222	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 1    sededkleqlve.MGF.dreealqaLraannnleaAveyLl 39
           +++e++l+ +++ +G+ +  ea++ L+ +n++l aA++ ++
   Q: 7    MDREMILADFQAcTGIdNIAEAITLLELNNWDLVAAINGVI 47
           689*************9********************9875 PP

ULD/UDP/UFD/UBX

   S: 5    qatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllve 80
            ++l+iR+p+G++l+r+F  + +l+ +++fv+ +++++sd+F+L+++fPrr++++ +    l ea+L+p+++l++e
   Q: 598  ISKLRIRTPSGEFLERRFLGTCKLQVLFDFVA-SKGYPSDEFKLLTTFPRRNITQLDPAWNLVEAKLFPQETLFLE 672
           689*****************************.*************************9**************986 PP

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgs.eltlkvnpsdtVaeLKekiekklgip.peqq 41
           +++ + +   +++l+++ s t++e+K+ i+++++ip ++qq
   Q: 222  LVISHREAQrDYSLNFPASKTIQEVKRNISDLTNIPvRHQQ 262
           667888888899***99999****************77776 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MASDSNMDRE MILADFQACT GIDNIAEAIT LLELNNWDLV AAINGVIPQE NGILQSSFSS 60
EASQTGPYGP HSQSEATAPT PSAPPPSASE SASASASSSS SPPSSSSPAF CPVQPSRHIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTTGA ACGCGATCTA GAACAGCAAA GTGACGATAA CAGAAAACCT GAAAGCCGAC 60
AAACACTGAC AACACGGCCC CGAAGAGCAG CATTCGCACT TAGTTATTTA CCGCACGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR033043--FAF1_UBX
IPR012336--Thioredoxin-like_fold
IPR006577--UAS
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR001012--UBX_dom

PROSITE

PS50053--UBIQUITIN_2
PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00594--UAS
SM00166--UBX

Gene Ontology

GO:0051216--P:cartilage development
GO:0008219--P:cell death
GO:0060037--P:pharyngeal system development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002153	Ailuropoda melanoleuca	76.15	0.00e+00	964.00
IUUC-Apl-004127	Anas platyrhynchos	75.00	0.00e+00	943.00
IUUC-Aca-005188	Anolis carolinensis	75.72	0.00e+00	941.00
IUUC-Ame-010696	Astyanax mexicanus	83.66	0.00e+00	961.00
IUUC-Bta-012965	Bos taurus	76.01	0.00e+00	967.00
IUUC-Cel-018420	Caenorhabditis elegans	29.14	9.00e-28	118.00
IUUC-Cja-019128	Callithrix jacchus	76.15	0.00e+00	970.00
IUUC-Cfa-021201	Canis familiaris	62.97	0.00e+00	744.00
IUUC-Cpo-021475	Cavia porcellus	77.83	0.00e+00	720.00
IUUC-Csa-024076	Chlorocebus sabaeus	76.75	0.00e+00	966.00
IUUC-Cho-025067	Choloepus hoffmanni	66.02	0.00e+00	856.00
IUUC-Cin-025663	Ciona intestinalis	43.22	2.00e-68	252.00
IUUC-Csv-025894	Ciona savignyi	34.57	2.00e-62	233.00
IUUC-Dno-029336	Dasypus novemcinctus	75.26	0.00e+00	957.00
IUUC-Dor-030218	Dipodomys ordii	70.64	0.00e+00	866.00
IUUC-Dme-031581	Drosophila melanogaster	35.29	7.00e-84	305.00
IUUC-Ete-032860	Echinops telfairi	57.20	1.00e-145	510.00
IUUC-Eca-034321	Equus caballus	79.68	0.00e+00	842.00
IUUC-Eeu-034844	Erinaceus europaeus	52.42	6.00e-99	355.00
IUUC-Fca-036575	Felis catus	83.78	4.00e-174	603.00
IUUC-Fal-037128	Ficedula albicollis	75.11	0.00e+00	968.00
IUUC-Gmo-038694	Gadus morhua	82.20	0.00e+00	1016.00
IUUC-Gga-040826	Gallus gallus	75.26	0.00e+00	976.00
IUUC-Gac-042125	Gasterosteus aculeatus	82.67	0.00e+00	1105.00
IUUC-Ggo-045254	Gorilla gorilla	76.45	0.00e+00	966.00
IUUC-Hsa-046722	Homo sapiens	76.45	0.00e+00	966.00
IUUC-Itr-048149	Ictidomys tridecemlineatus	81.61	2.00e-83	301.00
IUUC-Lch-050312	Latimeria chalumnae	68.72	9.00e-178	616.00
IUUC-Loc-051990	Lepisosteus oculatus	83.43	0.00e+00	1019.00
IUUC-Laf-054375	Loxodonta africana	83.82	4.00e-175	607.00
IUUC-Mcc-054627	Macaca mulatta	75.91	0.00e+00	941.00
IUUC-Meu-056611	Macropus eugenii	52.47	1.00e-97	350.00
IUUC-Mga-059400	Meleagris gallopavo	73.58	0.00e+00	958.00
IUUC-Mmr-060882	Microcebus murinus	75.26	0.00e+00	947.00
IUUC-Mdo-061874	Monodelphis domestica	73.92	0.00e+00	971.00
IUUC-Mmu-063444	Mus musculus	75.11	0.00e+00	960.00
IUUC-Mpu-065713	Mustela putorius furo	74.92	0.00e+00	935.00
IUUC-Mlu-068122	Myotis lucifugus	75.49	0.00e+00	934.00
IUUC-Nle-069025	Nomascus leucogenys	75.86	0.00e+00	953.00
IUUC-Opr-071089	Ochotona princeps	67.06	0.00e+00	884.00
IUUC-Ont-072421	Oreochromis niloticus	84.87	0.00e+00	1087.00
IUUC-Oan-073092	Ornithorhynchus anatinus	79.45	0.00e+00	738.00
IUUC-Ola-086497	Oryzias latipes	83.98	0.00e+00	1074.00
IUUC-Oga-088854	Otolemur garnettii	75.56	0.00e+00	969.00
IUUC-Oar-090120	Ovis aries	76.01	0.00e+00	959.00
IUUC-Ptr-091554	Pan troglodytes	76.45	0.00e+00	966.00
IUUC-Pan-091985	Papio anubis	76.30	0.00e+00	956.00
IUUC-Psi-093548	Pelodiscus sinensis	75.08	0.00e+00	930.00
IUUC-Pma-094123	Petromyzon marinus	51.71	1.00e-51	195.00
IUUC-Pfo-096729	Poecilia formosa	84.83	0.00e+00	1087.00
IUUC-Pab-097810	Pongo abelii	76.45	0.00e+00	967.00
IUUC-Pca-101079	Procavia capensis	73.00	0.00e+00	720.00
IUUC-Pva-102534	Pteropus vampyrus	68.56	0.00e+00	719.00
IUUC-Rno-105127	Rattus norvegicus	74.57	0.00e+00	858.00
IUUC-Sha-106667	Sarcophilus harrisii	78.36	0.00e+00	871.00
IUUC-Sar-113424	Sorex araneus	59.06	0.00e+00	636.00
IUUC-Ssc-115974	Sus scrofa	74.47	0.00e+00	921.00
IUUC-Tgu-116495	Taeniopygia guttata	75.11	0.00e+00	970.00
IUUC-Tru-118727	Takifugu rubripes	82.05	0.00e+00	1050.00
IUUC-Tsy-118906	Tarsius syrichta	71.39	0.00e+00	863.00
IUUC-Tni-119717	Tetraodon nigroviridis	82.94	0.00e+00	1050.00
IUUC-Tbe-127849	Tupaia belangeri	60.61	2.00e-160	559.00
IUUC-Ttr-128660	Tursiops truncatus	72.73	0.00e+00	912.00
IUUC-Vpa-130359	Vicugna pacos	75.68	0.00e+00	941.00
IUUC-Xtr-132212	Xenopus tropicalis	72.01	0.00e+00	630.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence