iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015682

Ensembl Protein ID

Bo8g038080.1

UniProt Accession

A0A0D3DLS6; A0A0D3DLS6_BRAOL

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g038080	Bo8g038080.1	Bo8g038080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	4.80e-15	57.0	117	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskks 75
           +vkvs++g+++++++dl+ ++++++L +a+++ +                         ++ se+ + YeD+dGD++ l++D+++ ++++      s
   Q: 117  FVKVSMDGAPYLRKVDLKMYTSYKELSDALAKmFSsftmgsygaqgmidfmneskvmdLVNSSEYVPSYEDKDGDWM-LVGDVPWPMFIE------S 206
           8*******************************62256699****************977777***************.************......* PP
   S: 76   llrlliqk 83
            +rl+i+k
   Q: 207  WKRLRIMK 214
           ******98 PP

Organism

Brassica oleracea

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEQLINLKET ELCLGLPGGP DPVETPTKSC LRNKRGFSEI VELKLGLHST KQGSVDLNVA 60
GAPKEKTLHK DPSKPPAKAQ VVGWPPVRNY RKSVMTHQKC SEVEEASSDR GGGTVAFVKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCAGT TGATTAACCT AAAGGAAACG GAGCTCTGTC TTGGCCTCCC TGGAGGCCCA 60
GATCCCGTGG AGACTCCAAC CAAGTCATGT CTGAGGAACA AGAGAGGCTT CTCTGAGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0010102--P:lateral root morphogenesis
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005852	Arabidopsis lyrata	84.65	3.00e-105	374.00
IUUC-Ath-006635	Arabidopsis thaliana	84.40	3.00e-100	357.00
IUUC-Bra-017218	Brassica rapa	97.42	7.00e-134	468.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence