iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071587

Ensembl Protein ID

ENSONIP00000006678.1

UniProt Accession

I3JCT8; I3JCT8_ORENI

Genbank Protein ID

ENSONIP00000006678

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01027179

Gene Name

sec13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000005309.1	ENSONIT00000006683.1	ENSONIP00000006678.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-28	98.3	55	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +   ++l+s+s+D ++ +W 
   Q: 55   GHEGPVWQVAWahPMfgNILASCSYDRKVIIWK 87
           8***********9666699*************7 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

QVSVINTVDT SHEDMIHDAQ MDYYGTRLAT CSSDRTVKIF DVRNGGQILV ADLRGHEGPV 60
WQVAWAHPMF GNILASCSYD RKVIIWKEEN GSWDKMYEYT GHESSVNSVC WGPYEFGLIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTTTCCG TCATTAACAC CGTGGACACC TCTCATGAGG ACATGATTGT AAGTTTTCCA 60
GTTTTTTTCC CCTTTTTTAT TTAACCCAAA CTAGTTGCTA ATCACAGCTG ATGTTAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0051216--P:cartilage development
GO:0055123--P:digestive system development
GO:0007029--P:endoplasmic reticulum organization
GO:0070278--P:extracellular matrix constituent secretion
GO:0042462--P:eye photoreceptor cell development
GO:0001889--P:liver development
GO:0036372--P:opsin transport
GO:0010842--P:retina layer formation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	52.81	7.00e-90	323.00
IUUC-Aml-001832	Ailuropoda melanoleuca	87.23	1.00e-170	592.00
IUUC-Atr-002914	Amborella trichopoda	55.52	3.00e-92	331.00
IUUC-Apl-003992	Anas platyrhynchos	87.54	4.00e-163	567.00
IUUC-Aca-005283	Anolis carolinensis	88.44	1.00e-172	598.00
IUUC-Aly-005654	Arabidopsis lyrata	54.67	2.00e-89	322.00
IUUC-Ath-006816	Arabidopsis thaliana	54.67	8.00e-89	320.00
IUUC-Ago-007827	Ashbya gossypii	51.49	1.00e-83	302.00
IUUC-Acl-008205	Aspergillus clavatus	53.16	6.00e-84	303.00
IUUC-Afl-008748	Aspergillus flavus	52.12	2.00e-85	308.00
IUUC-Afu-008791	Aspergillus fumigatus	52.16	7.00e-83	300.00
IUUC-Ani-009152	Aspergillus nidulans	51.79	3.00e-86	311.00
IUUC-Ang-009765	Aspergillus niger	52.12	2.00e-86	312.00
IUUC-Aor-009927	Aspergillus oryzae	52.00	2.00e-82	298.00
IUUC-Ate-010248	Aspergillus terreus	52.44	2.00e-86	311.00
IUUC-Ame-011478	Astyanax mexicanus	90.94	3.00e-176	610.00
IUUC-Bgr-012276	Blumeria graminis	51.37	6.00e-82	297.00
IUUC-Bta-012700	Bos taurus	87.23	5.00e-170	590.00
IUUC-Bci-013722	Botrytis cinerea	51.00	8.00e-84	303.00
IUUC-Bdi-014818	Brachypodium distachyon	53.47	3.00e-90	325.00
IUUC-Bol-015779	Brassica oleracea	55.37	2.00e-89	322.00
IUUC-Bra-016973	Brassica rapa	55.89	2.00e-91	330.00
IUUC-Cel-018479	Caenorhabditis elegans	40.89	1.00e-67	250.00
IUUC-Cja-019956	Callithrix jacchus	87.46	2.00e-154	538.00
IUUC-Cfa-020752	Canis familiaris	87.23	5.00e-171	593.00
IUUC-Cpo-021871	Cavia porcellus	85.67	1.00e-168	585.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	55.96	5.00e-97	347.00
IUUC-Csa-023393	Chlorocebus sabaeus	86.92	9.00e-171	592.00
IUUC-Cho-024786	Choloepus hoffmanni	67.91	7.00e-121	427.00
IUUC-Cin-025332	Ciona intestinalis	69.38	2.00e-131	461.00
IUUC-Csv-025926	Ciona savignyi	67.43	4.00e-127	447.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	52.56	2.00e-81	295.00
IUUC-Cne-027054	Cryptococcus neoformans	48.94	2.00e-78	286.00
IUUC-Cme-027165	Cyanidioschyzon merolae	35.80	2.00e-49	191.00
IUUC-Dre-027782	Danio rerio	92.19	8.00e-178	615.00
IUUC-Dno-029628	Dasypus novemcinctus	86.65	5.00e-171	593.00
IUUC-Dor-030650	Dipodomys ordii	71.34	4.00e-131	460.00
IUUC-Dse-031206	Dothistroma septosporum	50.16	5.00e-82	297.00
IUUC-Dme-031854	Drosophila melanogaster	59.41	9.00e-103	366.00
IUUC-Ete-032618	Echinops telfairi	61.18	7.00e-109	386.00
IUUC-Eca-033268	Equus caballus	87.85	1.00e-171	595.00
IUUC-Fca-035918	Felis catus	87.23	1.00e-170	592.00
IUUC-Fal-037551	Ficedula albicollis	86.64	2.00e-152	531.00
IUUC-Fox-037763	Fusarium oxysporum	50.66	8.00e-84	303.00
IUUC-Fso-038341	Fusarium solani	50.49	5.00e-83	300.00
IUUC-Gmo-038638	Gadus morhua	95.64	0.00e+00	635.00
IUUC-Ggr-039865	Gaeumannomyces graminis	50.50	2.00e-81	295.00
IUUC-Gga-040193	Gallus gallus	87.50	2.00e-170	591.00
IUUC-Gma-044311	Glycine max	55.18	2.00e-91	329.00
IUUC-Ggo-045252	Gorilla gorilla	86.60	3.00e-170	590.00
IUUC-Hsa-046565	Homo sapiens	86.29	1.00e-169	588.00
IUUC-Hvu-047835	Hordeum vulgare	54.13	9.00e-92	330.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	86.29	3.00e-169	587.00
IUUC-Kpa-049148	Komagataella pastoris	52.65	2.00e-85	309.00
IUUC-Lch-050421	Latimeria chalumnae	90.94	2.00e-175	608.00
IUUC-Lpe-051187	Leersia perrieri	52.15	5.00e-91	330.00
IUUC-Loc-052167	Lepisosteus oculatus	92.83	8.00e-179	619.00
IUUC-Lma-053250	Leptosphaeria maculans	52.01	6.00e-82	297.00
IUUC-Laf-054304	Loxodonta africana	86.60	1.00e-169	588.00
IUUC-Mcc-055519	Macaca mulatta	86.60	4.00e-170	590.00
IUUC-Meu-056439	Macropus eugenii	87.19	1.00e-172	598.00
IUUC-Mor-057241	Magnaporthe oryzae	51.37	3.00e-81	295.00
IUUC-Mpo-057373	Magnaporthe poae	45.76	9.00e-67	246.00
IUUC-Mtr-058412	Medicago truncatula	55.18	8.00e-90	323.00
IUUC-Mla-058966	Melampsora laricipopulina	49.85	2.00e-87	315.00
IUUC-Mga-060066	Meleagris gallopavo	87.54	4.00e-163	567.00
IUUC-Mvi-060290	Microbotryum violaceum	47.13	4.00e-80	294.00
IUUC-Mmr-060717	Microcebus murinus	86.60	9.00e-170	589.00
IUUC-Mdo-062496	Monodelphis domestica	87.50	5.00e-173	600.00
IUUC-Mmu-063490	Mus musculus	86.60	5.00e-170	590.00
IUUC-Mac-065307	Musa acuminata	55.63	7.00e-89	320.00
IUUC-Mpu-066601	Mustela putorius furo	87.23	5.00e-171	593.00
IUUC-Mlu-067501	Myotis lucifugus	87.23	8.00e-171	592.00
IUUC-Nfi-068360	Neosartorya fischeri	50.75	4.00e-68	251.00
IUUC-Ncr-068928	Neurospora crassa	50.33	1.00e-84	306.00
IUUC-Nle-069028	Nomascus leucogenys	86.29	6.00e-170	590.00
IUUC-Opr-070446	Ochotona princeps	86.60	5.00e-162	563.00
IUUC-Oan-073211	Ornithorhynchus anatinus	86.25	4.00e-171	593.00
IUUC-Ocu-074306	Oryctolagus cuniculus	85.05	1.00e-165	575.00
IUUC-Oba-075069	Oryza barthii	53.47	1.00e-90	326.00
IUUC-Obr-076667	Oryza brachyantha	53.80	2.00e-91	328.00
IUUC-Ogl-077208	Oryza glaberrima	53.47	1.00e-90	326.00
IUUC-Ogu-078513	Oryza glumaepatula	53.47	1.00e-90	326.00
IUUC-Oin-079094	Oryza indica	53.47	1.00e-90	326.00
IUUC-Olo-080473	Oryza longistaminata	53.47	1.00e-90	326.00
IUUC-Ome-081643	Oryza meridionalis	53.47	1.00e-90	326.00
IUUC-Oni-082589	Oryza nivara	53.47	1.00e-90	326.00
IUUC-Opu-083677	Oryza punctata	53.47	1.00e-90	326.00
IUUC-Oru-084537	Oryza rufipogon	53.47	1.00e-90	326.00
IUUC-Osa-085449	Oryza sativa	53.47	1.00e-90	326.00
IUUC-Ola-087226	Oryzias latipes	97.81	0.00e+00	645.00
IUUC-Olu-087893	Ostreococcus lucimarinus	52.40	4.00e-80	291.00
IUUC-Oga-088837	Otolemur garnettii	86.29	6.00e-170	590.00
IUUC-Oar-089594	Ovis aries	86.92	7.00e-170	589.00
IUUC-Ptr-091132	Pan troglodytes	86.92	2.00e-170	591.00
IUUC-Psi-093568	Pelodiscus sinensis	87.62	3.00e-164	570.00
IUUC-Pma-094172	Petromyzon marinus	73.89	6.00e-65	239.00
IUUC-Pno-094955	Phaeosphaeria nodorum	50.66	3.00e-81	295.00
IUUC-Ppa-095578	Physcomitrella patens	55.78	4.00e-91	327.00
IUUC-Pfo-096063	Poecilia formosa	98.12	0.00e+00	645.00
IUUC-Pab-098674	Pongo abelii	86.60	1.00e-169	588.00
IUUC-Pop-099402	Populus trichocarpa	54.85	1.00e-90	326.00
IUUC-Pca-100824	Procavia capensis	69.16	1.00e-128	452.00
IUUC-Ppe-101707	Prunus persica	55.18	9.00e-89	320.00
IUUC-Pva-103161	Pteropus vampyrus	82.24	4.00e-161	560.00
IUUC-Pgr-103573	Puccinia graminis	53.87	2.00e-89	322.00
IUUC-Ptt-103700	Puccinia triticina	51.41	5.00e-82	297.00
IUUC-Pte-104267	Pyrenophora teres	50.68	3.00e-79	288.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	49.66	5.00e-72	264.00
IUUC-Rno-104833	Rattus norvegicus	86.92	3.00e-170	590.00
IUUC-Sce-106437	Saccharomyces cerevisiae	50.50	1.00e-76	279.00
IUUC-Sha-106611	Sarcophilus harrisii	87.19	1.00e-172	598.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	49.67	1.00e-82	299.00
IUUC-Spo-108362	Schizosaccharomyces pombe	50.83	2.00e-85	308.00
IUUC-Smo-109674	Selaginella moellendorffii	55.12	2.00e-93	335.00
IUUC-Sit-110132	Setaria italica	53.80	1.00e-91	329.00
IUUC-Sly-111852	Solanum lycopersicum	52.98	2.00e-86	311.00
IUUC-Stu-112195	Solanum tuberosum	53.31	7.00e-87	313.00
IUUC-Sbi-114229	Sorghum bicolor	53.64	8.00e-92	330.00
IUUC-Sre-114898	Sporisorium reilianum	50.29	2.00e-92	332.00
IUUC-Ssc-115995	Sus scrofa	86.75	4.00e-78	283.00
IUUC-Tgu-116793	Taeniopygia guttata	87.54	1.00e-160	558.00
IUUC-Tru-117797	Takifugu rubripes	96.88	0.00e+00	642.00
IUUC-Tsy-118967	Tarsius syrichta	96.30	8.00e-26	111.00
IUUC-Tni-120366	Tetraodon nigroviridis	97.51	0.00e+00	649.00
IUUC-Tca-121068	Theobroma cacao	55.29	3.00e-89	321.00
IUUC-Tre-121899	Trichoderma reesei	50.00	2.00e-83	301.00
IUUC-Tvi-122380	Trichoderma virens	50.50	9.00e-84	303.00
IUUC-Tae-123998	Triticum aestivum	54.79	9.00e-93	333.00
IUUC-Tur-126202	Triticum urartu	54.13	7.00e-92	330.00
IUUC-Tme-127181	Tuber melanosporum	54.22	1.00e-90	326.00
IUUC-Ttr-128448	Tursiops truncatus	75.39	1.00e-142	499.00
IUUC-Uma-129661	Ustilago maydis	50.58	6.00e-93	334.00
IUUC-Vda-129666	Verticillium dahliae	52.90	7.00e-82	296.00
IUUC-Vpa-130318	Vicugna pacos	87.54	5.00e-171	593.00
IUUC-Vvi-130868	Vitis vinifera	54.85	4.00e-90	324.00
IUUC-Xtr-131859	Xenopus tropicalis	87.81	8.00e-170	589.00
IUUC-Xma-133898	Xiphophorus maculatus	98.44	0.00e+00	647.00
IUUC-Yli-134559	Yarrowia lipolytica	52.38	4.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence