iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132798

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01022282

Gene Name

atg16l1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000013872.3	ENSXETT00000030368.3	ENSXETP00000030368.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	88.8	407	446
UBD/Beta-Prp	3.10e-46	158.1	317	604

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+++v + +f  ++ ++vsGs+D t+k+WDlr+ v++k+
   Q: 407  GHSGKVLSAKFllDNARIVSGSHDRTLKLWDLRSKVCIKT 446
           8***********64489********************985 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtl 90
           ++++h++ +++v fsp+++llatg++d+++k+wdv   ++     sl g +a++t+++f++ g++l+ +s+D + ++w ++++   htl
   Q: 317  SFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWDVIGTDKceaKGSLTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL 405
           6799*******************************9988888899******************************************** PP
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
           +gh+ +vls +f  ++ ++vsGshdrt+++wdl+++ c++++++g +    c  + +++++++sG+ D+++r+Wd+++ + +       
   Q: 406  TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS----CNDIVCTEQCVMSGHFDKKIRFWDISSCTEVVIY--SV 488
           ****************************************9999988....888888889****************544444444..46 PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlq........tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
            + v++l  +s+    v + + +   ++ +         +      +++ +d+++ v fsp++ ++  gs++g++++W++ +g++ +++
   Q: 489  IGIVQCLCASSK----VMCRYRKLTDIVKYLsswssiylSFLSAPGFKCGSDWTR-VIFSPDGSYVSAGSAEGTLYFWNVLTGKVERMF 572
           888888887774....333333333333333222222444444678888888887.889999999999999999999999999999999 PP
   S: 261  qlhnssvisvavlsfgdnvlvlgsedskvniw 292
           ++++ss+i   ++s+++ ++v++++ s+  +w
   Q: 573  SKQHSSSINAVAWSPSGTHVVSVDKGSRGVLW 604
           99999999999999999999999887765555 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MAAGCRGPAC PSWRLHISRE LRRRDREQRQ VFEELISQYK RLLEKSDLQS VLADKLQAEK 60
YEQQSRHDSS PGPDGMRNDM LLQDMAQMRI KHQEELTELH KKRGELAQTV IELNNQMQQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCAG GTTGCCGGGG GCCCGCCTGC CCTTCCTGGA GGCTTCACAT TTCCAGAGAG 60
CTGAGGCGGA GAGACCGGGA GCAGCGGCAG GTGTTTGAGG AGCTCATCTC ACAGTGTAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012284--6PGD_dom_3
IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	23.24	2.00e-25	110.00
IUUC-Aml-002242	Ailuropoda melanoleuca	69.54	0.00e+00	780.00
IUUC-Atr-003073	Amborella trichopoda	28.19	4.00e-24	105.00
IUUC-Apl-003384	Anas platyrhynchos	75.26	0.00e+00	875.00
IUUC-Aca-004962	Anolis carolinensis	72.29	0.00e+00	843.00
IUUC-Aly-005435	Arabidopsis lyrata	33.01	5.00e-38	152.00
IUUC-Ath-006948	Arabidopsis thaliana	32.68	9.00e-38	151.00
IUUC-Ame-010915	Astyanax mexicanus	70.91	2.00e-130	458.00
IUUC-Bta-012388	Bos taurus	72.66	0.00e+00	867.00
IUUC-Bdi-014231	Brachypodium distachyon	24.32	3.00e-30	126.00
IUUC-Bol-016174	Brassica oleracea	32.79	2.00e-38	153.00
IUUC-Bra-017165	Brassica rapa	32.13	1.00e-37	151.00
IUUC-Cel-018234	Caenorhabditis elegans	31.94	8.00e-40	157.00
IUUC-Cja-018898	Callithrix jacchus	69.69	0.00e+00	793.00
IUUC-Cfa-020484	Canis familiaris	73.37	0.00e+00	864.00
IUUC-Cpo-022156	Cavia porcellus	73.11	0.00e+00	846.00
IUUC-Csa-024019	Chlorocebus sabaeus	70.64	0.00e+00	816.00
IUUC-Cho-024311	Choloepus hoffmanni	60.19	0.00e+00	684.00
IUUC-Cin-025260	Ciona intestinalis	34.69	1.00e-82	300.00
IUUC-Csv-025836	Ciona savignyi	39.81	6.00e-35	140.00
IUUC-Dre-027702	Danio rerio	68.40	0.00e+00	805.00
IUUC-Dno-029728	Dasypus novemcinctus	72.02	0.00e+00	872.00
IUUC-Dor-030587	Dipodomys ordii	63.16	1.00e-83	303.00
IUUC-Dme-031595	Drosophila melanogaster	36.77	4.00e-101	362.00
IUUC-Ete-032969	Echinops telfairi	62.13	6.00e-173	600.00
IUUC-Eca-034214	Equus caballus	75.86	0.00e+00	732.00
IUUC-Eeu-034537	Erinaceus europaeus	70.15	0.00e+00	719.00
IUUC-Fca-036005	Felis catus	69.79	0.00e+00	824.00
IUUC-Fal-037593	Ficedula albicollis	72.79	0.00e+00	808.00
IUUC-Gmo-039042	Gadus morhua	59.63	1.00e-177	615.00
IUUC-Gga-040986	Gallus gallus	72.13	0.00e+00	889.00
IUUC-Gac-041351	Gasterosteus aculeatus	67.37	0.00e+00	827.00
IUUC-Gma-043265	Glycine max	26.10	3.00e-41	162.00
IUUC-Ggo-045427	Gorilla gorilla	71.43	0.00e+00	838.00
IUUC-Hsa-046632	Homo sapiens	73.57	0.00e+00	862.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	69.72	0.00e+00	810.00
IUUC-Lch-049439	Latimeria chalumnae	45.85	6.00e-123	434.00
IUUC-Lpe-051254	Leersia perrieri	27.68	2.00e-26	114.00
IUUC-Loc-052610	Lepisosteus oculatus	68.32	0.00e+00	820.00
IUUC-Laf-053936	Loxodonta africana	70.89	0.00e+00	847.00
IUUC-Mcc-055504	Macaca mulatta	69.62	0.00e+00	845.00
IUUC-Meu-056516	Macropus eugenii	68.36	0.00e+00	795.00
IUUC-Mtr-058062	Medicago truncatula	31.37	7.00e-35	141.00
IUUC-Mga-059777	Meleagris gallopavo	72.22	0.00e+00	865.00
IUUC-Mmr-061298	Microcebus murinus	72.34	0.00e+00	848.00
IUUC-Mdo-062969	Monodelphis domestica	73.45	0.00e+00	884.00
IUUC-Mmu-064076	Mus musculus	71.57	0.00e+00	844.00
IUUC-Mac-065161	Musa acuminata	23.99	2.00e-31	130.00
IUUC-Mpu-066196	Mustela putorius furo	71.34	0.00e+00	840.00
IUUC-Mlu-067651	Myotis lucifugus	72.59	0.00e+00	853.00
IUUC-Nle-069853	Nomascus leucogenys	73.25	0.00e+00	858.00
IUUC-Opr-070350	Ochotona princeps	77.02	1.00e-93	337.00
IUUC-Ont-072489	Oreochromis niloticus	66.94	0.00e+00	801.00
IUUC-Oan-072703	Ornithorhynchus anatinus	71.16	0.00e+00	816.00
IUUC-Ocu-074205	Oryctolagus cuniculus	72.29	0.00e+00	850.00
IUUC-Oba-075619	Oryza barthii	25.49	6.00e-31	128.00
IUUC-Obr-076632	Oryza brachyantha	28.33	2.00e-28	120.00
IUUC-Ogl-077671	Oryza glaberrima	25.49	6.00e-31	128.00
IUUC-Ogu-078052	Oryza glumaepatula	25.49	4.00e-31	129.00
IUUC-Oin-079611	Oryza indica	25.36	4.00e-29	122.00
IUUC-Olo-080408	Oryza longistaminata	25.56	4.00e-28	119.00
IUUC-Ome-081560	Oryza meridionalis	25.69	3.00e-31	129.00
IUUC-Oni-082145	Oryza nivara	25.49	6.00e-31	128.00
IUUC-Opu-083918	Oryza punctata	24.89	1.00e-27	117.00
IUUC-Oru-084858	Oryza rufipogon	25.36	5.00e-29	122.00
IUUC-Osa-086277	Oryza sativa	25.36	3.00e-29	122.00
IUUC-Ola-086816	Oryzias latipes	67.03	6.00e-100	356.00
IUUC-Olu-087622	Ostreococcus lucimarinus	27.63	1.00e-28	120.00
IUUC-Oga-088765	Otolemur garnettii	69.93	0.00e+00	795.00
IUUC-Oar-090196	Ovis aries	71.58	0.00e+00	760.00
IUUC-Ptr-091676	Pan troglodytes	73.41	0.00e+00	860.00
IUUC-Pan-092068	Papio anubis	71.59	0.00e+00	840.00
IUUC-Psi-093367	Pelodiscus sinensis	74.67	0.00e+00	863.00
IUUC-Ppa-095699	Physcomitrella patens	31.15	4.00e-31	129.00
IUUC-Pfo-096067	Poecilia formosa	68.39	0.00e+00	795.00
IUUC-Pab-098111	Pongo abelii	71.43	0.00e+00	838.00
IUUC-Pop-099116	Populus trichocarpa	30.62	1.00e-34	141.00
IUUC-Pca-100680	Procavia capensis	62.96	0.00e+00	689.00
IUUC-Ppe-101790	Prunus persica	30.49	1.00e-35	144.00
IUUC-Pva-102871	Pteropus vampyrus	71.86	0.00e+00	803.00
IUUC-Rno-106088	Rattus norvegicus	71.25	0.00e+00	836.00
IUUC-Sha-106984	Sarcophilus harrisii	75.77	0.00e+00	875.00
IUUC-Smo-109404	Selaginella moellendorffii	23.57	2.00e-32	133.00
IUUC-Sit-110828	Setaria italica	25.10	3.00e-35	142.00
IUUC-Sly-111009	Solanum lycopersicum	30.00	3.00e-34	139.00
IUUC-Stu-112370	Solanum tuberosum	30.57	3.00e-35	142.00
IUUC-Sar-113659	Sorex araneus	61.97	1.00e-64	239.00
IUUC-Sbi-114819	Sorghum bicolor	24.32	3.00e-31	129.00
IUUC-Ssc-116241	Sus scrofa	74.25	0.00e+00	853.00
IUUC-Tgu-116576	Taeniopygia guttata	73.86	0.00e+00	884.00
IUUC-Tru-118336	Takifugu rubripes	59.58	0.00e+00	666.00
IUUC-Tsy-119006	Tarsius syrichta	68.68	0.00e+00	787.00
IUUC-Tni-120300	Tetraodon nigroviridis	69.00	0.00e+00	811.00
IUUC-Tca-121002	Theobroma cacao	29.08	3.00e-35	142.00
IUUC-Tae-124868	Triticum aestivum	24.12	5.00e-26	112.00
IUUC-Tur-126463	Triticum urartu	22.85	6.00e-25	108.00
IUUC-Tbe-127631	Tupaia belangeri	76.04	0.00e+00	705.00
IUUC-Ttr-129005	Tursiops truncatus	63.91	3.00e-116	412.00
IUUC-Vpa-130246	Vicugna pacos	66.80	1.00e-173	602.00
IUUC-Vvi-130878	Vitis vinifera	32.58	2.00e-35	143.00
IUUC-Xma-133264	Xiphophorus maculatus	68.61	0.00e+00	805.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence