iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000040701.15	ENSMUST00000151314.7	ENSMUSP00000122796.1
ENSMUSG00000040701.15	ENSMUST00000036041.14	ENSMUSP00000043996.8

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLM	PhosphositePlus	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	86.73	0.00e+00	1267.00	IUUC-Hsa-046508

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Mus musculus

Functional Description
(View)

May function in protein sorting in late endosomes or multivesucular bodies (MVBs). Involved in MVB-assisted maturation of hepatitis B virus (HBV).

Protein Sequence
(Fasta)

MVVHSLRLQD LIEEIRGAKT QAQEREVIQK ECAQIRASFR DGDPLQRHRQ LAKLLYVHML 60
GYPAHFGQME CLKLIASPRF TDKRVGYLGA MLLLDERHDS HLLITNSIKN DLSQGNQPVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGAACCGA GCACCAACCC CAGCTCTGTC CCATACCAGG AAGTGCTGGG TGGGGGGTAG 60
AGGAGCAAAG TTGACACCGA AGCCAGGTGA GCTTGGGACT GGGAAACTAG TGCCTTCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0968--Cytoplasmic vesicle
KW-0967--Endosome
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport

Interpro

IPR017107--AP1_complex_gsu
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR002553--Clathrin/coatomer_adapt-like_N
IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like

PROSITE

PS50180--GAE

Pfam

PF01602--Adaptin_N
PF02883--Alpha_adaptinC2

SMART

SM00809--Alpha_adaptinC2

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0030659--C:cytoplasmic vesicle membrane
GO:0010008--C:endosome membrane
GO:0000139--C:Golgi membrane
GO:0005798--C:Golgi-associated vesicle
GO:0016020--C:membrane
GO:0005802--C:trans-Golgi network
GO:0030133--C:transport vesicle
GO:0008565--F:protein transporter activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

mmu:11766

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001927	Ailuropoda melanoleuca	82.93	0.00e+00	1199.00
IUUC-Bta-012396	Bos taurus	83.08	0.00e+00	982.00
IUUC-Cja-019267	Callithrix jacchus	80.36	0.00e+00	981.00
IUUC-Cfa-020381	Canis familiaris	83.96	0.00e+00	1179.00
IUUC-Cpo-021411	Cavia porcellus	83.02	0.00e+00	1136.00
IUUC-Csa-023574	Chlorocebus sabaeus	86.98	0.00e+00	1216.00
IUUC-Dre-028339	Danio rerio	57.94	0.00e+00	901.00
IUUC-Dno-030066	Dasypus novemcinctus	82.98	0.00e+00	1218.00
IUUC-Dor-031086	Dipodomys ordii	85.10	0.00e+00	906.00
IUUC-Eca-033211	Equus caballus	86.47	0.00e+00	1251.00
IUUC-Eeu-034574	Erinaceus europaeus	78.13	0.00e+00	1098.00
IUUC-Ggo-044758	Gorilla gorilla	86.85	0.00e+00	1216.00
IUUC-Hsa-046508	Homo sapiens	86.73	0.00e+00	1206.00
IUUC-Itr-048524	Ictidomys tridecemlineatus	87.86	0.00e+00	1232.00
IUUC-Laf-054160	Loxodonta africana	85.97	0.00e+00	1206.00
IUUC-Mcc-055299	Macaca mulatta	86.98	0.00e+00	1222.00
IUUC-Meu-056526	Macropus eugenii	79.57	0.00e+00	1103.00
IUUC-Mmr-061441	Microcebus murinus	86.47	0.00e+00	1230.00
IUUC-Mdo-062443	Monodelphis domestica	75.24	0.00e+00	1085.00
IUUC-Mpu-065857	Mustela putorius furo	84.63	0.00e+00	1191.00
IUUC-Mlu-067650	Myotis lucifugus	84.70	0.00e+00	1168.00
IUUC-Nle-069751	Nomascus leucogenys	86.60	0.00e+00	1187.00
IUUC-Opr-071071	Ochotona princeps	81.88	0.00e+00	1066.00
IUUC-Ocu-074118	Oryctolagus cuniculus	84.11	0.00e+00	1145.00
IUUC-Oga-087949	Otolemur garnettii	85.46	0.00e+00	1211.00
IUUC-Oar-090094	Ovis aries	84.58	0.00e+00	1228.00
IUUC-Ptr-091184	Pan troglodytes	86.98	0.00e+00	1218.00
IUUC-Pan-092405	Papio anubis	87.23	0.00e+00	1214.00
IUUC-Pab-097941	Pongo abelii	86.98	0.00e+00	1222.00
IUUC-Pca-100934	Procavia capensis	82.68	0.00e+00	1164.00
IUUC-Pva-102188	Pteropus vampyrus	83.56	0.00e+00	761.00
IUUC-Rno-105192	Rattus norvegicus	94.30	0.00e+00	1365.00
IUUC-Tbe-127973	Tupaia belangeri	78.19	2.00e-119	423.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence