iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108808

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein DDB1-2

Genbank Nucleotide ID

GL377594

Gene Name

DDB1-2; SELMODRAFT_151061

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_151061	EFJ23079	EFJ23079

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	79.82	0.00e+00	1833.00	IUUC-Ath-006658
E3 adaptor/Cullin RING/DCX/DDB1	33.07	0.00e+00	632.00	IUUC-Cel-018239
E3 adaptor/Cullin RING/DCX/DDB1	46.15	0.00e+00	1009.00	IUUC-Dme-031940

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSVWNYVVTA HKPTNVTHSC VGNFTSPHEL NLIIAKCTRI EFHLLTAQGL QPLLDVPIYG 60
RIATLELFRP PGETQDVLFV STERYKFCVL QWDSETTELV TRAMGDVSDR IGRPTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGTCT GGAATTACGT CGTCACTGCG CACAAGCCAA CCAATGTGAC GCACTCGTGC 60
GTTGGAAATT TCACGAGCCC CCACGAGCTC AATCTCATCA TCGCGTAAGT CCCTGTTTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

KEGG

smo:SELMODRAFT_151061

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	72.81	0.00e+00	1712.00
IUUC-Aml-002096	Ailuropoda melanoleuca	52.53	0.00e+00	1211.00
IUUC-Atr-002742	Amborella trichopoda	81.74	0.00e+00	1861.00
IUUC-Apl-003624	Anas platyrhynchos	51.94	0.00e+00	1170.00
IUUC-Aca-005085	Anolis carolinensis	52.58	0.00e+00	1206.00
IUUC-Aly-005857	Arabidopsis lyrata	79.82	0.00e+00	1834.00
IUUC-Ath-006658	Arabidopsis thaliana	79.82	0.00e+00	1833.00
IUUC-Ame-011643	Astyanax mexicanus	46.98	0.00e+00	1019.00
IUUC-Bgr-012164	Blumeria graminis	29.27	1.00e-125	443.00
IUUC-Bta-012494	Bos taurus	52.53	0.00e+00	1210.00
IUUC-Bci-013957	Botrytis cinerea	29.65	5.00e-117	415.00
IUUC-Bdi-014186	Brachypodium distachyon	76.47	0.00e+00	1751.00
IUUC-Bol-015922	Brassica oleracea	79.08	0.00e+00	1812.00
IUUC-Bra-017300	Brassica rapa	79.08	0.00e+00	1806.00
IUUC-Cel-018239	Caenorhabditis elegans	32.95	5.00e-179	621.00
IUUC-Cfa-020406	Canis familiaris	52.53	0.00e+00	1211.00
IUUC-Cpo-022154	Cavia porcellus	52.53	0.00e+00	1210.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	50.35	0.00e+00	1011.00
IUUC-Cho-024554	Choloepus hoffmanni	48.49	6.00e-139	488.00
IUUC-Cin-025466	Ciona intestinalis	48.70	0.00e+00	1084.00
IUUC-Csv-026370	Ciona savignyi	47.16	0.00e+00	964.00
IUUC-Dre-027448	Danio rerio	52.59	9.00e-168	582.00
IUUC-Dno-029794	Dasypus novemcinctus	52.73	0.00e+00	1151.00
IUUC-Dor-030789	Dipodomys ordii	45.28	9.00e-122	430.00
IUUC-Dse-031491	Dothistroma septosporum	31.01	5.00e-138	484.00
IUUC-Dme-031940	Drosophila melanogaster	46.15	0.00e+00	993.00
IUUC-Eca-033777	Equus caballus	52.27	0.00e+00	1202.00
IUUC-Eeu-034900	Erinaceus europaeus	49.58	9.00e-168	583.00
IUUC-Fca-035869	Felis catus	52.53	0.00e+00	1211.00
IUUC-Fal-036777	Ficedula albicollis	52.22	0.00e+00	1197.00
IUUC-Fso-038292	Fusarium solani	28.18	2.00e-129	456.00
IUUC-Gmo-038815	Gadus morhua	46.69	7.00e-153	533.00
IUUC-Ggr-039907	Gaeumannomyces graminis	28.12	1.00e-123	437.00
IUUC-Gga-040995	Gallus gallus	52.45	0.00e+00	1207.00
IUUC-Gac-042390	Gasterosteus aculeatus	52.42	0.00e+00	1139.00
IUUC-Gma-042904	Glycine max	81.01	0.00e+00	1796.00
IUUC-Ggo-044891	Gorilla gorilla	52.31	0.00e+00	1206.00
IUUC-Hvu-047504	Hordeum vulgare	76.08	0.00e+00	1738.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	52.62	0.00e+00	1211.00
IUUC-Lch-050565	Latimeria chalumnae	52.53	0.00e+00	1200.00
IUUC-Loc-052091	Lepisosteus oculatus	48.33	0.00e+00	824.00
IUUC-Laf-053502	Loxodonta africana	52.36	0.00e+00	1206.00
IUUC-Mcc-054802	Macaca mulatta	53.05	0.00e+00	1200.00
IUUC-Meu-056808	Macropus eugenii	54.02	0.00e+00	800.00
IUUC-Mla-059154	Melampsora laricipopulina	26.45	5.00e-96	345.00
IUUC-Mga-059824	Meleagris gallopavo	52.18	0.00e+00	1124.00
IUUC-Mvi-060279	Microbotryum violaceum	29.65	2.00e-127	449.00
IUUC-Mmr-061215	Microcebus murinus	52.27	0.00e+00	1199.00
IUUC-Mdo-062028	Monodelphis domestica	50.46	0.00e+00	963.00
IUUC-Mmu-064327	Mus musculus	52.53	0.00e+00	1210.00
IUUC-Mac-065445	Musa acuminata	80.92	0.00e+00	1816.00
IUUC-Mpu-065814	Mustela putorius furo	50.70	0.00e+00	1147.00
IUUC-Mlu-067136	Myotis lucifugus	52.53	0.00e+00	1204.00
IUUC-Opr-070915	Ochotona princeps	51.20	0.00e+00	905.00
IUUC-Ont-071753	Oreochromis niloticus	52.88	0.00e+00	1201.00
IUUC-Oan-073187	Ornithorhynchus anatinus	53.04	0.00e+00	1099.00
IUUC-Ocu-074619	Oryctolagus cuniculus	52.53	0.00e+00	1212.00
IUUC-Oba-075091	Oryza barthii	72.93	0.00e+00	1176.00
IUUC-Obr-076425	Oryza brachyantha	76.68	0.00e+00	1750.00
IUUC-Ogu-078794	Oryza glumaepatula	76.81	0.00e+00	1756.00
IUUC-Oin-079725	Oryza indica	75.94	0.00e+00	1723.00
IUUC-Olo-080842	Oryza longistaminata	73.72	0.00e+00	1578.00
IUUC-Ome-081818	Oryza meridionalis	76.90	0.00e+00	1758.00
IUUC-Oni-082879	Oryza nivara	76.17	0.00e+00	1736.00
IUUC-Opu-083361	Oryza punctata	75.77	0.00e+00	1748.00
IUUC-Oru-084781	Oryza rufipogon	76.81	0.00e+00	1756.00
IUUC-Osa-086293	Oryza sativa	76.81	0.00e+00	1756.00
IUUC-Ola-086881	Oryzias latipes	52.61	0.00e+00	1195.00
IUUC-Olu-087674	Ostreococcus lucimarinus	55.91	0.00e+00	1184.00
IUUC-Oga-089056	Otolemur garnettii	52.53	0.00e+00	1210.00
IUUC-Oar-089457	Ovis aries	53.14	0.00e+00	1200.00
IUUC-Psi-093407	Pelodiscus sinensis	52.48	0.00e+00	1182.00
IUUC-Pma-094272	Petromyzon marinus	52.53	0.00e+00	1100.00
IUUC-Pno-094864	Phaeosphaeria nodorum	30.73	7.00e-135	474.00
IUUC-Ppa-095885	Physcomitrella patens	83.93	0.00e+00	1871.00
IUUC-Pfo-096083	Poecilia formosa	52.93	0.00e+00	1204.00
IUUC-Pop-099593	Populus trichocarpa	80.00	0.00e+00	1776.00
IUUC-Pca-100189	Procavia capensis	50.59	0.00e+00	674.00
IUUC-Ppe-101987	Prunus persica	79.82	0.00e+00	1749.00
IUUC-Pva-102605	Pteropus vampyrus	52.36	0.00e+00	1205.00
IUUC-Pte-104233	Pyrenophora teres	31.48	8.00e-146	510.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	31.85	2.00e-142	499.00
IUUC-Rno-106004	Rattus norvegicus	52.53	0.00e+00	1211.00
IUUC-Sha-106726	Sarcophilus harrisii	51.30	0.00e+00	1089.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	25.80	5.00e-94	338.00
IUUC-Sit-109735	Setaria italica	77.05	0.00e+00	1758.00
IUUC-Sly-111520	Solanum lycopersicum	78.92	0.00e+00	1791.00
IUUC-Sar-113606	Sorex araneus	50.41	2.00e-67	250.00
IUUC-Sbi-114539	Sorghum bicolor	74.50	0.00e+00	1732.00
IUUC-Sre-114936	Sporisorium reilianum	24.75	8.00e-66	245.00
IUUC-Ssc-116038	Sus scrofa	52.45	0.00e+00	1207.00
IUUC-Tgu-117512	Taeniopygia guttata	52.19	0.00e+00	1197.00
IUUC-Tru-117593	Takifugu rubripes	52.40	0.00e+00	1187.00
IUUC-Tsy-119513	Tarsius syrichta	49.68	2.00e-177	615.00
IUUC-Tni-120551	Tetraodon nigroviridis	49.11	0.00e+00	946.00
IUUC-Tre-122136	Trichoderma reesei	28.10	3.00e-118	419.00
IUUC-Tvi-122512	Trichoderma virens	28.75	5.00e-126	444.00
IUUC-Tae-122891	Triticum aestivum	76.26	0.00e+00	1740.00
IUUC-Tur-126451	Triticum urartu	75.58	0.00e+00	1551.00
IUUC-Tme-127057	Tuber melanosporum	30.68	1.00e-127	450.00
IUUC-Ttr-128891	Tursiops truncatus	50.45	0.00e+00	761.00
IUUC-Vda-129870	Verticillium dahliae	28.31	1.00e-116	414.00
IUUC-Vpa-130117	Vicugna pacos	48.92	0.00e+00	907.00
IUUC-Vvi-131033	Vitis vinifera	80.73	0.00e+00	1824.00
IUUC-Xtr-131987	Xenopus tropicalis	51.83	0.00e+00	1169.00
IUUC-Xma-134117	Xiphophorus maculatus	52.18	0.00e+00	1176.00
IUUC-Zma-134758	Zea mays	76.72	0.00e+00	1763.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence