iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-19	70.5	551	583

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH + v+ +++ +d + l+s ++D t++vW+++
   Q: 551  GHDGAVSTICWsHDkRWLLSTGRDRTLRVWSVH 583
           8**********988899**************86 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

METPPEMPST DGHTRAIVTE RYVVESKKSA AHVPLACSTQ HCAFPLDGSR LCVWSSKDPS 60
HQLLTLQGHH QLITAVVFGN QIDPLLLCSA SEDYIIMWNV AECREKTLKG LTPRGTILGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACGC CTCCAGAGAT GCCCTCCACT GATGGCCACA CTCGAGCTAT AGTTACAGAA 60
CGATACGTGG TTGAGTCGAA GAAGTCTGCA GCTCATGTTC CACTGGCTTG CAGCACACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm

KEGG

mmu:71682

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002258	Ailuropoda melanoleuca	58.50	0.00e+00	810.00
IUUC-Aca-004807	Anolis carolinensis	51.20	0.00e+00	765.00
IUUC-Bta-013316	Bos taurus	59.89	0.00e+00	863.00
IUUC-Cja-018825	Callithrix jacchus	59.95	0.00e+00	934.00
IUUC-Cfa-020895	Canis familiaris	61.87	0.00e+00	935.00
IUUC-Cpo-022282	Cavia porcellus	61.98	0.00e+00	927.00
IUUC-Csa-023439	Chlorocebus sabaeus	62.50	0.00e+00	935.00
IUUC-Cho-025046	Choloepus hoffmanni	57.43	0.00e+00	630.00
IUUC-Dre-028376	Danio rerio	39.62	2.00e-141	496.00
IUUC-Dno-029649	Dasypus novemcinctus	62.57	0.00e+00	886.00
IUUC-Dor-030824	Dipodomys ordii	57.68	0.00e+00	731.00
IUUC-Eca-033270	Equus caballus	65.19	0.00e+00	997.00
IUUC-Fca-036149	Felis catus	58.58	0.00e+00	869.00
IUUC-Fal-037410	Ficedula albicollis	49.83	1.00e-172	600.00
IUUC-Gmo-038923	Gadus morhua	37.88	1.00e-123	437.00
IUUC-Gga-040974	Gallus gallus	47.69	0.00e+00	670.00
IUUC-Gac-042310	Gasterosteus aculeatus	35.74	7.00e-109	388.00
IUUC-Ggo-044557	Gorilla gorilla	60.41	0.00e+00	932.00
IUUC-Hsa-046312	Homo sapiens	60.85	0.00e+00	942.00
IUUC-Itr-049033	Ictidomys tridecemlineatus	62.05	0.00e+00	891.00
IUUC-Laf-054450	Loxodonta africana	60.20	0.00e+00	850.00
IUUC-Mcc-055807	Macaca mulatta	58.41	0.00e+00	838.00
IUUC-Meu-056116	Macropus eugenii	35.48	1.00e-60	228.00
IUUC-Mga-060088	Meleagris gallopavo	48.64	0.00e+00	674.00
IUUC-Mdo-062857	Monodelphis domestica	56.95	0.00e+00	863.00
IUUC-Mpu-066921	Mustela putorius furo	57.81	0.00e+00	797.00
IUUC-Mlu-067717	Myotis lucifugus	56.13	0.00e+00	744.00
IUUC-Nle-069061	Nomascus leucogenys	49.24	0.00e+00	699.00
IUUC-Opr-070612	Ochotona princeps	70.53	3.00e-75	276.00
IUUC-Ont-072187	Oreochromis niloticus	37.37	2.00e-134	473.00
IUUC-Oan-072701	Ornithorhynchus anatinus	49.49	1.00e-130	459.00
IUUC-Ocu-074602	Oryctolagus cuniculus	61.45	0.00e+00	925.00
IUUC-Ola-086633	Oryzias latipes	36.71	7.00e-131	461.00
IUUC-Oga-088499	Otolemur garnettii	62.73	0.00e+00	945.00
IUUC-Oar-089256	Ovis aries	58.23	0.00e+00	827.00
IUUC-Ptr-091545	Pan troglodytes	57.29	0.00e+00	652.00
IUUC-Pan-092299	Papio anubis	61.40	0.00e+00	937.00
IUUC-Psi-093010	Pelodiscus sinensis	51.33	0.00e+00	762.00
IUUC-Pab-097646	Pongo abelii	51.27	6.00e-175	607.00
IUUC-Pca-100720	Procavia capensis	51.34	1.00e-131	464.00
IUUC-Pva-102808	Pteropus vampyrus	52.19	0.00e+00	696.00
IUUC-Rno-105715	Rattus norvegicus	87.38	0.00e+00	1270.00
IUUC-Sha-107546	Sarcophilus harrisii	54.82	0.00e+00	833.00
IUUC-Sar-113543	Sorex araneus	50.72	0.00e+00	732.00
IUUC-Ssc-116335	Sus scrofa	71.43	3.00e-47	181.00
IUUC-Tgu-117249	Taeniopygia guttata	49.58	0.00e+00	723.00
IUUC-Tsy-119238	Tarsius syrichta	57.43	0.00e+00	672.00
IUUC-Tni-120639	Tetraodon nigroviridis	33.68	5.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence