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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Spo-108357
UUCD1 version UUC-ScP-00165
Ensembl Protein ID SPAC18B11.10.1:pep
UniProt Accession Q09715; Q9USG3; TUP11_SCHPO
Genbank Protein ID CAA90594.1; BAA87072.1
Protein Name Transcriptional repressor tup11
Genbank Nucleotide ID CU329670; AB027768
Gene Name tup11; SPAC18B11.10
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPAC18B11.10 SPAC18B11.10.1 SPAC18B11.10.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAFdbPTM
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-46 152.5 400 437
UBD/Beta-Prp 6.90e-84 279.6 311 609
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
    gH+ ++++l+f ++ +++vsGs+D t ++WD+ tg ++
   Q: 400 GHEQDIYSLDFsHNgRFIVSGSGDRTARLWDVETGQCI 437
    8**********94459*******************996 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae......vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
    +h sv++cvkfs+++++latg+ ++ v+dv+tgk+l +l + ++ v+++ fspdgk+lvtg eDr ik+wdlst k ++++g
   Q: 311 EHPSVVCCVKFSNNGKYLATGC-NQAANVFDVQTGKKLFTLHEESPDpsrdlyVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSG 400
    6899******************.9999**************8888888******************************************* PP
   S: 93 hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
    he++++sl+fs +g ++vsGs drt+r+wd+etgqc+ l++++ v+ ++++p+++ ++ GslD+++r+W++ +g+l+++l+g h++sv
   Q: 401 HEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCIL-KLEIEN-GVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEG-HKESV 487
    *************************************8.666666.578999********************88.*********9.***** PP
   S: 184 yslsfdsngkelvsgsldgtvklwdlq............tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
    ys++f++++ l+sgsld+t+k+w+lq +g c t++ghtd+v+sv++sp++ + +sgs+D+s ++Wdl++g+ t q+
   Q: 488 YSIAFSPDSSILLSGSLDKTIKVWELQatrsvglsaikpEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQG 578
    ****************************999999999999999************************************************ PP
   S: 263 hnssvisvavlsfgdnvlvlgsedskvniwkl 294
    h++svisv++ s++++ +++gs+d +++iw+
   Q: 579 HKNSVISVCF-SPDGRQFASGSGDLRARIWSI 609
    ********99.*******************97 PP
   

Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description



     Interacts with fep1. Binds to histones H3 and H4.
Interacts with fep1. Binds to histones H3 and H4.
Protein Sequence
(Fasta)
MASVEDATKV QEMLDALKAE YNALAHHSFA SKARGNDYES SMIQSQIQEI EAFRKTVDDM 60
YEKQKSIRET YEKDINKLKR ELEELGVEAN TASYRNRGER SELAASNNQV THIDQEHPSQ 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Spo-108357|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGTGCTGCTA CAAACGTTCA AGAACACAAG TTTATTCTTG TACCACAATT CAAGTGTTGC 60
TATTGTTGTA AAAGGGCGTA TATCAATCGG ATTCAGTTTT TGCAATAAGT CTGACTGAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Spo-108357|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR013890--Tscrpt_rep_Tup1_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08581--Tup_N
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0090568--C:nuclear transcriptional repressor complex
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0006342--P:chromatin silencing
GO:0045014--P:negative regulation of transcription by glucose
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG spo:SPAC18B11.10
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ago-007787 Ashbya gossypii 49.32 2.00e-95 340.00
IUUC-Ame-010648 Astyanax mexicanus 30.95 1.00e-35 141.00
IUUC-Bta-012352 Bos taurus 32.53 7.00e-35 139.00
IUUC-Cgl-026593 Colletotrichum gloeosporioides 58.48 1.00e-115 407.00
IUUC-Ete-032871 Echinops telfairi 32.50 2.00e-35 140.00
IUUC-Fox-037829 Fusarium oxysporum 59.70 4.00e-120 423.00
IUUC-Fso-038231 Fusarium solani 41.07 7.00e-65 238.00
IUUC-Gmo-039010 Gadus morhua 30.89 4.00e-36 143.00
IUUC-Ggr-040038 Gaeumannomyces graminis 55.26 5.00e-109 387.00
IUUC-Kpa-049111 Komagataella pastoris 50.59 1.00e-97 348.00
IUUC-Lma-053115 Leptosphaeria maculans 52.87 1.00e-106 378.00
IUUC-Laf-053443 Loxodonta africana 31.03 3.00e-35 139.00
IUUC-Mor-057042 Magnaporthe oryzae 56.84 6.00e-116 409.00
IUUC-Ncr-068753 Neurospora crassa 60.06 2.00e-119 421.00
IUUC-Pma-094319 Petromyzon marinus 28.84 1.00e-31 128.00
IUUC-Pno-095046 Phaeosphaeria nodorum 50.83 6.00e-93 332.00
IUUC-Pte-104272 Pyrenophora teres 53.47 9.00e-110 388.00
IUUC-Pyt-104514 Pyrenophora triticirepentis 53.47 9.00e-110 388.00
IUUC-Sce-106164 Saccharomyces cerevisiae 43.50 1.00e-95 342.00
IUUC-Sja-107934 Schizosaccharomyces japonicus 46.80 1.00e-152 531.00
IUUC-Sar-113309 Sorex araneus 29.59 3.00e-33 134.00
IUUC-Tni-120355 Tetraodon nigroviridis 28.46 3.00e-32 130.00
IUUC-Tre-121975 Trichoderma reesei 58.86 5.00e-119 419.00
IUUC-Tvi-122338 Trichoderma virens 59.16 2.00e-119 421.00
IUUC-Uma-129593 Ustilago maydis 50.73 1.00e-105 375.00
IUUC-Vda-129718 Verticillium dahliae 58.48 1.00e-113 401.00
IUUC-Yli-134621 Yarrowia lipolytica 58.68 3.00e-120 423.00
Created Date 25-Jun-2017

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