iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111009

Ensembl Protein ID

Solyc03g111740.2.1

UniProt Accession

K4BK36; K4BK36_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g111740.2	Solyc03g111740.2.1	Solyc03g111740.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-28	98.7	280	315
UBD/Beta-Prp	1.20e-49	169.9	196	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gH d+v++++    s++++vs+++D tikvWDl +g
   Q: 280  GHMDKVCAVDVskfSSRHVVSAAYDRTIKVWDLQKG 315
           8*******98888766****************9876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           +h++ + ++ f  ++s l++g++d+ ik wd+t+g+l  sl+g+ + v +++  +d k+++ +s+ ++++vwd ++g + htl+gh d+v+
   Q: 196  AHDGGCASIVFEYNSSKLISGGQDRAIKMWDTTSGSLTNSLYGCLGSVLDLSVTHDNKFIIAASSSNNLYVWDANSGRIRHTLTGHMDKVC 286
           57888888999999***************************************************************************** PP
   S: 99   slsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           ++++s+ s+ ++vs+  drti+vwdl++g+c + t   h+   n+++++ d+  + sG+ D+ +rlWd++tgkll +    h ++v+s+s+
   Q: 287  AVDVSKfSSRHVVSAAYDRTIKVWDLQKGYCNN-TIIFHS-NCNSLAFSMDALTICSGHVDGNLRLWDVQTGKLLSEVAA-HSQAVTSVSL 374
           ******999***********************9.444444.4788899999***************************98.********** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsf 275
           ++ng+ +++ ++d+  +l+d++t e+  t++       +n ++   s +d ++  gs Dgs+ iW + +g++++tl+ h ssv +++  s 
   Q: 375  SRNGNMILTSGRDNLHNLFDIRTLEICGTFRSNAnrvaSNWSRSCISADDGYVTAGSVDGSVHIWSVSNGKMVSTLKEHTSSVLCCSW-SG 464
           **********************99999999887744444445555668999************************************9.44 PP
   S: 276  gdnvlvlgsedskvniwk 293
            +n l++ ++ ++v iw+
   Q: 465  LGNPLATSDKSGTVCIWS 482
           577788888889999995 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MPLLWLHSIG LSFCSCGSEW KEKAENLEVE LQQCYKAQAR LSEQLVVEVA ESRASKSLLQ 60
EKETLITDLQ NELNQARDEC SHLTELLAEK TKGLELLMAE HQDLKAQLEA MTLRANNAEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAAAGGTC AAATATGATC TCACTGGGAA CCAGATTGGT TAGATCGTTA TAAAACGGTC 60
GACCCGGCCC GACCAAAAAA CCAAGGTCAG CTGCTACAGA AAAATTGAAT CCATAATTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0000045--P:autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	50.82	5.00e-135	473.00
IUUC-Aml-002242	Ailuropoda melanoleuca	31.63	6.00e-40	158.00
IUUC-Atr-003073	Amborella trichopoda	59.92	2.00e-141	494.00
IUUC-Apl-003384	Anas platyrhynchos	26.74	3.00e-49	189.00
IUUC-Aca-004962	Anolis carolinensis	32.33	7.00e-44	171.00
IUUC-Aly-005435	Arabidopsis lyrata	69.81	0.00e+00	687.00
IUUC-Ath-006948	Arabidopsis thaliana	71.28	0.00e+00	702.00
IUUC-Ame-010915	Astyanax mexicanus	32.35	1.00e-41	162.00
IUUC-Bta-012388	Bos taurus	31.35	1.00e-45	176.00
IUUC-Bdi-014231	Brachypodium distachyon	52.48	4.00e-137	480.00
IUUC-Bol-016174	Brassica oleracea	70.85	0.00e+00	679.00
IUUC-Bra-017165	Brassica rapa	70.70	0.00e+00	692.00
IUUC-Cel-018234	Caenorhabditis elegans	25.19	2.00e-29	122.00
IUUC-Cja-020002	Callithrix jacchus	29.97	9.00e-36	144.00
IUUC-Cfa-020484	Canis familiaris	32.01	2.00e-45	176.00
IUUC-Cpo-022156	Cavia porcellus	30.67	8.00e-43	167.00
IUUC-Csa-024019	Chlorocebus sabaeus	28.17	1.00e-49	190.00
IUUC-Cho-024311	Choloepus hoffmanni	34.13	2.00e-32	133.00
IUUC-Cin-025260	Ciona intestinalis	32.10	4.00e-34	138.00
IUUC-Csv-025836	Ciona savignyi	33.97	3.00e-28	117.00
IUUC-Dre-027702	Danio rerio	33.00	6.00e-46	178.00
IUUC-Dno-029728	Dasypus novemcinctus	31.68	9.00e-45	174.00
IUUC-Dor-030897	Dipodomys ordii	31.33	2.00e-41	163.00
IUUC-Dme-031595	Drosophila melanogaster	31.05	5.00e-39	155.00
IUUC-Ete-032969	Echinops telfairi	31.51	5.00e-44	171.00
IUUC-Eca-034214	Equus caballus	31.75	3.00e-40	158.00
IUUC-Eeu-034537	Erinaceus europaeus	30.36	4.00e-36	145.00
IUUC-Fca-036005	Felis catus	32.01	4.00e-45	175.00
IUUC-Fal-037593	Ficedula albicollis	31.50	1.00e-46	180.00
IUUC-Gmo-039042	Gadus morhua	25.00	1.00e-37	150.00
IUUC-Gga-040986	Gallus gallus	31.33	9.00e-46	177.00
IUUC-Gac-041351	Gasterosteus aculeatus	25.71	1.00e-50	193.00
IUUC-Gma-043452	Glycine max	74.68	0.00e+00	756.00
IUUC-Ggo-045427	Gorilla gorilla	32.01	9.00e-45	174.00
IUUC-Hsa-046632	Homo sapiens	32.01	1.00e-44	174.00
IUUC-Hvu-047655	Hordeum vulgare	53.03	1.00e-115	409.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	27.86	3.00e-49	189.00
IUUC-Lch-050669	Latimeria chalumnae	30.77	3.00e-33	134.00
IUUC-Lpe-051254	Leersia perrieri	54.47	9.00e-141	492.00
IUUC-Loc-052610	Lepisosteus oculatus	32.57	6.00e-48	184.00
IUUC-Laf-053936	Loxodonta africana	31.33	1.00e-44	174.00
IUUC-Mcc-055504	Macaca mulatta	31.68	1.00e-44	173.00
IUUC-Meu-056516	Macropus eugenii	31.15	3.00e-44	172.00
IUUC-Mtr-058062	Medicago truncatula	71.16	0.00e+00	694.00
IUUC-Mga-059777	Meleagris gallopavo	25.15	1.00e-46	180.00
IUUC-Mmr-061298	Microcebus murinus	31.35	1.00e-44	173.00
IUUC-Mdo-062969	Monodelphis domestica	31.02	2.00e-44	172.00
IUUC-Mmu-064076	Mus musculus	31.00	2.00e-44	172.00
IUUC-Mac-065161	Musa acuminata	65.81	0.00e+00	630.00
IUUC-Mpu-066196	Mustela putorius furo	31.68	2.00e-45	176.00
IUUC-Mlu-067651	Myotis lucifugus	31.35	1.00e-44	173.00
IUUC-Nle-069853	Nomascus leucogenys	30.36	1.00e-41	163.00
IUUC-Opr-071039	Ochotona princeps	31.35	3.00e-41	162.00
IUUC-Ont-072489	Oreochromis niloticus	31.91	3.00e-46	179.00
IUUC-Oan-072703	Ornithorhynchus anatinus	31.80	2.00e-44	172.00
IUUC-Ocu-074205	Oryctolagus cuniculus	31.35	3.00e-44	172.00
IUUC-Oba-075619	Oryza barthii	54.26	7.00e-148	516.00
IUUC-Obr-076632	Oryza brachyantha	53.22	2.00e-137	482.00
IUUC-Ogl-077671	Oryza glaberrima	54.26	7.00e-148	516.00
IUUC-Ogu-078052	Oryza glumaepatula	54.47	5.00e-148	516.00
IUUC-Oin-079611	Oryza indica	54.47	6.00e-146	509.00
IUUC-Olo-080408	Oryza longistaminata	54.68	1.00e-134	472.00
IUUC-Ome-081560	Oryza meridionalis	54.47	9.00e-148	516.00
IUUC-Oni-082145	Oryza nivara	54.26	7.00e-148	516.00
IUUC-Opu-083918	Oryza punctata	54.89	4.00e-135	474.00
IUUC-Oru-084858	Oryza rufipogon	54.47	2.00e-145	508.00
IUUC-Osa-086277	Oryza sativa	54.47	4.00e-146	510.00
IUUC-Ola-086964	Oryzias latipes	34.47	6.00e-39	153.00
IUUC-Olu-087622	Ostreococcus lucimarinus	33.52	2.00e-66	245.00
IUUC-Oga-088765	Otolemur garnettii	26.96	4.00e-49	188.00
IUUC-Oar-090231	Ovis aries	31.13	1.00e-38	153.00
IUUC-Ptr-091676	Pan troglodytes	32.01	1.00e-44	174.00
IUUC-Pan-092068	Papio anubis	31.68	1.00e-44	173.00
IUUC-Psi-093367	Pelodiscus sinensis	32.34	6.00e-47	181.00
IUUC-Ppa-095699	Physcomitrella patens	49.89	5.00e-133	467.00
IUUC-Pfo-096067	Poecilia formosa	26.64	7.00e-48	184.00
IUUC-Pab-098111	Pongo abelii	32.01	2.00e-44	172.00
IUUC-Pop-099116	Populus trichocarpa	77.56	0.00e+00	754.00
IUUC-Pca-100680	Procavia capensis	32.74	4.00e-33	135.00
IUUC-Ppe-101790	Prunus persica	74.46	0.00e+00	744.00
IUUC-Pva-102871	Pteropus vampyrus	31.02	4.00e-44	171.00
IUUC-Pgr-103597	Puccinia graminis	28.74	2.00e-27	117.00
IUUC-Rno-106088	Rattus norvegicus	31.33	1.00e-44	174.00
IUUC-Sha-106984	Sarcophilus harrisii	25.53	8.00e-48	184.00
IUUC-Smo-108983	Selaginella moellendorffii	49.47	4.00e-129	454.00
IUUC-Sit-110828	Setaria italica	56.04	2.00e-148	518.00
IUUC-Stu-112370	Solanum tuberosum	96.02	0.00e+00	941.00
IUUC-Sar-113109	Sorex araneus	34.93	6.00e-27	114.00
IUUC-Sbi-114819	Sorghum bicolor	55.83	3.00e-146	511.00
IUUC-Ssc-116241	Sus scrofa	26.12	3.00e-43	169.00
IUUC-Tgu-116576	Taeniopygia guttata	26.80	3.00e-50	192.00
IUUC-Tru-118336	Takifugu rubripes	28.90	2.00e-34	139.00
IUUC-Tsy-119006	Tarsius syrichta	31.79	7.00e-45	174.00
IUUC-Tni-120300	Tetraodon nigroviridis	31.68	2.00e-45	176.00
IUUC-Tca-121002	Theobroma cacao	76.50	0.00e+00	772.00
IUUC-Tae-123139	Triticum aestivum	50.82	2.00e-135	475.00
IUUC-Tur-126463	Triticum urartu	50.82	3.00e-135	474.00
IUUC-Tbe-127631	Tupaia belangeri	31.68	2.00e-44	172.00
IUUC-Ttr-129005	Tursiops truncatus	31.35	1.00e-36	147.00
IUUC-Vvi-130878	Vitis vinifera	75.96	0.00e+00	741.00
IUUC-Xtr-132798	Xenopus tropicalis	28.52	1.00e-33	137.00
IUUC-Xma-133264	Xiphophorus maculatus	26.89	2.00e-48	186.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence