iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
miRNAMap	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.60e-12	46.8	109	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekks 74
           q++++ ++g++l+l v ++dtV  +K++++  +g+ p +qr+ ++G++L d  +L +++++ ++++ ++++++
   Q: 109  QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHATEGVEPGSQRWFFSGRPLTDKMKLEELKIPKDYVVQVIVSQP 181
           68899****************************************************************9987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTDGQLRSKR DEFWDTAPAF EGRKEIWDAL KAAAHAFESN DHELAQAIID GANITLPHGA 60
LTECYDELGN RYQLPVYCLA PPINMIEEKS DIETLDIPEP PPSSGHESQL RLRLSTGKDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGGAGGAC AACTCGGCGG CCGGATGGCG GCTCGTGGGG CCGGGGAGGG GGACAGCCCC 60
GAGTGCCCCC GACGGGCCCC GCCGCACCCC CAGCCCTTCC CGCGTCGGTA GAGTTGGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032752--UBD
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF16455--UBD
PF00240--ubiquitin

SMART

SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000911	Aegilops tauschii	50.56	3.00e-21	93.60
IUUC-Aml-002013	Ailuropoda melanoleuca	95.26	9.00e-108	382.00
IUUC-Atr-003109	Amborella trichopoda	48.10	8.00e-17	79.00
IUUC-Apl-003537	Anas platyrhynchos	93.16	9.00e-106	375.00
IUUC-Aca-004312	Anolis carolinensis	90.00	6.00e-102	363.00
IUUC-Aly-005398	Arabidopsis lyrata	53.41	6.00e-22	95.50
IUUC-Ath-007276	Arabidopsis thaliana	53.41	6.00e-22	95.50
IUUC-Acl-008129	Aspergillus clavatus	40.23	2.00e-12	66.20
IUUC-Afl-008454	Aspergillus flavus	28.04	1.00e-11	63.90
IUUC-Afu-008981	Aspergillus fumigatus	44.32	5.00e-14	71.60
IUUC-Ani-009295	Aspergillus nidulans	41.86	7.00e-13	68.20
IUUC-Ang-009706	Aspergillus niger	29.13	3.00e-13	68.90
IUUC-Ate-010381	Aspergillus terreus	27.83	5.00e-10	58.20
IUUC-Ame-010674	Astyanax mexicanus	84.27	4.00e-89	320.00
IUUC-Bgr-012138	Blumeria graminis	31.58	4.00e-07	48.50
IUUC-Bta-012859	Bos taurus	95.26	4.00e-108	383.00
IUUC-Bci-013827	Botrytis cinerea	34.07	4.00e-08	51.60
IUUC-Bdi-014755	Brachypodium distachyon	53.41	3.00e-23	100.00
IUUC-Bol-016137	Brassica oleracea	52.27	2.00e-22	97.40
IUUC-Bra-017141	Brassica rapa	52.27	1.00e-22	97.80
IUUC-Cja-019322	Callithrix jacchus	96.84	5.00e-109	386.00
IUUC-Cfa-020136	Canis familiaris	95.26	1.00e-107	382.00
IUUC-Cpo-021942	Cavia porcellus	96.32	3.00e-108	384.00
IUUC-Cre-022622	Chlamydomonas reinhardtii	45.88	1.00e-17	80.50
IUUC-Csa-023767	Chlorocebus sabaeus	96.84	5.00e-109	386.00
IUUC-Cho-025041	Choloepus hoffmanni	78.95	9.00e-80	288.00
IUUC-Csv-026202	Ciona savignyi	52.72	2.00e-52	198.00
IUUC-Cme-027198	Cyanidioschyzon merolae	32.03	1.00e-08	52.40
IUUC-Dre-027483	Danio rerio	83.33	9.00e-90	322.00
IUUC-Dno-029744	Dasypus novemcinctus	94.19	1.00e-85	308.00
IUUC-Dme-032026	Drosophila melanogaster	55.00	6.00e-55	207.00
IUUC-Ete-032349	Echinops telfairi	91.86	4.00e-84	303.00
IUUC-Eca-034220	Equus caballus	95.26	9.00e-108	382.00
IUUC-Eeu-035212	Erinaceus europaeus	91.58	4.00e-104	369.00
IUUC-Fca-036190	Felis catus	95.26	1.00e-107	381.00
IUUC-Fal-036993	Ficedula albicollis	91.01	7.00e-103	366.00
IUUC-Fox-037832	Fusarium oxysporum	25.46	7.00e-12	64.30
IUUC-Gga-041210	Gallus gallus	93.16	8.00e-106	375.00
IUUC-Gac-041553	Gasterosteus aculeatus	75.41	1.00e-77	282.00
IUUC-Gma-043237	Glycine max	53.41	4.00e-22	96.30
IUUC-Ggo-045306	Gorilla gorilla	96.84	4.00e-109	386.00
IUUC-Hsa-046366	Homo sapiens	96.84	5.00e-109	386.00
IUUC-Hvu-047469	Hordeum vulgare	52.27	8.00e-23	98.60
IUUC-Itr-048466	Ictidomys tridecemlineatus	96.32	3.00e-108	383.00
IUUC-Lch-050222	Latimeria chalumnae	94.74	6.00e-107	379.00
IUUC-Lpe-051415	Leersia perrieri	48.86	4.00e-20	90.50
IUUC-Loc-052330	Lepisosteus oculatus	91.05	2.00e-103	368.00
IUUC-Lma-053022	Leptosphaeria maculans	34.15	2.00e-08	52.40
IUUC-Laf-054326	Loxodonta africana	96.32	2.00e-108	384.00
IUUC-Mcc-055871	Macaca mulatta	96.84	5.00e-109	386.00
IUUC-Meu-056699	Macropus eugenii	87.89	1.00e-96	345.00
IUUC-Mor-056914	Magnaporthe oryzae	33.66	2.00e-07	49.70
IUUC-Mtr-058114	Medicago truncatula	55.68	8.00e-17	78.60
IUUC-Mmr-061414	Microcebus murinus	96.84	3.00e-109	387.00
IUUC-Mdo-062051	Monodelphis domestica	93.68	7.00e-106	376.00
IUUC-Mmu-064256	Mus musculus	97.89	4.00e-110	390.00
IUUC-Mac-064699	Musa acuminata	52.27	3.00e-22	96.30
IUUC-Mpu-066187	Mustela putorius furo	95.26	7.00e-108	382.00
IUUC-Mlu-068186	Myotis lucifugus	94.21	4.00e-107	380.00
IUUC-Nfi-068559	Neosartorya fischeri	44.32	3.00e-14	72.40
IUUC-Nle-069488	Nomascus leucogenys	96.84	4.00e-109	386.00
IUUC-Opr-071115	Ochotona princeps	92.63	3.00e-103	367.00
IUUC-Ont-071496	Oreochromis niloticus	70.16	1.00e-74	272.00
IUUC-Ocu-074225	Oryctolagus cuniculus	96.32	6.00e-109	385.00
IUUC-Oba-075372	Oryza barthii	51.19	9.00e-21	90.90
IUUC-Obr-076560	Oryza brachyantha	51.19	2.00e-20	90.90
IUUC-Ogl-077415	Oryza glaberrima	50.00	3.00e-20	90.10
IUUC-Ogu-078202	Oryza glumaepatula	51.19	9.00e-21	90.90
IUUC-Oin-079839	Oryza indica	50.00	3.00e-20	90.10
IUUC-Olo-080965	Oryza longistaminata	48.86	1.00e-15	74.30
IUUC-Ome-081760	Oryza meridionalis	50.00	3.00e-20	90.10
IUUC-Oni-082835	Oryza nivara	51.19	9.00e-21	90.90
IUUC-Opu-083929	Oryza punctata	51.14	2.00e-20	91.70
IUUC-Oru-084682	Oryza rufipogon	51.19	9.00e-21	90.90
IUUC-Osa-085899	Oryza sativa	50.00	3.00e-20	90.10
IUUC-Ola-086769	Oryzias latipes	70.68	5.00e-76	277.00
IUUC-Olu-087730	Ostreococcus lucimarinus	33.73	9.00e-10	55.80
IUUC-Oga-088348	Otolemur garnettii	96.34	1.00e-107	382.00
IUUC-Oar-089998	Ovis aries	93.68	3.00e-106	377.00
IUUC-Ptr-090886	Pan troglodytes	96.84	5.00e-109	386.00
IUUC-Pan-092886	Papio anubis	96.84	5.00e-109	386.00
IUUC-Psi-092936	Pelodiscus sinensis	91.53	2.00e-103	367.00
IUUC-Pma-094754	Petromyzon marinus	63.69	4.00e-56	210.00
IUUC-Pno-095024	Phaeosphaeria nodorum	22.22	2.00e-06	45.80
IUUC-Ppa-095162	Physcomitrella patens	52.87	7.00e-21	92.00
IUUC-Pfo-097343	Poecilia formosa	71.73	2.00e-77	281.00
IUUC-Pab-097647	Pongo abelii	96.84	5.00e-109	386.00
IUUC-Pca-100773	Procavia capensis	95.26	2.00e-107	380.00
IUUC-Pva-103069	Pteropus vampyrus	93.16	6.00e-104	369.00
IUUC-Pte-104152	Pyrenophora teres	32.88	9.00e-05	42.70
IUUC-Pyt-104589	Pyrenophora triticirepentis	32.88	5.00e-06	45.10
IUUC-Sha-107112	Sarcophilus harrisii	93.16	1.00e-105	375.00
IUUC-Spo-108250	Schizosaccharomyces pombe	24.63	2.00e-06	46.20
IUUC-Smo-109567	Selaginella moellendorffii	51.14	6.00e-22	95.10
IUUC-Sit-109843	Setaria italica	51.14	2.00e-21	94.40
IUUC-Sly-111092	Solanum lycopersicum	54.55	7.00e-22	95.10
IUUC-Stu-112412	Solanum tuberosum	53.41	2.00e-21	93.60
IUUC-Sar-113626	Sorex araneus	87.79	4.00e-67	246.00
IUUC-Sbi-114467	Sorghum bicolor	45.45	1.00e-18	85.10
IUUC-Ssc-115412	Sus scrofa	94.74	2.00e-107	380.00
IUUC-Tgu-116739	Taeniopygia guttata	92.63	5.00e-105	372.00
IUUC-Tru-118325	Takifugu rubripes	71.88	5.00e-78	283.00
IUUC-Tsy-118987	Tarsius syrichta	62.11	1.00e-57	215.00
IUUC-Tni-119770	Tetraodon nigroviridis	70.53	1.00e-73	269.00
IUUC-Tvi-122404	Trichoderma virens	27.31	1.00e-06	47.00
IUUC-Tae-124023	Triticum aestivum	52.27	7.00e-23	99.00
IUUC-Tur-126425	Triticum urartu	56.72	4.00e-16	78.20
IUUC-Tbe-127835	Tupaia belangeri	92.63	2.00e-103	367.00
IUUC-Ttr-128256	Tursiops truncatus	95.26	6.00e-108	383.00
IUUC-Vda-129803	Verticillium dahliae	34.38	2.00e-07	50.40
IUUC-Vpa-130225	Vicugna pacos	87.60	1.00e-63	234.00
IUUC-Xtr-131959	Xenopus tropicalis	92.11	6.00e-104	369.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence